Project name: query_structure

Status: done

Started: 2026-03-17 01:27:20
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Chain sequence(s) A: VSSVPTKLEVVAATPTSLLISWDAPAVTVVFYLITYGETGASSWPGYQEFTVPGSKSTATISGLKPGVDYTITVYAQYPWDTGSPISINYRT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:39)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:39)
Show buried residues

Minimal score value
-2.5526
Maximal score value
1.782
Average score
-0.3615
Total score value
-33.2536

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 V A 1.7820
2 S A 0.7837
3 S A 0.3248
4 V A 0.3787
5 P A 0.0000
6 T A -1.2214
7 K A -2.2304
8 L A -1.4299
9 E A -1.7503
10 V A 0.0757
11 V A 1.5053
12 A A 0.8374
13 A A 0.2575
14 T A -0.3728
15 P A -1.1297
16 T A -1.0049
17 S A -0.5707
18 L A 0.0000
19 L A 0.5837
20 I A 0.0000
21 S A -0.7407
22 W A 0.0000
23 D A -1.5988
24 A A -0.7478
25 P A 0.2733
26 A A 0.5442
27 V A 0.8632
28 T A 0.5022
29 V A 0.6164
30 V A 1.6092
31 F A 0.9145
32 Y A 0.0000
33 L A 0.3506
34 I A 0.0000
35 T A 0.0000
36 Y A -0.6418
37 G A 0.0000
38 E A -1.6121
39 T A -1.2010
40 G A -0.8440
41 A A -0.4843
42 S A -0.3006
43 S A 0.0201
44 W A 0.7777
45 P A 0.1601
46 G A -0.1591
47 Y A -0.3855
48 Q A -1.1795
49 E A -1.2816
50 F A -0.2260
51 T A 0.1445
52 V A 0.0000
53 P A -0.2416
54 G A 0.0232
55 S A -0.7797
56 K A -1.9134
57 S A -1.1316
58 T A -0.6530
59 A A 0.0000
60 T A 0.1744
61 I A 0.0000
62 S A -0.6812
63 G A -1.0295
64 L A 0.0000
65 K A -2.3783
66 P A -1.6490
67 G A -1.4404
68 V A -1.4258
69 D A -2.0989
70 Y A 0.0000
71 T A -0.9720
72 I A 0.0000
73 T A 0.0000
74 V A 0.0000
75 Y A 0.5244
76 A A 0.0000
77 Q A 0.2183
78 Y A 0.0000
79 P A 0.2552
80 W A 0.3211
81 D A -1.2525
82 T A -0.5329
83 G A -0.3844
84 S A -0.2740
85 P A 0.1016
86 I A 0.1105
87 S A -0.3202
88 I A -0.6903
89 N A -1.7555
90 Y A -1.5054
91 R A -2.5526
92 T A -1.5120
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Laboratory of Theory of Biopolymers 2018