| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFSDIVVNGKVLVPKVSGWQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKLGDTENPTTPQHDTADVRVNYSFDPKQTQLFIVGCEPPTGEHWDIAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYVRAGPDGHPLPDAPPPSPLYTKPPPSSPYAVRPPYDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPKPNVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:02)
[INFO] Main: Simulation completed successfully. (00:00:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9428 | |
| 2 | L | A | 1.9633 | |
| 3 | P | A | 0.6601 | |
| 4 | P | A | 0.3825 | |
| 5 | T | A | 0.1333 | |
| 6 | T | A | 0.1409 | |
| 7 | P | A | 0.1807 | |
| 8 | V | A | 1.2350 | |
| 9 | A | A | 0.0916 | |
| 10 | K | A | -1.0045 | |
| 11 | V | A | -0.1349 | |
| 12 | Q | A | -1.3827 | |
| 13 | S | A | -1.5418 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4191 | |
| 16 | E | A | -2.4378 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4596 | |
| 20 | P | A | 0.1282 | |
| 21 | T | A | 0.1794 | |
| 22 | S | A | -0.0980 | |
| 23 | L | A | 0.0887 | |
| 24 | F | A | -0.0323 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.2891 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.9019 | |
| 31 | R | A | -2.6865 | |
| 32 | L | A | -0.8004 | |
| 33 | L | A | 1.1550 | |
| 34 | T | A | 1.3565 | |
| 35 | V | A | 1.7955 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | 0.1872 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | 0.1171 | |
| 40 | S | A | -0.1171 | |
| 41 | D | A | 0.0499 | |
| 42 | I | A | 1.8118 | |
| 43 | V | A | 2.4801 | |
| 44 | V | A | 1.6933 | |
| 45 | N | A | -0.5337 | |
| 46 | G | A | -0.3430 | |
| 47 | K | A | -0.1135 | |
| 48 | V | A | 2.2100 | |
| 49 | L | A | 2.5604 | |
| 50 | V | A | 1.6841 | |
| 51 | P | A | 0.6435 | |
| 52 | K | A | -0.1231 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | W | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1512 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4025 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2750 | |
| 70 | K | A | -1.7933 | |
| 71 | F | A | -0.6443 | |
| 72 | A | A | -0.5806 | |
| 73 | L | A | -0.8690 | |
| 74 | P | A | -1.2080 | |
| 75 | Q | A | -2.5055 | |
| 76 | K | A | -3.1095 | |
| 77 | D | A | -2.9903 | |
| 78 | F | A | -1.6715 | |
| 79 | Y | A | -1.8896 | |
| 80 | D | A | -2.6863 | |
| 81 | P | A | -2.3647 | |
| 82 | E | A | -3.0532 | |
| 83 | K | A | -3.3963 | |
| 84 | E | A | -2.4620 | |
| 85 | R | A | -1.2978 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6631 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9749 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3675 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.7013 | |
| 99 | G | A | -0.5411 | |
| 100 | P | A | -0.4140 | |
| 101 | L | A | 0.0237 | |
| 102 | G | A | -0.2442 | |
| 103 | K | A | -0.6495 | |
| 104 | G | A | -0.4165 | |
| 105 | T | A | -0.3831 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | -0.0914 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | -0.1569 | |
| 110 | L | A | 0.0651 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.1023 | |
| 113 | K | A | -0.4253 | |
| 114 | L | A | -0.8670 | |
| 115 | G | A | -0.7317 | |
| 116 | D | A | -1.1250 | |
| 117 | T | A | -0.8025 | |
| 118 | E | A | -1.6759 | |
| 119 | N | A | -1.9429 | |
| 120 | P | A | -1.4281 | |
| 121 | T | A | -0.8106 | |
| 122 | T | A | -0.6098 | |
| 123 | P | A | -0.1706 | |
| 124 | Q | A | -0.6941 | |
| 125 | H | A | -0.8654 | |
| 126 | D | A | -1.8207 | |
| 127 | T | A | -1.1243 | |
| 128 | A | A | -1.2908 | |
| 129 | D | A | -1.9359 | |
| 130 | V | A | -1.0824 | |
| 131 | R | A | -0.9755 | |
| 132 | V | A | -0.2647 | |
| 133 | N | A | -0.8990 | |
