| Chain sequence(s) |
B: SMEEARALFEEAKALARELRAESRAAVAAGDYAAAARVALRVLEAAGEVVEALGDNEEARELLERARAAAEEAAATGDRAALLEATRLIGELARAIKEAVGSGC
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:44)
[INFO] Main: Simulation completed successfully. (00:03:44)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | B | -1.3941 | |
| 2 | M | B | -1.4896 | |
| 3 | E | B | -2.8646 | |
| 4 | E | B | -2.9750 | |
| 5 | A | B | 0.0000 | |
| 6 | R | B | -2.7174 | |
| 7 | A | B | -2.2359 | |
| 8 | L | B | -2.3435 | |
| 9 | F | B | -2.6502 | |
| 10 | E | B | -3.0486 | |
| 11 | E | B | -3.1295 | |
| 12 | A | B | 0.0000 | |
| 13 | K | B | -2.8755 | |
| 14 | A | B | -2.7570 | |
| 15 | L | B | -2.4855 | |
| 16 | A | B | -3.0012 | |
| 17 | R | B | -3.8918 | |
| 18 | E | B | -3.5595 | |
| 19 | L | B | -3.2715 | |
| 20 | R | B | -3.9649 | |
| 21 | A | B | -2.8196 | |
| 22 | E | B | -3.1128 | |
| 23 | S | B | -2.6515 | |
| 24 | R | B | -2.4063 | |
| 25 | A | B | -1.4215 | |
| 26 | A | B | -0.9774 | |
| 27 | V | B | 0.2321 | |
| 28 | A | B | -0.0519 | |
| 29 | A | B | -0.0794 | |
| 30 | G | B | -0.6276 | |
| 31 | D | B | -1.1759 | |
| 32 | Y | B | -0.6709 | |
| 33 | A | B | -1.4499 | |
| 34 | A | B | -0.8136 | |
| 35 | A | B | 0.0000 | |
| 36 | A | B | 0.0000 | |
| 37 | R | B | -2.2945 | |
| 38 | V | B | -1.8499 | |
| 39 | A | B | -1.5889 | |
| 40 | L | B | -2.1205 | |
| 41 | R | B | -2.5920 | |
| 42 | V | B | -1.6373 | |
| 43 | L | B | 0.0000 | |
| 44 | E | B | -2.8172 | |
| 45 | A | B | -2.1589 | |
| 46 | A | B | 0.0000 | |
| 47 | G | B | -2.5955 | |
| 48 | E | B | -2.9682 | |
| 49 | V | B | 0.0000 | |
| 50 | V | B | 0.0000 | |
| 51 | E | B | -2.9272 | |
| 52 | A | B | -2.2887 | |
| 53 | L | B | -2.1070 | |
| 54 | G | B | -1.9631 | |
| 55 | D | B | -3.1544 | |
| 56 | N | B | -3.3455 | |
| 57 | E | B | -4.1417 | |
| 58 | E | B | -3.9315 | |
| 59 | A | B | 0.0000 | |
| 60 | R | B | -4.2806 | |
| 61 | E | B | -4.4480 | |
| 62 | L | B | -3.1191 | |
| 63 | L | B | -3.0642 | |
| 64 | E | B | -3.7037 | |
| 65 | R | B | -3.6899 | |
| 66 | A | B | 0.0000 | |
| 67 | R | B | -3.1602 | |
| 68 | A | B | -2.5609 | |
| 69 | A | B | -2.3362 | |
| 70 | A | B | 0.0000 | |
| 71 | E | B | -3.3596 | |
| 72 | E | B | -3.0030 | |
| 73 | A | B | 0.0000 | |
| 74 | A | B | -2.1484 | |
| 75 | A | B | -1.4627 | |
| 76 | T | B | -1.3894 | |
| 77 | G | B | -1.7462 | |
| 78 | D | B | -2.1860 | |
| 79 | R | B | -2.0026 | |
| 80 | A | B | -1.0464 | |
| 81 | A | B | -1.5640 | |
| 82 | L | B | 0.0000 | |
| 83 | L | B | 0.0021 | |
| 84 | E | B | -1.0670 | |
| 85 | A | B | 0.0000 | |
| 86 | T | B | -0.6228 | |
| 87 | R | B | -1.6548 | |
| 88 | L | B | 0.0000 | |
| 89 | I | B | -0.9638 | |
| 90 | G | B | -1.3995 | |
| 91 | E | B | -2.0786 | |
| 92 | L | B | 0.0000 | |
| 93 | A | B | -1.8880 | |
| 94 | R | B | -3.1799 | |
| 95 | A | B | -2.7360 | |
| 96 | I | B | 0.0000 | |
| 97 | K | B | -3.4595 | |
| 98 | E | B | -3.3118 | |
| 99 | A | B | -2.1035 | |
| 100 | V | B | 0.0000 | |
| 101 | G | B | -1.4137 | |
| 102 | S | B | -1.0428 | |
| 103 | G | B | -0.7560 | |
| 104 | C | B | 0.4179 |