Project name: ae35f962f08644e

Status: done

Started: 2026-06-11 05:13:12
Settings
Chain sequence(s) H: QIQLVQSGPELKKPGETVKISCKASGYTFTTYGMSWVKQAPGKGLKWMGWIYTYSGVPTYADDLEGRFAFSLETSASTAYLQINNLKNEDTATYFCARVRDGYYRYAMDYWGQGTSVTVSS
L: DIHMTQSPSSLSASLGGKVTITCKASQDINRYIAWYQHKPGKGPRLLIHFTSTLQSGIPSRFSGSGSGRDYSFSISNLEPEDIATYYCLQYDDLRTFGGGTKLEIK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:40)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:41)
Show buried residues

Minimal score value
-4.0953
Maximal score value
2.029
Average score
-0.6892
Total score value
-156.4478

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q H -1.4094
2 I H -0.7695
3 Q H -0.8854
4 L H 0.0000
5 V H 0.4694
6 Q H 0.0000
7 S H -0.5526
8 G H -0.7665
9 P H -0.4978
11 E H -0.2792
12 L H 0.5592
13 K H -1.1993
14 K H -2.6186
15 P H -2.7990
16 G H -2.5542
17 E H -2.3448
18 T H -1.8572
19 V H 0.0000
20 K H -1.2999
21 I H 0.0000
22 S H -0.3336
23 C H 0.0000
24 K H -0.4957
25 A H 0.0000
26 S H -0.6619
27 G H -0.9424
28 Y H -0.3361
29 T H -0.0715
30 F H 0.0000
35 T H 0.5780
36 T H 0.0119
37 Y H -0.1461
38 G H 0.0000
39 M H 0.0000
40 S H 0.0000
41 W H 0.0000
42 V H 0.0000
43 K H -0.8726
44 Q H -1.1539
45 A H -1.4273
46 P H -1.3069
47 G H -1.4570
48 K H -2.3452
49 G H -1.5421
50 L H 0.0000
51 K H -1.5698
52 W H 0.0000
53 M H 0.0000
54 G H 0.0000
55 W H 0.7013
56 I H 0.0000
57 Y H 1.4880
58 T H 0.0000
59 Y H 1.6499
62 S H 1.0965
63 G H 1.1253
64 V H 2.0290
65 P H 1.0179
66 T H 0.6140
67 Y H -0.3044
68 A H 0.0000
69 D H -3.1342
70 D H -3.2538
71 L H 0.0000
72 E H -2.9098
74 G H -1.8203
75 R H -1.4863
76 F H 0.0000
77 A H -0.2994
78 F H 0.0000
79 S H 0.1776
80 L H 0.2206
81 E H -0.5642
82 T H -0.2668
83 S H -0.3609
84 A H -0.4104
85 S H -0.5042
86 T H 0.0000
87 A H 0.0000
88 Y H -0.2317
89 L H 0.0000
90 Q H -0.8331
91 I H 0.0000
92 N H -1.6993
93 N H -2.4568
94 L H 0.0000
95 K H -3.1222
96 N H -3.0141
97 E H -2.7968
98 D H 0.0000
99 T H -1.2067
100 A H 0.0000
101 T H -0.5211
102 Y H 0.0000
103 F H 0.0000
104 C H 0.0000
105 A H 0.0000
106 R H 0.0000
107 V H 0.0000
108 R H -1.0717
109 D H -1.6857
110 G H -0.5571
111 Y H 0.8027
112A Y H 0.5900
112 R H -0.1679
113 Y H -0.0955
114 A H 0.0000
115 M H 0.0000
116 D H 0.0000
117 Y H 0.0268
118 W H 0.0000
119 G H 0.0000
120 Q H -1.5195
121 G H -0.9883
122 T H 0.0000
123 S H -0.4602
124 V H 0.0000
125 T H -0.6229
126 V H 0.0000
127 S H -1.1458
128 S H -1.0078
1 D L -2.8394
2 I L 0.0000
3 H L -1.7974
4 M L 0.0000
5 T L -1.0083
6 Q L -0.7006
7 S L -0.4748
8 P L -0.5737
9 S L -0.8725
10 S L -1.1757
11 L L -0.7248
12 S L -0.9894
13 A L -0.9909
14 S L -1.2192
15 L L -0.4011
16 G L -1.2671
17 G L -1.5937
18 K L -2.2044
19 V L 0.0000
20 T L -0.4289
21 I L 0.0000
22 T L -0.7273
23 C L 0.0000
24 K L -2.6144
25 A L 0.0000
26 S L -2.2142
27 Q L -3.0790
28 D L -3.5232
29 I L 0.0000
36 N L -2.5451
37 R L -2.4018
38 Y L -1.1130
39 I L 0.0000
40 A L 0.0000
41 W L 0.0000
42 Y L 0.0000
43 Q L 0.0000
44 H L -1.0589
45 K L -1.4616
46 P L -1.0467
47 G L -1.7246
48 K L -2.6017
49 G L -1.7021
50 P L 0.0000
51 R L -1.0515
52 L L 0.0000
53 L L 0.0000
54 I L 0.0000
55 H L 0.0000
56 F L -0.1122
57 T L 0.0000
65 S L -0.2302
66 T L 0.1283
67 L L 0.2562
68 Q L -0.2038
69 S L -0.3323
70 G L -0.4736
71 I L -0.2411
72 P L -0.2919
74 S L -0.5035
75 R L -1.0997
76 F L 0.0000
77 S L -0.3185
78 G L -0.2054
79 S L -0.7556
80 G L -1.6441
83 S L -2.1820
84 G L -2.9553
85 R L -4.0953
86 D L -3.5380
87 Y L 0.0000
88 S L -0.7367
89 F L 0.0000
90 S L -0.6942
91 I L 0.0000
92 S L -1.7670
93 N L -2.1747
94 L L 0.0000
95 E L -1.5194
96 P L -1.2571
97 E L -1.7697
98 D L 0.0000
99 I L -0.1601
100 A L 0.0000
101 T L -0.9411
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 L L 0.0000
106 Q L 0.0000
107 Y L 0.0000
108 D L -1.8890
114 D L -2.3118
115 L L -1.2048
116 R L -0.9204
117 T L -1.0568
118 F L -0.3885
119 G L 0.0000
120 G L -0.9715
121 G L -1.0493
122 T L 0.0000
123 K L -2.0481
124 L L 0.0000
125 E L -2.0219
126 I L -1.0512
127 K L -1.7332
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Laboratory of Theory of Biopolymers 2018