Project name: query_structure

Status: done

Started: 2026-03-16 22:48:26
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Chain sequence(s) A: VSSVPTKLEVVAATPTSLLISWDARGVPIWWQVYYYRITYGETGGNSPVQEFTVPGSSSTATISGLKPGVDYTITVYAWGGWKWYSPISINYRT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:46)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:46)
Show buried residues

Minimal score value
-3.2379
Maximal score value
2.2572
Average score
-0.3785
Total score value
-35.5768

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 V A 1.6433
2 S A 0.4897
3 S A -0.0632
4 V A -0.2159
5 P A 0.0000
6 T A -1.5420
7 K A -2.3554
8 L A 0.0000
9 E A -1.2937
10 V A 0.2275
11 V A 1.5933
12 A A 0.9086
13 A A 0.2810
14 T A -0.5382
15 P A -1.1461
16 T A -0.9950
17 S A -0.5461
18 L A 0.0000
19 L A 0.7455
20 I A 0.0000
21 S A -0.3750
22 W A 0.0000
23 D A -1.6599
24 A A -1.3085
25 R A -1.8796
26 G A -0.7884
27 V A 0.1621
28 P A 0.9851
29 I A 2.2572
30 W A 2.1454
31 W A 1.4545
32 Q A 0.4437
33 V A 0.0000
34 Y A 1.2108
35 Y A 0.6778
36 Y A 0.0000
37 R A -0.4274
38 I A 0.0000
39 T A -0.5309
40 Y A -0.2567
41 G A 0.0000
42 E A -1.8662
43 T A -1.6512
44 G A -1.4100
45 G A -1.5088
46 N A -1.5055
47 S A -0.7898
48 P A -0.2865
49 V A 0.4694
50 Q A -0.8039
51 E A -1.6140
52 F A -0.6848
53 T A -0.2678
54 V A 0.0000
55 P A 0.0450
56 G A 0.1066
57 S A -0.2239
58 S A -0.2675
59 S A -0.4366
60 T A -0.0448
61 A A 0.0000
62 T A 0.2734
63 I A 0.0000
64 S A -0.6644
65 G A -1.0351
66 L A 0.0000
67 K A -2.5168
68 P A -1.8013
69 G A -1.6983
70 V A -1.9478
71 D A -3.2379
72 Y A 0.0000
73 T A -0.9968
74 I A 0.0000
75 T A -0.1674
76 V A 0.0000
77 Y A 0.2695
78 A A 0.0000
79 W A 0.5448
80 G A 0.0000
81 G A 0.3622
82 W A 0.6480
83 K A -0.5480
84 W A 0.1038
85 Y A 0.0000
86 S A -0.1653
87 P A -0.0140
88 I A -0.0156
89 S A -0.4773
90 I A -0.6139
91 N A -1.7963
92 Y A -1.8092
93 R A -3.0427
94 T A -1.7936
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Laboratory of Theory of Biopolymers 2018