| Chain sequence(s) |
A: VSSVPTKLEVVAATPTSLLISWDARGVPIWWQVYYYRITYGETGGNSPVQEFTVPGSSSTATISGLKPGVDYTITVYAWGGWKWYSPISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:46)
[INFO] Main: Simulation completed successfully. (00:00:46)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.6433 | |
| 2 | S | A | 0.4897 | |
| 3 | S | A | -0.0632 | |
| 4 | V | A | -0.2159 | |
| 5 | P | A | 0.0000 | |
| 6 | T | A | -1.5420 | |
| 7 | K | A | -2.3554 | |
| 8 | L | A | 0.0000 | |
| 9 | E | A | -1.2937 | |
| 10 | V | A | 0.2275 | |
| 11 | V | A | 1.5933 | |
| 12 | A | A | 0.9086 | |
| 13 | A | A | 0.2810 | |
| 14 | T | A | -0.5382 | |
| 15 | P | A | -1.1461 | |
| 16 | T | A | -0.9950 | |
| 17 | S | A | -0.5461 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.7455 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -0.3750 | |
| 22 | W | A | 0.0000 | |
| 23 | D | A | -1.6599 | |
| 24 | A | A | -1.3085 | |
| 25 | R | A | -1.8796 | |
| 26 | G | A | -0.7884 | |
| 27 | V | A | 0.1621 | |
| 28 | P | A | 0.9851 | |
| 29 | I | A | 2.2572 | |
| 30 | W | A | 2.1454 | |
| 31 | W | A | 1.4545 | |
| 32 | Q | A | 0.4437 | |
| 33 | V | A | 0.0000 | |
| 34 | Y | A | 1.2108 | |
| 35 | Y | A | 0.6778 | |
| 36 | Y | A | 0.0000 | |
| 37 | R | A | -0.4274 | |
| 38 | I | A | 0.0000 | |
| 39 | T | A | -0.5309 | |
| 40 | Y | A | -0.2567 | |
| 41 | G | A | 0.0000 | |
| 42 | E | A | -1.8662 | |
| 43 | T | A | -1.6512 | |
| 44 | G | A | -1.4100 | |
| 45 | G | A | -1.5088 | |
| 46 | N | A | -1.5055 | |
| 47 | S | A | -0.7898 | |
| 48 | P | A | -0.2865 | |
| 49 | V | A | 0.4694 | |
| 50 | Q | A | -0.8039 | |
| 51 | E | A | -1.6140 | |
| 52 | F | A | -0.6848 | |
| 53 | T | A | -0.2678 | |
| 54 | V | A | 0.0000 | |
| 55 | P | A | 0.0450 | |
| 56 | G | A | 0.1066 | |
| 57 | S | A | -0.2239 | |
| 58 | S | A | -0.2675 | |
| 59 | S | A | -0.4366 | |
| 60 | T | A | -0.0448 | |
| 61 | A | A | 0.0000 | |
| 62 | T | A | 0.2734 | |
| 63 | I | A | 0.0000 | |
| 64 | S | A | -0.6644 | |
| 65 | G | A | -1.0351 | |
| 66 | L | A | 0.0000 | |
| 67 | K | A | -2.5168 | |
| 68 | P | A | -1.8013 | |
| 69 | G | A | -1.6983 | |
| 70 | V | A | -1.9478 | |
| 71 | D | A | -3.2379 | |
| 72 | Y | A | 0.0000 | |
| 73 | T | A | -0.9968 | |
| 74 | I | A | 0.0000 | |
| 75 | T | A | -0.1674 | |
| 76 | V | A | 0.0000 | |
| 77 | Y | A | 0.2695 | |
| 78 | A | A | 0.0000 | |
| 79 | W | A | 0.5448 | |
| 80 | G | A | 0.0000 | |
| 81 | G | A | 0.3622 | |
| 82 | W | A | 0.6480 | |
| 83 | K | A | -0.5480 | |
| 84 | W | A | 0.1038 | |
| 85 | Y | A | 0.0000 | |
| 86 | S | A | -0.1653 | |
| 87 | P | A | -0.0140 | |
| 88 | I | A | -0.0156 | |
| 89 | S | A | -0.4773 | |
| 90 | I | A | -0.6139 | |
| 91 | N | A | -1.7963 | |
| 92 | Y | A | -1.8092 | |
| 93 | R | A | -3.0427 | |
| 94 | T | A | -1.7936 |