| Chain sequence(s) |
A: DVQLVESGGGSVQAGGSLRLSCAVSGSTYSPCTTGWYRQAPGKEREWVCSISSPGTIYYQDSVKGRFTCSRDNAKNTVYLQMNSLQREDTGMYYCQIQCGVRSIREYWGQGTQVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:48)
[INFO] Main: Simulation completed successfully. (00:01:49)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | D | A | -2.1218 | |
| 2 | V | A | -1.4556 | |
| 3 | Q | A | -1.1923 | |
| 4 | L | A | 0.0000 | |
| 5 | V | A | 0.7707 | |
| 6 | E | A | 0.0000 | |
| 7 | S | A | -0.5428 | |
| 8 | G | A | -1.2451 | |
| 9 | G | A | -1.2095 | |
| 10 | G | A | -0.9360 | |
| 11 | S | A | -0.7026 | |
| 12 | V | A | -0.8768 | |
| 13 | Q | A | -1.7604 | |
| 14 | A | A | -1.8837 | |
| 15 | G | A | -1.4245 | |
| 16 | G | A | -0.9647 | |
| 17 | S | A | -1.1504 | |
| 18 | L | A | -1.1344 | |
| 19 | R | A | -2.1403 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.4731 | |
| 22 | C | A | 0.0000 | |
| 23 | A | A | -0.2443 | |
| 24 | V | A | -0.5938 | |
| 25 | S | A | -1.0585 | |
| 26 | G | A | -1.2538 | |
| 27 | S | A | -0.5362 | |
| 28 | T | A | -0.1062 | |
| 29 | Y | A | 1.1124 | |
| 30 | S | A | 0.4779 | |
| 31 | P | A | 0.1132 | |
| 32 | C | A | -0.0744 | |
| 33 | T | A | -0.3602 | |
| 34 | T | A | 0.0000 | |
| 35 | G | A | 0.0000 | |
| 36 | W | A | 0.0000 | |
| 37 | Y | A | -0.1800 | |
| 38 | R | A | -1.0677 | |
| 39 | Q | A | -1.9633 | |
| 40 | A | A | -2.0092 | |
| 41 | P | A | -1.6245 | |
| 42 | G | A | -1.9453 | |
| 43 | K | A | -3.2443 | |
| 44 | E | A | -3.3097 | |
| 45 | R | A | -2.2930 | |
| 46 | E | A | -1.2928 | |
| 47 | W | A | -0.0498 | |
| 48 | V | A | 0.0000 | |
| 49 | C | A | 0.0000 | |
| 50 | S | A | 0.5289 | |
| 51 | I | A | 0.0000 | |
| 52 | S | A | 0.0551 | |
| 53 | S | A | -0.3140 | |
| 54 | P | A | -0.3681 | |
| 55 | G | A | -0.2418 | |
| 56 | T | A | 0.3786 | |
| 57 | I | A | 1.2640 | |
| 58 | Y | A | 0.9714 | |
| 59 | Y | A | -0.2767 | |
| 60 | Q | A | -1.2730 | |
| 61 | D | A | -2.4631 | |
| 62 | S | A | -1.9022 | |
| 63 | V | A | 0.0000 | |
| 64 | K | A | -2.5759 | |
| 65 | G | A | -1.8132 | |
| 66 | R | A | -1.4590 | |
| 67 | F | A | 0.0000 | |
| 68 | T | A | -0.6452 | |
| 69 | C | A | 0.0000 | |
| 70 | S | A | -0.5670 | |
| 71 | R | A | -1.6266 | |
| 72 | D | A | -2.2125 | |
| 73 | N | A | -2.5161 | |
| 74 | A | A | -1.8742 | |
| 75 | K | A | -2.7049 | |
| 76 | N | A | -2.3614 | |
| 77 | T | A | -1.4149 | |
| 78 | V | A | 0.0000 | |
| 79 | Y | A | -0.7344 | |
| 80 | L | A | 0.0000 | |
| 81 | Q | A | -1.2154 | |
| 82 | M | A | 0.0000 | |
| 83 | N | A | -1.3289 | |
| 84 | S | A | -1.0949 | |
| 85 | L | A | 0.0000 | |
| 86 | Q | A | -2.6439 | |
| 87 | R | A | -3.3282 | |
| 88 | E | A | -3.0037 | |
| 89 | D | A | 0.0000 | |
| 90 | T | A | -1.5939 | |
| 91 | G | A | 0.0000 | |
| 92 | M | A | -0.6655 | |
| 93 | Y | A | 0.0000 | |
| 94 | Y | A | -0.1707 | |
| 95 | C | A | 0.0000 | |
| 96 | Q | A | 0.0000 | |
| 97 | I | A | 0.0000 | |
| 98 | Q | A | -0.8115 | |
| 99 | C | A | 0.0000 | |
| 100 | G | A | 0.3297 | |
| 101 | V | A | 0.9756 | |
| 102 | R | A | -0.8607 | |
| 103 | S | A | -0.3377 | |
| 104 | I | A | 0.5108 | |
| 105 | R | A | -1.7416 | |
| 106 | E | A | -1.8224 | |
| 107 | Y | A | -0.9852 | |
| 108 | W | A | -0.1459 | |
| 109 | G | A | -0.1455 | |
| 110 | Q | A | -0.9088 | |
| 111 | G | A | 0.0000 | |
| 112 | T | A | -0.7991 | |
| 113 | Q | A | -1.3722 | |
| 114 | V | A | 0.0000 | |
| 115 | T | A | -1.1949 | |
| 116 | V | A | 0.0000 | |
| 117 | S | A | -1.4521 | |
| 118 | S | A | -1.1358 |