| Chain sequence(s) |
B: SAELKEAIDRMEKAAAIAEQWAKEHPELAEHLAKMKAFYEAKKQEWEAVM
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:41)
[INFO] Main: Simulation completed successfully. (00:01:41)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | B | -1.1439 | |
| 2 | A | B | -1.7970 | |
| 3 | E | B | -2.8774 | |
| 4 | L | B | -2.1787 | |
| 5 | K | B | -3.5611 | |
| 6 | E | B | -3.8817 | |
| 7 | A | B | -3.0096 | |
| 8 | I | B | 0.0000 | |
| 9 | D | B | -4.2632 | |
| 10 | R | B | -3.9723 | |
| 11 | M | B | -2.8579 | |
| 12 | E | B | -3.4515 | |
| 13 | K | B | -3.0283 | |
| 14 | A | B | -1.6497 | |
| 15 | A | B | -1.3792 | |
| 16 | A | B | -0.9943 | |
| 17 | I | B | 0.1109 | |
| 18 | A | B | 0.0000 | |
| 19 | E | B | -1.6662 | |
| 20 | Q | B | -1.4612 | |
| 21 | W | B | -0.9554 | |
| 22 | A | B | -2.3649 | |
| 23 | K | B | -3.1066 | |
| 24 | E | B | -3.2409 | |
| 25 | H | B | -2.9349 | |
| 26 | P | B | -2.5753 | |
| 27 | E | B | -2.8361 | |
| 28 | L | B | -2.1916 | |
| 29 | A | B | -2.7799 | |
| 30 | E | B | -3.0938 | |
| 31 | H | B | -2.5696 | |
| 32 | L | B | 0.0000 | |
| 33 | A | B | -1.7292 | |
| 34 | K | B | -2.1645 | |
| 35 | M | B | -1.0263 | |
| 36 | K | B | -1.3899 | |
| 37 | A | B | -0.6921 | |
| 38 | F | B | 0.4448 | |
| 39 | Y | B | -1.4662 | |
| 40 | E | B | -2.4480 | |
| 41 | A | B | -1.5541 | |
| 42 | K | B | -1.9347 | |
| 43 | K | B | -2.7214 | |
| 44 | Q | B | -2.8813 | |
| 45 | E | B | -2.4949 | |
| 46 | W | B | -1.5208 | |
| 47 | E | B | -1.8893 | |
| 48 | A | B | -0.5336 | |
| 49 | V | B | 1.1959 | |
| 50 | M | B | 0.6043 |