| Chain sequence(s) |
H: EVQLQQSGPELVQPGASMKISCKASGYSFTDYTMNWVKQSHGKNLEWIGLINPYNGGSRYNQKFMAKATLTVDKSSNTAYMELLSVTSEDSAVYYCARDAGYFGSGFYFDYWGQGTTLTVSS
L: DIVMTQSHKFMSTSVGDRVSITCKASQDVSTAVAWYQQKPGQSPKLLIYSASYRSTGVPDRFTGSGSGTDFTFTISSVQAEDLAVYYCQQHYSTPTFGAGTKLELK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:37)
[INFO] Main: Simulation completed successfully. (00:02:39)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -2.0872 | |
| 2 | V | H | -1.3446 | |
| 3 | Q | H | -2.1542 | |
| 4 | L | H | 0.0000 | |
| 5 | Q | H | -2.2431 | |
| 6 | Q | H | 0.0000 | |
| 7 | S | H | -1.1347 | |
| 8 | G | H | -0.9117 | |
| 9 | P | H | -0.4566 | |
| 11 | E | H | -0.2805 | |
| 12 | L | H | 0.8892 | |
| 13 | V | H | -0.0338 | |
| 14 | Q | H | -1.1863 | |
| 15 | P | H | -1.1677 | |
| 16 | G | H | -0.9140 | |
| 17 | A | H | -0.6113 | |
| 18 | S | H | -0.6213 | |
| 19 | M | H | 0.0000 | |
| 20 | K | H | -1.2981 | |
| 21 | I | H | 0.0000 | |
| 22 | S | H | -0.7599 | |
| 23 | C | H | 0.0000 | |
| 24 | K | H | -1.9503 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -1.5777 | |
| 27 | G | H | -1.2887 | |
| 28 | Y | H | -0.8613 | |
| 29 | S | H | -0.7425 | |
| 30 | F | H | 0.0000 | |
| 35 | T | H | -0.9635 | |
| 36 | D | H | -1.2218 | |
| 37 | Y | H | -0.0375 | |
| 38 | T | H | -0.0422 | |
| 39 | M | H | 0.0000 | |
| 40 | N | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | K | H | 0.0000 | |
| 44 | Q | H | -1.1466 | |
| 45 | S | H | -1.7415 | |
| 46 | H | H | -2.0239 | |
| 47 | G | H | -1.8936 | |
| 48 | K | H | -2.6928 | |
| 49 | N | H | -1.9665 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -1.1652 | |
| 52 | W | H | 0.0000 | |
| 53 | I | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | L | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | N | H | -0.8424 | |
| 58 | P | H | 0.0000 | |
| 59 | Y | H | -0.0370 | |
| 62 | N | H | -0.9577 | |
| 63 | G | H | -0.8843 | |
| 64 | G | H | -1.2362 | |
| 65 | S | H | -1.3911 | |
| 66 | R | H | -1.9546 | |
| 67 | Y | H | -1.1074 | |
| 68 | N | H | -1.5812 | |
| 69 | Q | H | -2.1188 | |
| 70 | K | H | -2.0777 | |
| 71 | F | H | 0.0000 | |
| 72 | M | H | -0.0962 | |
| 74 | A | H | 0.0644 | |
| 75 | K | H | -0.2132 | |
| 76 | A | H | 0.0000 | |
| 77 | T | H | -0.2076 | |
| 78 | L | H | 0.0000 | |
| 79 | T | H | -0.1893 | |
| 80 | V | H | -0.3393 | |
| 81 | D | H | -1.2825 | |
| 82 | K | H | -1.5680 | |
| 83 | S | H | -1.1467 | |
| 84 | S | H | -1.1465 | |
| 85 | N | H | -1.5651 | |
| 86 | T | H | 0.0000 | |
| 87 | A | H | 0.0000 | |
| 88 | Y | H | -0.2585 | |
| 89 | M | H | 0.0000 | |
| 90 | E | H | -0.7381 | |
| 91 | L | H | 0.0000 | |
| 92 | L | H | 0.0112 | |
| 93 | S | H | -0.3892 | |
| 94 | V | H | 0.0000 | |
| 95 | T | H | -1.1013 | |
| 96 | S | H | -1.4062 | |
| 97 | E | H | -2.0725 | |
| 98 | D | H | 0.0000 | |
| 99 | S | H | -0.7622 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | -0.1509 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | R | H | 0.0000 | |
| 107 | D | H | 0.0000 | |
| 108 | A | H | 0.6795 | |
| 109 | G | H | 1.1145 | |
| 110 | Y | H | 1.9090 | |
| 111 | F | H | 2.3313 | |
| 111A | G | H | 0.5951 | |
