| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIIKDGKVVVPKVSGWQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTIGHPLFNKLGDTENPTEPVHPGADDRVAFSFDPKQTQLFIVGCEPPTGEHWDLAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYVRNGPVGHPLPDAPPPSPLYVPPPPESPYAVRPPYDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLSTPEDNVYDPSNFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:02)
[INFO] Main: Simulation completed successfully. (00:00:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9487 | |
| 2 | L | A | 1.9726 | |
| 3 | P | A | 0.6560 | |
| 4 | P | A | 0.3636 | |
| 5 | T | A | 0.1186 | |
| 6 | T | A | 0.1351 | |
| 7 | P | A | 0.1774 | |
| 8 | V | A | 1.2159 | |
| 9 | A | A | 0.0368 | |
| 10 | K | A | -1.1413 | |
| 11 | V | A | -0.3852 | |
| 12 | Q | A | -1.5072 | |
| 13 | S | A | -1.5987 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4338 | |
| 16 | E | A | -2.4447 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4531 | |
| 20 | P | A | 0.1035 | |
| 21 | T | A | 0.1153 | |
| 22 | S | A | -0.1688 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | -0.0976 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.1534 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.6968 | |
| 31 | R | A | -2.5875 | |
| 32 | L | A | -0.7398 | |
| 33 | L | A | 1.2354 | |
| 34 | T | A | 1.4664 | |
| 35 | V | A | 2.0093 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.1706 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.5874 | |
| 40 | K | A | -1.5025 | |
| 41 | D | A | -0.6423 | |
| 42 | I | A | 1.0242 | |
| 43 | I | A | 1.1571 | |
| 44 | K | A | -1.3017 | |
| 45 | D | A | -2.3895 | |
| 46 | G | A | -1.4276 | |
| 47 | K | A | -1.0213 | |
| 48 | V | A | 1.5144 | |
| 49 | V | A | 2.0667 | |
| 50 | V | A | 1.3926 | |
| 51 | P | A | 0.6020 | |
| 52 | K | A | -0.5360 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | W | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1084 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4598 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2934 | |
| 70 | K | A | -1.8084 | |
| 71 | F | A | -0.6652 | |
| 72 | A | A | -0.5782 | |
| 73 | L | A | -0.9388 | |
| 74 | P | A | -1.2667 | |
| 75 | Q | A | -2.4798 | |
| 76 | K | A | -3.0923 | |
| 77 | D | A | -2.9833 | |
| 78 | F | A | -1.6410 | |
| 79 | Y | A | -1.9092 | |
| 80 | D | A | -2.7426 | |
| 81 | P | A | -2.4092 | |
| 82 | E | A | -3.0722 | |
| 83 | K | A | -3.4313 | |
| 84 | E | A | -2.4977 | |
| 85 | R | A | -1.3137 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6335 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9402 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3005 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6760 | |
| 99 | G | A | -0.5423 | |
| 100 | P | A | -0.4379 | |
| 101 | L | A | -0.0178 | |
| 102 | G | A | -0.2693 | |
| 103 | K | A | -0.7255 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.4552 | |
| 106 | I | A | 0.0000 | |
| 107 | G | A | 0.1502 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.4302 | |
| 110 | L | A | 0.3144 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.2150 | |
| 113 | K | A | -0.5460 | |
| 114 | L | A | -1.0381 | |
| 115 | G | A | -1.0571 | |
| 116 | D | A | -1.3751 | |
| 117 | T | A | -1.0194 | |
| 118 | E | A | -1.7688 | |
| 119 | N | A | -2.2671 | |
| 120 | P | A | -1.9444 | |
| 121 | T | A | -1.6061 | |
| 122 | E | A | -2.3159 | |
| 123 | P | A | -1.2189 | |
| 124 | V | A | -0.7802 | |
| 125 | H | A | -1.0978 | |
| 126 | P | A | -1.1172 | |
| 127 | G | A | -1.5047 | |
| 128 | A | A | -1.3049 | |
| 129 | D | A | -2.3219 | |
| 130 | D | A | -1.9169 | |
| 131 | R | A | -1.2341 | |
| 132 | V | A | 0.1952 | |
| 133 | A | A | 0.4404 | |
| 134 | F | A | 0.2787 | |