| 134 | Y | A | -0.4210 | |
| 135 | S | A | -0.3546 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | 0.0000 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | -0.2295 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5590 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2055 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1339 | |
| 157 | D | A | 0.2937 | |
| 158 | I | A | 0.8231 | |
| 159 | A | A | 0.1132 | |
| 160 | E | A | -1.4829 | |
| 161 | P | A | -0.2245 | |
| 162 | C | A | 0.1951 | |
| 163 | P | A | -0.1620 | |
| 164 | G | A | -0.0628 | |
| 165 | L | A | 0.6333 | |
| 166 | P | A | -0.0962 | |
| 167 | P | A | -0.3313 | |
| 168 | G | A | -0.4190 | |
| 169 | A | A | -0.0201 | |
| 170 | C | A | 0.7438 | |
| 171 | P | A | 0.5594 | |
| 172 | P | A | 0.6954 | |
| 173 | I | A | 2.0526 | |
| 174 | Q | A | 0.8680 | |
| 175 | L | A | 1.4673 | |
| 176 | V | A | 0.8484 | |
| 177 | N | A | -0.2942 | |
| 178 | S | A | 0.0264 | |
| 179 | V | A | 0.4264 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3797 | |
| 182 | D | A | 0.0758 | |
| 183 | G | A | -0.1592 | |
| 184 | D | A | -0.5413 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1361 | |
| 190 | F | A | 0.0659 | |
| 191 | G | A | -0.0985 | |
| 192 | N | A | -0.2601 | |
| 193 | M | A | -0.1255 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.3742 | |
| 197 | E | A | -2.6075 | |
| 198 | L | A | -1.2130 | |
| 199 | Q | A | -2.5349 | |
| 200 | Q | A | -3.3053 | |
| 201 | D | A | -3.5846 | |
| 202 | R | A | -3.3197 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.4410 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3537 | |
| 211 | S | A | -1.7089 | |
| 212 | T | A | -1.4366 | |
| 213 | R | A | -2.0865 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1562 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3352 | |
| 220 | L | A | 0.5925 | |
| 221 | K | A | -1.1295 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.8229 | |
| 224 | N | A | -1.5008 | |
| 225 | E | A | -1.2429 | |
| 226 | A | A | -0.5979 | |
| 227 | Y | A | -0.3683 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6622 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | 0.0768 | |
| 234 | F | A | 0.2601 | |
| 235 | G | A | -0.8262 | |
| 236 | R | A | -2.6274 | |
| 237 | R | A | -2.9356 | |
| 238 | E | A | -2.2117 | |
| 239 | Q | A | -0.1881 | |
| 240 | V | A | 1.4703 | |
| 241 | Y | A | 1.2239 | |
| 242 | A | A | 0.3774 | |
| 243 | R | A | -0.6136 | |
| 244 | H | A | -0.7401 | |
| 245 | F | A | 0.1911 | |
| 246 | Y | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | -0.6412 | |
| 249 | A | A | -1.0796 | |
| 250 | G | A | -1.2172 | |
| 251 | P | A | -1.1156 | |
| 252 | D | A | -1.2840 | |
| 253 | G | A | -1.2695 | |
| 254 | H | A | -1.4180 | |
| 255 | P | A | -1.2364 | |
| 256 | L | A | -0.4596 | |
| 257 | P | A | -0.9257 | |
| 258 | D | A | -1.9831 | |
| 259 | A | A | 0.0000 | |
| 260 | P | A | -1.2034 | |
| 261 | P | A | -1.0345 | |
| 262 | P | A | -0.4991 | |
| 263 | S | A | -0.4452 | |
| 264 | P | A | 0.3942 | |
| 265 | L | A | 1.1562 | |
| 266 | Y | A | 0.2507 | |
| 267 | T | A | -0.8772 | |
| 268 | K | A | -1.9382 | |
| 269 | P | A | -0.7571 | |
| 270 | P | A | -0.7599 | |
| 271 | P | A | -0.3447 | |
| 272 | S | A | -0.1343 | |
| 273 | S | A | 0.0736 | |
| 274 | P | A | 0.3254 | |
| 275 | Y | A | 0.9083 | |
| 276 | A | A | 0.5980 | |
| 277 | V | A | 1.3418 | |
| 278 | R | A | -0.1393 | |
| 279 | P | A | -0.4725 | |
| 280 | P | A | -0.5809 | |
| 281 | Y | A | -0.1797 | |
| 282 | D | A | -0.5938 | |
| 283 | Y | A | 1.0123 | |
| 284 | F | A | 0.7707 | |
| 285 | G | A | 0.3269 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9816 | |
