Project name: query_structure

Status: done

Started: 2026-03-16 23:26:27
Settings
Chain sequence(s) A: GLPTCGETCTLGKCNTPKCTCNWPICYKD
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:51)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:52)
Show buried residues

Minimal score value
-2.6174
Maximal score value
1.1512
Average score
-0.5811
Total score value
-16.8509

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A 0.2348
2 L A 1.0692
3 P A -0.2192
4 T A -0.1364
5 C A -0.7060
6 G A -0.3638
7 E A -0.8520
8 T A -0.0927
9 C A 0.0000
10 T A 0.5465
11 L A 1.1512
12 G A -0.0901
13 K A -1.4695
14 C A -1.3213
15 N A -1.8858
16 T A -1.4903
17 P A -1.6527
18 K A -2.6174
19 C A -2.0853
20 T A -1.1397
21 C A -0.1982
22 N A -0.3938
23 W A 0.8989
24 P A 0.6428
25 I A 0.5228
26 C A 0.0000
27 Y A -0.5166
28 K A -2.0856
29 D A -2.6007
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Laboratory of Theory of Biopolymers 2018