| 135 | S | A | -0.0744 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.7146 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | -0.2114 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5579 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2400 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1308 | |
| 157 | D | A | 0.2923 | |
| 158 | L | A | 0.7711 | |
| 159 | A | A | 0.1583 | |
| 160 | E | A | -1.4473 | |
| 161 | P | A | -0.1981 | |
| 162 | C | A | 0.1997 | |
| 163 | P | A | -0.1615 | |
| 164 | G | A | -0.0677 | |
| 165 | L | A | 0.6034 | |
| 166 | P | A | -0.1093 | |
| 167 | P | A | -0.3388 | |
| 168 | G | A | -0.4450 | |
| 169 | A | A | -0.0208 | |
| 170 | C | A | 0.6711 | |
| 171 | P | A | 0.5252 | |
| 172 | P | A | 0.7724 | |
| 173 | I | A | 1.9707 | |
| 174 | Q | A | 0.8278 | |
| 175 | L | A | 1.4814 | |
| 176 | V | A | 0.8373 | |
| 177 | N | A | -0.3529 | |
| 178 | S | A | 0.0084 | |
| 179 | V | A | 0.4019 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3731 | |
| 182 | D | A | 0.0803 | |
| 183 | G | A | -0.1603 | |
| 184 | D | A | -0.5702 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | -0.4896 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.0913 | |
| 190 | F | A | 0.0171 | |
| 191 | G | A | -0.1622 | |
| 192 | N | A | -0.3350 | |
| 193 | M | A | -0.1729 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.4210 | |
| 197 | E | A | -2.6259 | |
| 198 | L | A | -1.2339 | |
| 199 | Q | A | -2.5430 | |
| 200 | Q | A | -3.3425 | |
| 201 | D | A | -3.6026 | |
| 202 | R | A | -3.3396 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.1918 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3809 | |
| 211 | S | A | -1.8945 | |
| 212 | T | A | -1.4614 | |
| 213 | R | A | -2.1559 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.2171 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.2811 | |
| 220 | L | A | 0.4874 | |
| 221 | K | A | -1.3396 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.9781 | |
| 224 | N | A | -1.7069 | |
| 225 | E | A | -1.3309 | |
| 226 | A | A | -0.6661 | |
| 227 | Y | A | -0.4504 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.7123 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | -0.1445 | |
| 234 | F | A | 0.0240 | |
| 235 | G | A | -0.9097 | |
| 236 | R | A | -2.6388 | |
| 237 | R | A | -2.8699 | |
| 238 | E | A | -2.1257 | |
| 239 | Q | A | -0.1405 | |
| 240 | V | A | 1.5137 | |
| 241 | Y | A | 1.2172 | |
| 242 | A | A | 0.1325 | |
| 243 | R | A | -1.1997 | |
| 244 | H | A | -1.0725 | |
| 245 | F | A | -0.0266 | |
| 246 | Y | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | -0.6226 | |
| 249 | N | A | -1.1788 | |
| 250 | G | A | -0.8764 | |
| 251 | P | A | -0.7107 | |
| 252 | V | A | -0.6946 | |
| 253 | G | A | -0.9314 | |
| 254 | H | A | -1.1470 | |
| 255 | P | A | -0.9340 | |
| 256 | L | A | -0.2455 | |
| 257 | P | A | -0.8434 | |
| 258 | D | A | -1.9013 | |
| 259 | A | A | -0.6375 | |
| 260 | P | A | -0.6367 | |
| 261 | P | A | -0.1635 | |
| 262 | P | A | 0.0546 | |
| 263 | S | A | 0.2916 | |
| 264 | P | A | 0.6804 | |
| 265 | L | A | 1.8614 | |
| 266 | Y | A | 1.6923 | |
| 267 | V | A | 1.9039 | |
| 268 | P | A | 0.5578 | |
| 269 | P | A | 0.2180 | |
| 270 | P | A | -0.6432 | |
| 271 | P | A | -0.9088 | |
| 272 | E | A | -1.7214 | |
| 273 | S | A | -0.5176 | |
| 274 | P | A | -0.2218 | |
| 275 | Y | A | 0.9378 | |
| 276 | A | A | 0.5470 | |
| 277 | V | A | 1.3121 | |
| 278 | R | A | 0.2528 | |
| 279 | P | A | -0.1805 | |
| 280 | P | A | 0.0000 | |
| 281 | Y | A | 0.0533 | |
| 282 | D | A | -0.3741 | |
| 283 | Y | A | 1.0444 | |
| 284 | F | A | 0.7936 | |
| 285 | G | A | 0.1847 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9165 | |