| 291 | L | A | 1.6064 | |
| 292 | V | A | 0.5735 | |
| 293 | S | A | -0.1605 | |
| 294 | S | A | -0.9642 | |
| 295 | D | A | -1.8432 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1195 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6554 | |
| 301 | R | A | -1.8872 | |
| 302 | P | A | -0.9915 | |
| 303 | F | A | -0.2021 | |
| 304 | W | A | -0.5676 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0855 | |
| 307 | R | A | -2.8337 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.2630 | |
| 310 | G | A | -1.2266 | |
| 311 | N | A | -1.2665 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.8092 | |
| 319 | N | A | -0.8514 | |
| 320 | E | A | -1.0335 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3588 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.0896 | |
| 333 | N | A | 0.5677 | |
| 334 | F | A | 1.7805 | |
| 335 | T | A | 0.7657 | |
| 336 | I | A | 0.4436 | |
| 337 | S | A | -0.8077 | |
| 338 | Q | A | -1.4387 | |
| 339 | Q | A | -1.0451 | |
| 340 | L | A | 0.6108 | |
| 341 | C | A | -0.0388 | |
| 342 | T | A | -0.4274 | |
| 343 | P | A | -1.1294 | |
| 344 | K | A | -1.5994 | |
| 345 | P | A | -0.8516 | |
| 346 | N | A | -0.7093 | |
| 347 | V | A | 1.3081 | |
| 348 | Y | A | 1.2350 | |
| 349 | D | A | 0.0497 | |
| 350 | P | A | -0.3329 | |
| 351 | S | A | -0.2619 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.5491 | |
| 354 | K | A | -1.6318 | |
| 355 | N | A | -1.6919 | |
| 356 | Y | A | -0.0984 | |
| 357 | L | A | 0.6362 | |
| 358 | R | A | 0.9623 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.3743 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0839 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -2.0579 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6904 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3033 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3140 | |
| 376 | L | A | -1.7105 | |
| 377 | D | A | -1.9874 | |
| 378 | P | A | -1.0359 | |
| 379 | G | A | -1.0103 | |
| 380 | V | A | -0.9268 | |
| 381 | L | A | -0.5237 | |
| 382 | A | A | -0.6472 | |
| 383 | H | A | -0.7936 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.3900 | |
| 386 | T | A | -0.5377 | |
| 387 | M | A | -0.2886 | |
| 388 | N | A | -0.8545 | |
| 389 | P | A | -1.2335 | |
| 390 | T | A | -1.4367 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.4411 | |
| 393 | E | A | -2.7762 | |
| 394 | N | A | -2.3565 | |
| 395 | W | A | -1.3853 | |
| 396 | N | A | -1.1524 | |
| 397 | L | A | -0.2183 | |
| 398 | G | A | 0.4980 | |
| 399 | F | A | 2.4088 | |
| 400 | V | A | 1.8085 | |
| 401 | P | A | 0.0364 | |
| 402 | P | A | -1.8056 | |
| 403 | K | A | -3.3138 | |
| 404 | E | A | -3.7578 | |
| 405 | R | A | -3.8713 | |
| 406 | E | A | -3.7680 | |
| 407 | D | A | -2.8463 | |
| 408 | P | A | -1.7533 | |
| 409 | Y | A | -0.9786 | |
| 410 | K | A | -2.1142 | |
| 411 | G | A | -0.6282 | |
| 412 | L | A | 0.6846 | |
| 413 | I | A | 1.5879 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3973 | |
| 416 | E | A | -1.7016 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9555 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0593 | |
| 421 | E | A | -2.7889 | |
| 422 | R | A | -2.6451 | |
| 423 | F | A | -1.2881 | |
| 424 | S | A | -1.4746 | |
| 425 | Q | A | -1.8583 | |
| 426 | D | A | -2.8964 | |
| 427 | L | A | -1.9849 | |
| 428 | D | A | -2.7680 | |
| 429 | Q | A | -2.6126 | |
| 430 | F | A | -1.4213 | |
| 431 | A | A | -0.8967 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.5856 | |
| 435 | K | A | -0.7063 | |
| 436 | F | A | 0.1381 | |
| 437 | L | A | 1.0254 | |
| 438 | Y | A | 0.8256 | |
| 439 | Q | A | -0.2745 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine