Project name: query_structure

Status: done

Started: 2026-03-17 00:54:37
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Chain sequence(s) A: QVQLVESGGGSVQAGGSLRLSATASGGSEYSYSTFSCGWFRQAPGQEREAVAAIASMGGLTYYADSVKGRFTISRDNAKNTCTLQMNNLKPEDTAIYYVAAVRGYFMRLPSSHNFRYWGQGTQVTVSS
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:04)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:05)
Show buried residues

Minimal score value
-3.367
Maximal score value
2.0397
Average score
-0.8066
Total score value
-103.2498

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q A -1.4653
2 V A -1.0056
3 Q A -1.3153
4 L A 0.0000
5 V A 0.0618
6 E A -0.6090
7 S A -0.8537
8 G A -1.3694
9 G A -1.2564
10 G A -0.9622
11 S A -0.7429
12 V A -0.8042
13 Q A -1.7664
14 A A -1.9592
15 G A -1.9159
16 G A -1.5119
17 S A -1.6540
18 L A -1.3752
19 R A -2.2328
20 L A 0.0000
21 S A -0.7141
22 A A 0.0000
23 T A -0.6567
24 A A 0.0000
25 S A -0.9359
26 G A -1.3528
27 G A -1.4936
28 S A -1.3607
29 E A -2.0189
30 Y A -1.4941
31 S A -1.3522
32 Y A 0.0000
33 S A -0.8848
34 T A -0.6686
35 F A 0.0000
36 S A 0.0000
37 C A 0.0000
38 G A 0.0000
39 W A 0.0000
40 F A 0.0000
41 R A -1.3512
42 Q A -1.9669
43 A A -1.8004
44 P A -1.2604
45 G A -1.7287
46 Q A -2.8549
47 E A -3.3670
48 R A -2.8339
49 E A -1.9166
50 A A -0.6020
51 V A 0.0000
52 A A 0.0000
53 A A 0.0000
54 I A 0.0000
55 A A 0.0000
56 S A 0.0000
57 M A 0.8622
58 G A -0.0550
59 G A 0.1782
60 L A 1.0788
61 T A 0.3205
62 Y A 0.3697
63 Y A -0.5969
64 A A 0.0000
65 D A -2.4018
66 S A -1.7752
67 V A 0.0000
68 K A -2.5669
69 G A -1.9628
70 R A -1.9311
71 F A 0.0000
72 T A -0.8923
73 I A 0.0000
74 S A -0.5914
75 R A -1.0454
76 D A -1.7302
77 N A -1.8259
78 A A -1.4969
79 K A -2.2676
80 N A -1.6239
81 T A -1.1278
82 C A 0.0000
83 T A -0.7865
84 L A 0.0000
85 Q A -1.3286
86 M A 0.0000
87 N A -2.3686
88 N A -2.5419
89 L A 0.0000
90 K A -2.7215
91 P A -1.9107
92 E A -2.3257
93 D A 0.0000
94 T A -1.1636
95 A A 0.0000
96 I A -0.6239
97 Y A 0.0000
98 Y A 0.0000
99 V A 0.0000
100 A A 0.0000
101 A A 0.0000
102 V A 0.0000
103 R A -1.7613
104 G A 0.1318
105 Y A 1.8074
106 F A 2.0397
107 M A 1.0749
108 R A -0.3749
109 L A 0.9389
110 P A 0.0000
111 S A -0.6010
112 S A -1.1306
113 H A -1.5897
114 N A -1.3483
115 F A 0.0000
116 R A -2.1716
117 Y A -0.8227
118 W A -0.2871
119 G A -0.4636
120 Q A -1.1527
121 G A -0.8345
122 T A 0.0000
123 Q A -1.3692
124 V A 0.0000
125 T A -0.9980
126 V A 0.0000
127 S A -1.2347
128 S A -0.8979
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Laboratory of Theory of Biopolymers 2018