| Chain sequence(s) |
A: MQANSGSCEVVEASPTSLQLSWDAFHRYHNGFTHPVRYYRLTYGCTGGNSPVQEFTVPGSKSTATLSGLKPGCDYTLTVYAVTWYPRYGYGESGPLSCNYRTELDKPSQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:56)
[INFO] Main: Simulation completed successfully. (00:00:56)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.4068 | |
| 2 | Q | A | -0.7447 | |
| 3 | A | A | -0.5543 | |
| 4 | N | A | -0.8990 | |
| 5 | S | A | -0.7984 | |
| 6 | G | A | -1.1474 | |
| 7 | S | A | -1.1488 | |
| 8 | C | A | -1.2687 | |
| 9 | E | A | -2.0628 | |
| 10 | V | A | 0.0000 | |
| 11 | V | A | -0.2003 | |
| 12 | E | A | -1.6161 | |
| 13 | A | A | -1.4442 | |
| 14 | S | A | -1.6614 | |
| 15 | P | A | -1.9929 | |
| 16 | T | A | -1.1875 | |
| 17 | S | A | -1.2049 | |
| 18 | L | A | 0.0000 | |
| 19 | Q | A | -1.2089 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -1.1655 | |
| 22 | W | A | 0.0000 | |
| 23 | D | A | -1.9457 | |
| 24 | A | A | -1.2255 | |
| 25 | F | A | 0.0000 | |
| 26 | H | A | -1.0119 | |
| 27 | R | A | -0.3514 | |
| 28 | Y | A | 0.8127 | |
| 29 | H | A | -0.0005 | |
| 30 | N | A | -0.6912 | |
| 31 | G | A | 0.0388 | |
| 32 | F | A | 1.3719 | |
| 33 | T | A | 0.5807 | |
| 34 | H | A | 0.0553 | |
| 35 | P | A | -0.4697 | |
| 36 | V | A | -1.1161 | |
| 37 | R | A | -1.4391 | |
| 38 | Y | A | -0.9445 | |
| 39 | Y | A | 0.0000 | |
| 40 | R | A | -0.9196 | |
| 41 | L | A | 0.0000 | |
| 42 | T | A | -0.6692 | |
| 43 | Y | A | -0.3410 | |
| 44 | G | A | -0.4327 | |
| 45 | C | A | 0.0000 | |
| 46 | T | A | -0.8621 | |
| 47 | G | A | -1.0386 | |
| 48 | G | A | -1.1040 | |
| 49 | N | A | -1.4096 | |
| 50 | S | A | -0.7477 | |
| 51 | P | A | -0.3067 | |
| 52 | V | A | 0.4243 | |
| 53 | Q | A | -1.1655 | |
| 54 | E | A | -1.8483 | |
| 55 | F | A | -0.7801 | |
| 56 | T | A | -0.2803 | |
| 57 | V | A | 0.0000 | |
| 58 | P | A | -0.9993 | |
| 59 | G | A | -1.2238 | |
| 60 | S | A | -1.1991 | |
| 61 | K | A | -1.5934 | |
| 62 | S | A | -1.0830 | |
| 63 | T | A | -0.8932 | |
| 64 | A | A | 0.0000 | |
| 65 | T | A | -0.4941 | |
| 66 | L | A | 0.0000 | |
| 67 | S | A | -0.7516 | |
| 68 | G | A | -0.9029 | |
| 69 | L | A | 0.0000 | |
| 70 | K | A | -2.1001 | |
| 71 | P | A | -2.0684 | |
| 72 | G | A | -1.5846 | |
| 73 | C | A | -1.4400 | |
| 74 | D | A | -2.0753 | |
| 75 | Y | A | 0.0000 | |
| 76 | T | A | -0.5675 | |
| 77 | L | A | 0.0000 | |
| 78 | T | A | 0.0000 | |
| 79 | V | A | 0.0000 | |
| 80 | Y | A | -0.4206 | |
| 81 | A | A | 0.0000 | |
| 82 | V | A | 0.0000 | |
| 83 | T | A | 0.0000 | |
| 84 | W | A | 0.5087 | |
| 85 | Y | A | 0.4395 | |
| 86 | P | A | -0.3761 | |
| 87 | R | A | -1.0561 | |
| 88 | Y | A | 0.7742 | |
| 89 | G | A | 0.7196 | |
| 90 | Y | A | 1.0134 | |
| 91 | G | A | 0.0614 | |
| 92 | E | A | -1.2786 | |
| 93 | S | A | -0.9577 | |
| 94 | G | A | -0.7888 | |
| 95 | P | A | -0.6071 | |
| 96 | L | A | -0.5319 | |
| 97 | S | A | -0.7115 | |
| 98 | C | A | -0.9269 | |
| 99 | N | A | -1.7573 | |
| 100 | Y | A | -1.5278 | |
| 101 | R | A | -2.5430 | |
| 102 | T | A | 0.0000 | |
| 103 | E | A | -2.5672 | |
| 104 | L | A | -1.3304 | |
| 105 | D | A | -2.7135 | |
| 106 | K | A | -2.8126 | |
| 107 | P | A | -1.7969 | |
| 108 | S | A | -1.6405 | |
| 109 | Q | A | -1.6614 |