| 291 | L | A | 1.6277 | |
| 292 | V | A | 0.6397 | |
| 293 | S | A | -0.1391 | |
| 294 | S | A | -0.9665 | |
| 295 | D | A | -1.8366 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.0959 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.5859 | |
| 301 | R | A | -1.8002 | |
| 302 | P | A | -0.9223 | |
| 303 | F | A | -0.1581 | |
| 304 | W | A | -0.5018 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0789 | |
| 307 | R | A | -2.9255 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.7846 | |
| 310 | G | A | -1.4230 | |
| 311 | N | A | -1.3885 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.9223 | |
| 319 | N | A | -0.9981 | |
| 320 | E | A | -1.0488 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3619 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.1546 | |
| 333 | N | A | 0.4419 | |
| 334 | F | A | 1.4798 | |
| 335 | T | A | 0.7450 | |
| 336 | I | A | 0.3778 | |
| 337 | S | A | -1.0642 | |
| 338 | Q | A | -1.9256 | |
| 339 | Q | A | -1.6716 | |
| 340 | L | A | 0.1731 | |
| 341 | S | A | -0.3072 | |
| 342 | T | A | -1.0144 | |
| 343 | P | A | -1.5785 | |
| 344 | E | A | -2.8051 | |
| 345 | D | A | -2.5217 | |
| 346 | N | A | -1.5306 | |
| 347 | V | A | 0.6525 | |
| 348 | Y | A | 1.0780 | |
| 349 | D | A | -0.1534 | |
| 350 | P | A | -0.7476 | |
| 351 | S | A | -0.6360 | |
| 352 | N | A | -0.8091 | |
| 353 | F | A | -1.1777 | |
| 354 | K | A | -2.0515 | |
| 355 | N | A | -1.8263 | |
| 356 | Y | A | -0.1416 | |
| 357 | L | A | 0.5664 | |
| 358 | R | A | 0.9101 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.4742 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0093 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -1.9036 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6633 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3111 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3129 | |
| 376 | L | A | -1.7381 | |
| 377 | D | A | -2.0037 | |
| 378 | P | A | -1.0523 | |
| 379 | G | A | -1.0126 | |
| 380 | V | A | -0.9217 | |
| 381 | L | A | -0.5329 | |
| 382 | A | A | -0.6559 | |
| 383 | H | A | -0.8379 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.3931 | |
| 386 | T | A | -0.5715 | |
| 387 | M | A | -0.3287 | |
| 388 | N | A | -0.8688 | |
| 389 | P | A | -1.2704 | |
| 390 | T | A | -1.5510 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.5483 | |
| 393 | E | A | -2.9448 | |
| 394 | N | A | -2.7133 | |
| 395 | W | A | -1.5583 | |
| 396 | N | A | -1.2653 | |
| 397 | L | A | -0.2460 | |
| 398 | G | A | 0.4864 | |
| 399 | F | A | 2.4080 | |
| 400 | V | A | 1.8404 | |
| 401 | P | A | 0.0483 | |
| 402 | P | A | -1.9522 | |
| 403 | K | A | -3.4359 | |
| 404 | E | A | -3.9228 | |
| 405 | R | A | -4.2692 | |
| 406 | E | A | -3.9197 | |
| 407 | D | A | -2.9080 | |
| 408 | P | A | -1.7813 | |
| 409 | Y | A | -0.9852 | |
| 410 | K | A | -2.0940 | |
| 411 | G | A | -0.6422 | |
| 412 | L | A | 0.6555 | |
| 413 | I | A | 1.5777 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3871 | |
| 416 | E | A | -1.6443 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.8357 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.8895 | |
| 421 | E | A | -2.5004 | |
| 422 | R | A | -2.0008 | |
| 423 | F | A | -1.0234 | |
| 424 | S | A | -1.3222 | |
| 425 | Q | A | -1.7577 | |
| 426 | D | A | -2.8936 | |
| 427 | L | A | -1.9865 | |
| 428 | D | A | -2.7758 | |
| 429 | Q | A | -2.6085 | |
| 430 | F | A | -1.4293 | |
| 431 | A | A | -0.8832 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.5362 | |
| 435 | K | A | -0.6945 | |
| 436 | F | A | 0.1732 | |
| 437 | L | A | 1.0471 | |
| 438 | Y | A | 0.8405 | |
| 439 | Q | A | -0.2584 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine