| Chain sequence(s) |
A: MGSSHHHHHHSSGENLYFQGMGSKPYTMVEVMNADGTVEEVDLGDLLAEALDRQLKEQPELEPGEVYKEVREDLEKTLLAEVMRHTGGNQTRAALMMGINRGTLRKKLKKYGMN
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 5 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:01)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.9656 | |
| 2 | G | A | -0.3029 | |
| 3 | S | A | -0.3250 | |
| 4 | S | A | -0.4171 | |
| 5 | H | A | -1.1965 | |
| 6 | H | A | -1.3255 | |
| 7 | H | A | -1.3329 | |
| 8 | H | A | -1.3397 | |
| 9 | H | A | -1.3399 | |
| 10 | H | A | -1.2059 | |
| 11 | S | A | -0.4282 | |
| 12 | S | A | -0.3403 | |
| 13 | G | A | -0.8258 | |
| 14 | E | A | -1.9480 | |
| 15 | N | A | -1.3239 | |
| 16 | L | A | 1.3636 | |
| 17 | Y | A | 1.9688 | |
| 18 | F | A | 1.9612 | |
| 19 | Q | A | -0.9291 | |
| 20 | G | A | -0.4880 | |
| 21 | M | A | 0.8811 | |
| 22 | G | A | -0.3110 | |
| 23 | S | A | -0.6089 | |
| 24 | K | A | -1.7836 | |
| 25 | P | A | -0.3079 | |
| 26 | Y | A | 1.2546 | |
| 27 | T | A | 0.3083 | |
| 28 | M | A | 0.6640 | |
| 29 | V | A | 0.1903 | |
| 30 | E | A | -1.8745 | |
| 31 | V | A | 0.3261 | |
| 32 | M | A | 1.3035 | |
| 33 | N | A | -0.2188 | |
| 34 | A | A | -0.3391 | |
| 35 | D | A | -1.8634 | |
| 36 | G | A | -0.8011 | |
| 37 | T | A | 0.1746 | |
| 38 | V | A | 1.6960 | |
| 39 | E | A | -1.1241 | |
| 40 | E | A | -2.1976 | |
| 41 | V | A | -0.1114 | |
| 42 | D | A | 0.0388 | |
| 43 | L | A | 0.3935 | |
| 44 | G | A | -0.4455 | |
| 45 | D | A | -1.7309 | |
| 46 | L | A | 0.2637 | |
| 47 | L | A | 0.5834 | |
| 48 | A | A | -0.1849 | |
| 49 | E | A | -1.8053 | |
| 50 | A | A | -0.2482 | |
| 51 | L | A | 0.1187 | |
| 52 | D | A | -1.4272 | |
| 53 | R | A | -2.1515 | |
| 54 | Q | A | -0.6137 | |
| 55 | L | A | 0.6641 | |
| 56 | K | A | -1.8426 | |
| 57 | E | A | -2.3169 | |
| 58 | Q | A | -1.3472 | |
| 59 | P | A | -0.7647 | |
| 60 | E | A | -1.8138 | |
| 61 | L | A | -0.4082 | |
| 62 | E | A | -1.8121 | |
| 63 | P | A | -0.6744 | |
| 64 | G | A | -0.7108 | |
| 65 | E | A | -1.0973 | |
| 66 | V | A | 0.3710 | |
| 67 | Y | A | 1.0631 | |
| 68 | K | A | -1.6701 | |
| 69 | E | A | -1.3928 | |
| 70 | V | A | -0.0791 | |
| 71 | R | A | -1.2520 | |
| 72 | E | A | -0.8948 | |
| 73 | D | A | -1.6525 | |
| 74 | L | A | 0.6720 | |
| 75 | E | A | -0.1946 | |
| 76 | K | A | -0.7574 | |
| 77 | T | A | -0.0097 | |
| 78 | L | A | 0.9962 | |
| 79 | L | A | 0.0000 | |
| 80 | A | A | -0.1949 | |
| 81 | E | A | -1.2194 | |
| 82 | V | A | 0.0000 | |
| 83 | M | A | -0.2413 | |
| 84 | R | A | -2.0067 | |
| 85 | H | A | -1.3372 | |
| 86 | T | A | 0.0000 | |
| 87 | G | A | -0.5380 | |
| 88 | G | A | -0.5994 | |
| 89 | N | A | -0.8950 | |
| 90 | Q | A | -0.4403 | |
| 91 | T | A | -0.4565 | |
| 92 | R | A | -1.8569 | |
| 93 | A | A | 0.0000 | |
| 94 | A | A | 0.0000 | |
| 95 | L | A | 1.7296 | |
| 96 | M | A | 1.3029 | |
| 97 | M | A | 0.3070 | |
| 98 | G | A | -0.3255 | |
| 99 | I | A | 0.2533 | |
| 100 | N | A | -1.5119 | |
| 101 | R | A | -2.1114 | |
| 102 | G | A | -0.5123 | |
| 103 | T | A | -0.0634 | |
| 104 | L | A | 0.0000 | |
| 105 | R | A | -2.1583 | |
| 106 | K | A | -2.1188 | |
| 107 | K | A | -0.9157 | |
| 108 | L | A | 0.0000 | |
| 109 | K | A | -2.0698 | |
| 110 | K | A | -2.0407 | |
| 111 | Y | A | -0.2639 | |
| 112 | G | A | -0.5424 | |
| 113 | M | A | 0.0737 | |
| 114 | N | A | -1.2060 |