| Chain sequence(s) |
A: GTIFDCGETCFLGTCYTPGCSCGNYGFCYGTNG
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:06)
[INFO] Main: Simulation completed successfully. (00:00:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.8346 | |
| 2 | T | A | 0.2839 | |
| 3 | I | A | 1.6745 | |
| 4 | F | A | 1.5228 | |
| 5 | D | A | -0.8413 | |
| 6 | C | A | 0.1529 | |
| 7 | G | A | 0.1324 | |
| 8 | E | A | 0.5135 | |
| 9 | T | A | 1.4346 | |
| 10 | C | A | 0.0000 | |
| 11 | F | A | 2.8026 | |
| 12 | L | A | 2.4310 | |
| 13 | G | A | 1.0708 | |
| 14 | T | A | 1.0814 | |
| 15 | C | A | 1.1891 | |
| 16 | Y | A | 1.1841 | |
| 17 | T | A | 0.2383 | |
| 18 | P | A | -0.1688 | |
| 19 | G | A | -0.8111 | |
| 20 | C | A | -0.0880 | |
| 21 | S | A | 0.3788 | |
| 22 | C | A | 1.1883 | |
| 23 | G | A | 0.5954 | |
| 24 | N | A | -0.2881 | |
| 25 | Y | A | 1.3043 | |
| 26 | G | A | 1.6680 | |
| 27 | F | A | 2.1084 | |
| 28 | C | A | 0.0000 | |
| 29 | Y | A | 1.0125 | |
| 30 | G | A | 0.0000 | |
| 31 | T | A | -1.0266 | |
| 32 | N | A | -1.9676 | |
| 33 | G | A | -1.2573 |