| Chain sequence(s) |
A: QVQLVESGGGSVQAGGSLRLSATASGGSEYSYSTFSCGWFRQAPGQEREAVAAIASMGGLTYYADSVKGRFTISRDNAKNTCTLQMNNLKPEDTAIYYVAAVRGYFMRLPSSHNFRYWGQGTQVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:04)
[INFO] Main: Simulation completed successfully. (00:01:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | A | -1.4653 | |
| 2 | V | A | -1.0056 | |
| 3 | Q | A | -1.3153 | |
| 4 | L | A | 0.0000 | |
| 5 | V | A | 0.0618 | |
| 6 | E | A | -0.6090 | |
| 7 | S | A | -0.8537 | |
| 8 | G | A | -1.3694 | |
| 9 | G | A | -1.2564 | |
| 10 | G | A | -0.9622 | |
| 11 | S | A | -0.7429 | |
| 12 | V | A | -0.8042 | |
| 13 | Q | A | -1.7664 | |
| 14 | A | A | -1.9592 | |
| 15 | G | A | -1.9159 | |
| 16 | G | A | -1.5119 | |
| 17 | S | A | -1.6540 | |
| 18 | L | A | -1.3752 | |
| 19 | R | A | -2.2328 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.7141 | |
| 22 | A | A | 0.0000 | |
| 23 | T | A | -0.6567 | |
| 24 | A | A | 0.0000 | |
| 25 | S | A | -0.9359 | |
| 26 | G | A | -1.3528 | |
| 27 | G | A | -1.4936 | |
| 28 | S | A | -1.3607 | |
| 29 | E | A | -2.0189 | |
| 30 | Y | A | -1.4941 | |
| 31 | S | A | -1.3522 | |
| 32 | Y | A | 0.0000 | |
| 33 | S | A | -0.8848 | |
| 34 | T | A | -0.6686 | |
| 35 | F | A | 0.0000 | |
| 36 | S | A | 0.0000 | |
| 37 | C | A | 0.0000 | |
| 38 | G | A | 0.0000 | |
| 39 | W | A | 0.0000 | |
| 40 | F | A | 0.0000 | |
| 41 | R | A | -1.3512 | |
| 42 | Q | A | -1.9669 | |
| 43 | A | A | -1.8004 | |
| 44 | P | A | -1.2604 | |
| 45 | G | A | -1.7287 | |
| 46 | Q | A | -2.8549 | |
| 47 | E | A | -3.3670 | |
| 48 | R | A | -2.8339 | |
| 49 | E | A | -1.9166 | |
| 50 | A | A | -0.6020 | |
| 51 | V | A | 0.0000 | |
| 52 | A | A | 0.0000 | |
| 53 | A | A | 0.0000 | |
| 54 | I | A | 0.0000 | |
| 55 | A | A | 0.0000 | |
| 56 | S | A | 0.0000 | |
| 57 | M | A | 0.8622 | |
| 58 | G | A | -0.0550 | |
| 59 | G | A | 0.1782 | |
| 60 | L | A | 1.0788 | |
| 61 | T | A | 0.3205 | |
| 62 | Y | A | 0.3697 | |
| 63 | Y | A | -0.5969 | |
| 64 | A | A | 0.0000 | |
| 65 | D | A | -2.4018 | |
| 66 | S | A | -1.7752 | |
| 67 | V | A | 0.0000 | |
| 68 | K | A | -2.5669 | |
| 69 | G | A | -1.9628 | |
| 70 | R | A | -1.9311 | |
| 71 | F | A | 0.0000 | |
| 72 | T | A | -0.8923 | |
| 73 | I | A | 0.0000 | |
| 74 | S | A | -0.5914 | |
| 75 | R | A | -1.0454 | |
| 76 | D | A | -1.7302 | |
| 77 | N | A | -1.8259 | |
| 78 | A | A | -1.4969 | |
| 79 | K | A | -2.2676 | |
| 80 | N | A | -1.6239 | |
| 81 | T | A | -1.1278 | |
| 82 | C | A | 0.0000 | |
| 83 | T | A | -0.7865 | |
| 84 | L | A | 0.0000 | |
| 85 | Q | A | -1.3286 | |
| 86 | M | A | 0.0000 | |
| 87 | N | A | -2.3686 | |
| 88 | N | A | -2.5419 | |
| 89 | L | A | 0.0000 | |
| 90 | K | A | -2.7215 | |
| 91 | P | A | -1.9107 | |
| 92 | E | A | -2.3257 | |
| 93 | D | A | 0.0000 | |
| 94 | T | A | -1.1636 | |
| 95 | A | A | 0.0000 | |
| 96 | I | A | -0.6239 | |
| 97 | Y | A | 0.0000 | |
| 98 | Y | A | 0.0000 | |
| 99 | V | A | 0.0000 | |
| 100 | A | A | 0.0000 | |
| 101 | A | A | 0.0000 | |
| 102 | V | A | 0.0000 | |
| 103 | R | A | -1.7613 | |
| 104 | G | A | 0.1318 | |
| 105 | Y | A | 1.8074 | |
| 106 | F | A | 2.0397 | |
| 107 | M | A | 1.0749 | |
| 108 | R | A | -0.3749 | |
| 109 | L | A | 0.9389 | |
| 110 | P | A | 0.0000 | |
| 111 | S | A | -0.6010 | |
| 112 | S | A | -1.1306 | |
| 113 | H | A | -1.5897 | |
| 114 | N | A | -1.3483 | |
| 115 | F | A | 0.0000 | |
| 116 | R | A | -2.1716 | |
| 117 | Y | A | -0.8227 | |
| 118 | W | A | -0.2871 | |
| 119 | G | A | -0.4636 | |
| 120 | Q | A | -1.1527 | |
| 121 | G | A | -0.8345 | |
| 122 | T | A | 0.0000 | |
| 123 | Q | A | -1.3692 | |
| 124 | V | A | 0.0000 | |
| 125 | T | A | -0.9980 | |
| 126 | V | A | 0.0000 | |
| 127 | S | A | -1.2347 | |
| 128 | S | A | -0.8979 |