| Chain sequence(s) |
B: SSFSDFRFIAELQAKAEKASPEEAEKIKAEMAAYFAEK
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:57)
[INFO] Main: Simulation completed successfully. (00:00:57)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | B | 0.3980 | |
| 2 | S | B | 0.6233 | |
| 3 | F | B | 2.0171 | |
| 4 | S | B | 0.8945 | |
| 5 | D | B | 0.0000 | |
| 6 | F | B | 1.6745 | |
| 7 | R | B | -0.5685 | |
| 8 | F | B | 0.2611 | |
| 9 | I | B | -0.1828 | |
| 10 | A | B | -0.9909 | |
| 11 | E | B | -2.3407 | |
| 12 | L | B | 0.0000 | |
| 13 | Q | B | -2.6473 | |
| 14 | A | B | -2.4117 | |
| 15 | K | B | -3.3124 | |
| 16 | A | B | -3.8754 | |
| 17 | E | B | -3.5434 | |
| 18 | K | B | -3.2421 | |
| 19 | A | B | -2.9770 | |
| 20 | S | B | -2.4101 | |
| 21 | P | B | -2.6839 | |
| 22 | E | B | -3.7586 | |
| 23 | E | B | -4.1646 | |
| 24 | A | B | -4.3025 | |
| 25 | E | B | -4.5446 | |
| 26 | K | B | -4.4974 | |
| 27 | I | B | 0.0000 | |
| 28 | K | B | -3.9197 | |
| 29 | A | B | -2.5621 | |
| 30 | E | B | -2.5761 | |
| 31 | M | B | -1.2699 | |
| 32 | A | B | -0.6272 | |
| 33 | A | B | -0.8065 | |
| 34 | Y | B | -0.3702 | |
| 35 | F | B | 0.6768 | |
| 36 | A | B | -0.5354 | |
| 37 | E | B | -1.9332 | |
| 38 | K | B | -1.9396 |