Project name: ae50ef52086931f

Status: done

Started: 2026-03-03 01:16:34
Settings
Chain sequence(s) H: EVQLQQSGPELVQPGASMKISCKASGYSFTDYTMNWVKQSHGKNLEWIGLINPYNGGSRYNQKFMAKATLTVDKSSNTAYMELLSVTSEDSAVYYCARDAGYFGSGFYFDYWGQGTTLTVSS
L: DIVMTQSHKFMSTSVGDRVSITCKASQDVSTAVAWYQQKPGQSPKLLIYSASYRSTGVPDRFTGSGSGTDFTFTISSVQAEDLAVYYCQQHYSTPTFGAGTKLELK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:37)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:39)
Show buried residues

Minimal score value
-2.6928
Maximal score value
2.3313
Average score
-0.5049
Total score value
-115.1244

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E H -2.0872
2 V H -1.3446
3 Q H -2.1542
4 L H 0.0000
5 Q H -2.2431
6 Q H 0.0000
7 S H -1.1347
8 G H -0.9117
9 P H -0.4566
11 E H -0.2805
12 L H 0.8892
13 V H -0.0338
14 Q H -1.1863
15 P H -1.1677
16 G H -0.9140
17 A H -0.6113
18 S H -0.6213
19 M H 0.0000
20 K H -1.2981
21 I H 0.0000
22 S H -0.7599
23 C H 0.0000
24 K H -1.9503
25 A H 0.0000
26 S H -1.5777
27 G H -1.2887
28 Y H -0.8613
29 S H -0.7425
30 F H 0.0000
35 T H -0.9635
36 D H -1.2218
37 Y H -0.0375
38 T H -0.0422
39 M H 0.0000
40 N H 0.0000
41 W H 0.0000
42 V H 0.0000
43 K H 0.0000
44 Q H -1.1466
45 S H -1.7415
46 H H -2.0239
47 G H -1.8936
48 K H -2.6928
49 N H -1.9665
50 L H 0.0000
51 E H -1.1652
52 W H 0.0000
53 I H 0.0000
54 G H 0.0000
55 L H 0.0000
56 I H 0.0000
57 N H -0.8424
58 P H 0.0000
59 Y H -0.0370
62 N H -0.9577
63 G H -0.8843
64 G H -1.2362
65 S H -1.3911
66 R H -1.9546
67 Y H -1.1074
68 N H -1.5812
69 Q H -2.1188
70 K H -2.0777
71 F H 0.0000
72 M H -0.0962
74 A H 0.0644
75 K H -0.2132
76 A H 0.0000
77 T H -0.2076
78 L H 0.0000
79 T H -0.1893
80 V H -0.3393
81 D H -1.2825
82 K H -1.5680
83 S H -1.1467
84 S H -1.1465
85 N H -1.5651
86 T H 0.0000
87 A H 0.0000
88 Y H -0.2585
89 M H 0.0000
90 E H -0.7381
91 L H 0.0000
92 L H 0.0112
93 S H -0.3892
94 V H 0.0000
95 T H -1.1013
96 S H -1.4062
97 E H -2.0725
98 D H 0.0000
99 S H -0.7622
100 A H 0.0000
101 V H -0.1509
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 A H 0.0000
106 R H 0.0000
107 D H 0.0000
108 A H 0.6795
109 G H 1.1145
110 Y H 1.9090
111 F H 2.3313
111A G H 0.5951
112A S H 0.7258
112 G H 0.9332
113 F H 1.1900
114 Y H 0.6139
115 F H 0.0000
116 D H -0.0312
117 Y H -0.0718
118 W H -0.4127
119 G H 0.0000
120 Q H -1.7595
121 G H -0.9826
122 T H 0.0000
123 T H -0.2854
124 L H 0.0000
125 T H -0.1225
126 V H 0.0000
127 S H -0.4561
128 S H -0.6194
1 D L -1.5467
2 I L -0.2251
3 V L 0.9794
4 M L 0.0000
5 T L -0.4469
6 Q L 0.0000
7 S L -0.9289
8 H L -1.1698
9 K L -0.9987
10 F L 0.4350
11 M L -0.1521
12 S L -0.4155
13 T L 0.0000
14 S L -0.2438
15 V L 0.7235
16 G L -0.4744
17 D L -1.2263
18 R L -2.0622
19 V L 0.0000
20 S L -0.6031
21 I L 0.0000
22 T L -0.9081
23 C L 0.0000
24 K L -1.8901
25 A L 0.0000
26 S L -1.1290
27 Q L -2.2128
28 D L -2.6553
29 V L 0.0000
36 S L -0.9161
37 T L -0.4773
38 A L 0.1987
39 V L 0.0000
40 A L 0.0000
41 W L 0.0000
42 Y L 0.0000
43 Q L 0.0000
44 Q L -0.9872
45 K L -1.4167
46 P L -0.9830
47 G L -1.4215
48 Q L -2.0359
49 S L -1.2786
50 P L 0.0000
51 K L -1.0400
52 L L 0.0000
53 L L 0.0000
54 I L 0.0000
55 Y L 0.4988
56 S L 0.3324
57 A L 0.0000
65 S L 0.1345
66 Y L 0.7995
67 R L -0.6973
68 S L -0.4143
69 T L -0.4003
70 G L -0.8094
71 V L -0.9314
72 P L -1.2744
74 D L -2.1672
75 R L -1.4729
76 F L 0.0000
77 T L -0.5542
78 G L 0.0000
79 S L -0.4767
80 G L -1.0707
83 S L -1.3039
84 G L -1.8179
85 T L -2.2686
86 D L -2.5899
87 F L 0.0000
88 T L -0.7338
89 F L 0.0000
90 T L -0.5648
91 I L 0.0000
92 S L -1.4992
93 S L -1.2079
94 V L 0.0000
95 Q L -0.6278
96 A L -0.5330
97 E L -1.6258
98 D L 0.0000
99 L L -0.4757
100 A L 0.0000
101 V L -0.3150
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 Q L 0.0000
106 Q L 0.0000
107 H L 0.0000
108 Y L 0.9815
114 S L 0.3702
115 T L -0.3260
116 P L 0.0000
117 T L 0.0373
118 F L 0.0000
119 G L 0.0000
120 A L -0.8833
121 G L 0.0000
122 T L 0.0000
123 K L -0.9039
124 L L 0.0000
125 E L -0.6935
126 L L 0.0885
127 K L -1.1934
Download PDB file
View in 3Dmol
Play the video

Laboratory of Theory of Biopolymers 2018