| Chain sequence(s) |
A: MAAGSWKATRLLLAILVALVAFSYQVKRKTFIRIEEVSALESSVKETLEYVTDEYNKKSEDLYNFRILRILKIMKQVTGHLEYHITVEMQRTTCLKTETSLCDIQKGELHKKIQCYFSVYAIPWVEVFKILKKNCTDIS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:23)
[INFO] Main: Simulation completed successfully. (00:02:24)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.9727 | |
| 2 | A | A | 0.4447 | |
| 3 | A | A | 0.0937 | |
| 4 | G | A | -0.4234 | |
| 5 | S | A | -0.2866 | |
| 6 | W | A | -0.0344 | |
| 7 | K | A | -1.2972 | |
| 8 | A | A | -0.2155 | |
| 9 | T | A | 0.2061 | |
| 10 | R | A | -0.3415 | |
| 11 | L | A | 1.8987 | |
| 12 | L | A | 2.8966 | |
| 13 | L | A | 2.9743 | |
| 14 | A | A | 3.1771 | |
| 15 | I | A | 4.4694 | |
| 16 | L | A | 4.5875 | |
| 17 | V | A | 4.7213 | |
| 18 | A | A | 4.0449 | |
| 19 | L | A | 4.4747 | |
| 20 | V | A | 4.0018 | |
| 21 | A | A | 3.1894 | |
| 22 | F | A | 3.2920 | |
| 23 | S | A | 1.8377 | |
| 24 | Y | A | 0.9799 | |
| 25 | Q | A | -0.6434 | |
| 26 | V | A | -0.5091 | |
| 27 | K | A | -2.3296 | |
| 28 | R | A | -3.0521 | |
| 29 | K | A | -2.2288 | |
| 30 | T | A | -0.5372 | |
| 31 | F | A | 1.6201 | |
| 32 | I | A | 1.5285 | |
| 33 | R | A | 0.0483 | |
| 34 | I | A | 0.3406 | |
| 35 | E | A | -1.7376 | |
| 36 | E | A | -2.3861 | |
| 37 | V | A | -1.1329 | |
| 38 | S | A | -0.6547 | |
| 39 | A | A | -0.3841 | |
| 40 | L | A | 0.5774 | |
| 41 | E | A | -1.1301 | |
| 42 | S | A | -1.2970 | |
| 43 | S | A | -1.2411 | |
| 44 | V | A | 0.0000 | |
| 45 | K | A | -2.5226 | |
| 46 | E | A | -3.3288 | |
| 47 | T | A | 0.0000 | |
| 48 | L | A | 0.0000 | |
| 49 | E | A | -3.3043 | |
| 50 | Y | A | -2.2703 | |
| 51 | V | A | 0.0000 | |
| 52 | T | A | -2.3316 | |
| 53 | D | A | -3.3774 | |
| 54 | E | A | -2.6207 | |
| 55 | Y | A | 0.0000 | |
| 56 | N | A | 0.0000 | |
| 57 | K | A | -3.5918 | |
| 58 | K | A | -3.3568 | |
| 59 | S | A | -2.3975 | |
| 60 | E | A | -2.3240 | |
| 61 | D | A | -0.8738 | |
| 62 | L | A | 0.9619 | |
| 63 | Y | A | 0.1016 | |
| 64 | N | A | -1.1664 | |
| 65 | F | A | 0.0000 | |
| 66 | R | A | -2.4771 | |
| 67 | I | A | -1.1043 | |
| 68 | L | A | -0.4132 | |
| 69 | R | A | -1.1818 | |
| 70 | I | A | 0.2495 | |
| 71 | L | A | 0.3673 | |
| 72 | K | A | -1.0429 | |
| 73 | I | A | 0.0000 | |
| 74 | M | A | -1.3581 | |
| 75 | K | A | -1.0924 | |
| 76 | Q | A | -0.3497 | |
| 77 | V | A | 0.4645 | |
| 78 | T | A | 0.6540 | |
| 79 | G | A | -0.0845 | |
| 80 | H | A | -0.2649 | |
| 81 | L | A | -0.2307 | |
| 82 | E | A | -0.0892 | |
| 83 | Y | A | 0.0000 | |
| 84 | H | A | -0.6832 | |
| 85 | I | A | 0.0000 | |
| 86 | T | A | -0.2829 | |
| 87 | V | A | 0.0000 | |
| 88 | E | A | 0.0000 | |
| 89 | M | A | 0.0000 | |
| 90 | Q | A | -1.4487 | |
| 91 | R | A | -1.0711 | |
| 92 | T | A | 0.0000 | |
| 93 | T | A | -0.3628 | |
| 94 | C | A | 0.0000 | |
| 95 | L | A | 0.1988 | |
| 96 | K | A | -1.1303 | |
| 97 | T | A | -0.8577 | |
| 98 | E | A | -1.1716 | |
| 99 | T | A | -0.4616 | |
| 100 | S | A | 0.0799 | |
| 101 | L | A | 1.0206 | |
| 102 | C | A | -0.1912 | |
| 103 | D | A | -1.6766 | |
| 104 | I | A | -1.3618 | |
| 105 | Q | A | 0.0000 | |
| 106 | K | A | -2.5028 | |
| 107 | G | A | -2.0677 | |
| 108 | E | A | -2.1925 | |
| 109 | L | A | -0.9202 | |
| 110 | H | A | -1.7031 | |
| 111 | K | A | -1.6793 | |
| 112 | K | A | -1.4747 | |
| 113 | I | A | 0.0000 | |
| 114 | Q | A | -0.7588 | |
| 115 | C | A | 0.0000 | |
| 116 | Y | A | -0.6792 | |
| 117 | F | A | 0.0000 | |
| 118 | S | A | 0.0000 | |
| 119 | V | A | 0.0000 | |
| 120 | Y | A | -0.1213 | |
| 121 | A | A | 0.0000 | |
| 122 | I | A | 0.8936 | |
| 123 | P | A | 0.4303 | |
| 124 | W | A | 1.7594 | |
| 125 | V | A | 1.9644 | |
| 126 | E | A | -0.3202 | |
| 127 | V | A | 0.9848 | |
| 128 | F | A | -0.1774 | |
| 129 | K | A | -1.3420 | |
| 130 | I | A | -1.0298 | |
| 131 | L | A | -0.8696 | |
| 132 | K | A | -2.2970 | |
| 133 | K | A | -2.1497 | |
| 134 | N | A | -1.9016 | |
| 135 | C | A | -0.9085 | |
| 136 | T | A | -1.0734 | |
| 137 | D | A | -1.8294 | |
| 138 | I | A | -0.6915 | |
| 139 | S | A | -0.9410 |