| Chain sequence(s) |
A: MLPAPKNLVVSRVTEDSARLSWTAPDAAFDSFRIRYVEVIAWGEAIWLVVPGSERSYDLTGLKPGTEYVVVIDGVKGGKTSIPLIAHFTT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:40)
[INFO] Main: Simulation completed successfully. (00:01:41)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 1.0759 | |
| 2 | L | A | 0.4826 | |
| 3 | P | A | 0.1485 | |
| 4 | A | A | 0.0937 | |
| 5 | P | A | 0.0000 | |
| 6 | K | A | -2.0137 | |
| 7 | N | A | -1.1477 | |
| 8 | L | A | 0.2400 | |
| 9 | V | A | 1.0735 | |
| 10 | V | A | 0.1522 | |
| 11 | S | A | -0.6382 | |
| 12 | R | A | -2.0142 | |
| 13 | V | A | -1.0297 | |
| 14 | T | A | -1.7828 | |
| 15 | E | A | -3.0406 | |
| 16 | D | A | -2.7517 | |
| 17 | S | A | -2.0845 | |
| 18 | A | A | 0.0000 | |
| 19 | R | A | -1.2519 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.3872 | |
| 22 | W | A | 0.0000 | |
| 23 | T | A | -1.2785 | |
| 24 | A | A | -1.4204 | |
| 25 | P | A | -1.4111 | |
| 26 | D | A | -2.2684 | |
| 27 | A | A | -1.4287 | |
| 28 | A | A | -1.1622 | |
| 29 | F | A | 0.0000 | |
| 30 | D | A | -2.6052 | |
| 31 | S | A | -1.1246 | |
| 32 | F | A | 0.0000 | |
| 33 | R | A | 0.0587 | |
| 34 | I | A | 0.0000 | |
| 35 | R | A | 0.5115 | |
| 36 | Y | A | 0.4654 | |
| 37 | V | A | 0.5560 | |
| 38 | E | A | 0.6755 | |
| 39 | V | A | 2.3751 | |
| 40 | I | A | 2.8129 | |
| 41 | A | A | 1.5454 | |
| 42 | W | A | 1.7241 | |
| 43 | G | A | 0.3683 | |
| 44 | E | A | -1.2463 | |
| 45 | A | A | -0.1319 | |
| 46 | I | A | 0.6909 | |
| 47 | W | A | 1.4958 | |
| 48 | L | A | 1.5635 | |
| 49 | V | A | 1.7526 | |
| 50 | V | A | 0.0000 | |
| 51 | P | A | -0.7954 | |
| 52 | G | A | 0.0000 | |
| 53 | S | A | -1.6011 | |
| 54 | E | A | -1.4930 | |
| 55 | R | A | -1.1445 | |
| 56 | S | A | -0.6697 | |
| 57 | Y | A | -0.7586 | |
| 58 | D | A | -1.6862 | |
| 59 | L | A | 0.0000 | |
| 60 | T | A | -1.3601 | |
| 61 | G | A | -1.5028 | |
| 62 | L | A | 0.0000 | |
| 63 | K | A | -2.9947 | |
| 64 | P | A | -2.5416 | |
| 65 | G | A | -1.8001 | |
| 66 | T | A | -1.1507 | |
| 67 | E | A | -0.6825 | |
| 68 | Y | A | 0.0000 | |
| 69 | V | A | 0.2865 | |
| 70 | V | A | 0.0000 | |
| 71 | V | A | 0.0000 | |
| 72 | I | A | 0.0000 | |
| 73 | D | A | 0.0000 | |
| 74 | G | A | 0.0000 | |
| 75 | V | A | -1.1587 | |
| 76 | K | A | -2.2072 | |
| 77 | G | A | -1.9117 | |
| 78 | G | A | -1.9202 | |
| 79 | K | A | -2.0780 | |
| 80 | T | A | -0.6980 | |
| 81 | S | A | 0.0000 | |
| 82 | I | A | 1.6687 | |
| 83 | P | A | 0.7350 | |
| 84 | L | A | 1.1055 | |
| 85 | I | A | 1.8171 | |
| 86 | A | A | 0.7531 | |
| 87 | H | A | -0.2951 | |
| 88 | F | A | 0.0000 | |
| 89 | T | A | -1.1036 | |
| 90 | T | A | -1.8535 |