| 112A | S | H | 0.7258 | |
| 112 | G | H | 0.9332 | |
| 113 | F | H | 1.1900 | |
| 114 | Y | H | 0.6139 | |
| 115 | F | H | 0.0000 | |
| 116 | D | H | -0.0312 | |
| 117 | Y | H | -0.0718 | |
| 118 | W | H | -0.4127 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.7595 | |
| 121 | G | H | -0.9826 | |
| 122 | T | H | 0.0000 | |
| 123 | T | H | -0.2854 | |
| 124 | L | H | 0.0000 | |
| 125 | T | H | -0.1225 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.4561 | |
| 128 | S | H | -0.6194 | |
| 1 | D | L | -1.5467 | |
| 2 | I | L | -0.2251 | |
| 3 | V | L | 0.9794 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -0.4469 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -0.9289 | |
| 8 | H | L | -1.1698 | |
| 9 | K | L | -0.9987 | |
| 10 | F | L | 0.4350 | |
| 11 | M | L | -0.1521 | |
| 12 | S | L | -0.4155 | |
| 13 | T | L | 0.0000 | |
| 14 | S | L | -0.2438 | |
| 15 | V | L | 0.7235 | |
| 16 | G | L | -0.4744 | |
| 17 | D | L | -1.2263 | |
| 18 | R | L | -2.0622 | |
| 19 | V | L | 0.0000 | |
| 20 | S | L | -0.6031 | |
| 21 | I | L | 0.0000 | |
| 22 | T | L | -0.9081 | |
| 23 | C | L | 0.0000 | |
| 24 | K | L | -1.8901 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -1.1290 | |
| 27 | Q | L | -2.2128 | |
| 28 | D | L | -2.6553 | |
| 29 | V | L | 0.0000 | |
| 36 | S | L | -0.9161 | |
| 37 | T | L | -0.4773 | |
| 38 | A | L | 0.1987 | |
| 39 | V | L | 0.0000 | |
| 40 | A | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | -0.9872 | |
| 45 | K | L | -1.4167 | |
| 46 | P | L | -0.9830 | |
| 47 | G | L | -1.4215 | |
| 48 | Q | L | -2.0359 | |
| 49 | S | L | -1.2786 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -1.0400 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | 0.4988 | |
| 56 | S | L | 0.3324 | |
| 57 | A | L | 0.0000 | |
| 65 | S | L | 0.1345 | |
| 66 | Y | L | 0.7995 | |
| 67 | R | L | -0.6973 | |
| 68 | S | L | -0.4143 | |
| 69 | T | L | -0.4003 | |
| 70 | G | L | -0.8094 | |
| 71 | V | L | -0.9314 | |
| 72 | P | L | -1.2744 | |
| 74 | D | L | -2.1672 | |
| 75 | R | L | -1.4729 | |
| 76 | F | L | 0.0000 | |
| 77 | T | L | -0.5542 | |
| 78 | G | L | 0.0000 | |
| 79 | S | L | -0.4767 | |
| 80 | G | L | -1.0707 | |
| 83 | S | L | -1.3039 | |
| 84 | G | L | -1.8179 | |
| 85 | T | L | -2.2686 | |
| 86 | D | L | -2.5899 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.7338 | |
| 89 | F | L | 0.0000 | |
| 90 | T | L | -0.5648 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.4992 | |
| 93 | S | L | -1.2079 | |
| 94 | V | L | 0.0000 | |
| 95 | Q | L | -0.6278 | |
| 96 | A | L | -0.5330 | |
| 97 | E | L | -1.6258 | |
| 98 | D | L | 0.0000 | |
| 99 | L | L | -0.4757 | |
| 100 | A | L | 0.0000 | |
| 101 | V | L | -0.3150 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | H | L | 0.0000 | |
| 108 | Y | L | 0.9815 | |
| 114 | S | L | 0.3702 | |
| 115 | T | L | -0.3260 | |
| 116 | P | L | 0.0000 | |
| 117 | T | L | 0.0373 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | A | L | -0.8833 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -0.9039 | |
| 124 | L | L | 0.0000 | |
| 125 | E | L | -0.6935 | |
| 126 | L | L | 0.0885 | |
| 127 | K | L | -1.1934 |