| Chain sequence(s) |
A: VGSLNCIVAVSQNMMGIGKNGDLPWPPPLRNEFRYFQRRMTTTSSVEGKQNLVIMGKKTWFSIPEKNRPLKGRINLVLSRELKEPPQGAHFLSRSLDDDALKLTEQPELANKVDMVWIVGGSSVYKEAMNNHPGHLKLFVTRIMQDFESDTFFPEIDLEKYKLLPEYPGVLSDVQEEEKGIKYKFEVYEKND
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:35)
[INFO] Main: Simulation completed successfully. (00:02:36)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 0.7009 | |
| 2 | G | A | 0.5314 | |
| 3 | S | A | 0.0547 | |
| 4 | L | A | 0.1028 | |
| 5 | N | A | 0.0000 | |
| 6 | C | A | 0.0000 | |
| 7 | I | A | 0.0000 | |
| 8 | V | A | 0.0000 | |
| 9 | A | A | -0.0141 | |
| 10 | V | A | 0.0000 | |
| 11 | S | A | 0.0000 | |
| 12 | Q | A | -2.2072 | |
| 13 | N | A | -1.5674 | |
| 14 | M | A | -0.8774 | |
| 15 | G | A | 0.0000 | |
| 16 | I | A | -0.3148 | |
| 17 | G | A | -1.4365 | |
| 18 | K | A | -2.6053 | |
| 19 | N | A | -2.8010 | |
| 20 | G | A | -2.2371 | |
| 21 | D | A | -2.5110 | |
| 22 | L | A | -1.0273 | |
| 23 | P | A | 0.0000 | |
| 24 | W | A | 0.0000 | |
| 25 | P | A | -0.8598 | |
| 26 | P | A | -0.9432 | |
| 27 | L | A | 0.0000 | |
| 28 | R | A | -2.5298 | |
| 29 | N | A | -1.9895 | |
| 30 | E | A | 0.0000 | |
| 31 | F | A | -1.3034 | |
| 32 | R | A | -2.7005 | |
| 33 | Y | A | 0.0000 | |
| 34 | F | A | -1.0083 | |
| 35 | Q | A | -2.1317 | |
| 36 | R | A | -2.4276 | |
| 37 | M | A | -1.1063 | |
| 38 | T | A | 0.0000 | |
| 39 | T | A | -1.3788 | |
| 40 | T | A | -0.9543 | |
| 41 | S | A | -1.0294 | |
| 42 | S | A | -0.5638 | |
| 43 | V | A | -0.8395 | |
| 44 | E | A | -2.1917 | |
| 45 | G | A | -2.1311 | |
| 46 | K | A | -2.2251 | |
| 47 | Q | A | -2.0248 | |
| 48 | N | A | 0.0000 | |
| 49 | L | A | 0.0000 | |
| 50 | V | A | 0.0000 | |
| 51 | I | A | 0.0000 | |
| 52 | M | A | 0.0000 | |
| 53 | G | A | -0.7790 | |
| 54 | K | A | -1.7696 | |
| 55 | K | A | -1.8568 | |
| 56 | T | A | -0.9430 | |
| 57 | W | A | 0.0000 | |
| 58 | F | A | -0.1302 | |
| 59 | S | A | -0.9562 | |
| 60 | I | A | -1.0855 | |
| 61 | P | A | -1.7399 | |
| 62 | E | A | -3.1644 | |
| 63 | K | A | -3.3756 | |
| 64 | N | A | -3.2608 | |
| 65 | R | A | -2.5386 | |
| 66 | P | A | -2.0945 | |
| 67 | L | A | 0.0000 | |
| 68 | K | A | -2.3677 | |
| 69 | G | A | -1.6124 | |
| 70 | R | A | -1.2464 | |
| 71 | I | A | -0.7532 | |
| 72 | N | A | 0.0000 | |
| 73 | L | A | 0.0000 | |
| 74 | V | A | 0.0000 | |
| 75 | L | A | -1.4267 | |
| 76 | S | A | 0.0000 | |
| 77 | R | A | -3.5791 | |
| 78 | E | A | -3.5797 | |
| 79 | L | A | -2.8729 | |
| 80 | K | A | -3.3913 | |
| 81 | E | A | -3.0282 | |
| 82 | P | A | -1.7779 | |
| 83 | P | A | 0.0000 | |
| 84 | Q | A | -2.0193 | |
| 85 | G | A | -1.7558 | |
| 86 | A | A | 0.0000 | |
| 87 | H | A | -1.2909 | |
| 88 | F | A | -0.2672 | |
| 89 | L | A | -1.2511 | |
| 90 | S | A | 0.0000 | |
| 91 | R | A | -3.0981 | |
| 92 | S | A | -2.1615 | |
| 93 | L | A | 0.0000 | |
| 94 | D | A | -2.4244 | |
| 95 | D | A | -2.8132 | |
| 96 | A | A | 0.0000 | |
| 97 | L | A | -1.5354 | |
| 98 | K | A | -2.9396 | |
| 99 | L | A | -2.0403 | |
| 100 | T | A | 0.0000 | |
| 101 | E | A | -2.6447 | |
| 102 | Q | A | -2.4746 | |
| 103 | P | A | -2.1287 | |
| 104 | E | A | -2.4795 | |
| 105 | L | A | 0.0000 | |
| 106 | A | A | -2.1115 | |
| 107 | N | A | -2.5821 | |
| 108 | K | A | -2.6703 | |
| 109 | V | A | 0.0000 | |
| 110 | D | A | 0.0000 | |
| 111 | M | A | 0.1097 | |
| 112 | V | A | 0.0000 | |
| 113 | W | A | 0.0000 | |
| 114 | I | A | 0.0000 | |
| 115 | V | A | 0.2067 | |
| 116 | G | A | 0.0000 | |
| 117 | G | A | -0.5368 | |
| 118 | S | A | -0.3171 | |
| 119 | S | A | -0.9370 | |
| 120 | V | A | 0.0000 | |
| 121 | Y | A | 0.0000 | |
| 122 | K | A | -2.6266 | |
| 123 | E | A | -2.2955 | |
| 124 | A | A | 0.0000 | |
| 125 | M | A | 0.0000 | |
| 126 | N | A | -2.5128 | |
| 127 | H | A | -1.8349 | |
| 128 | P | A | -1.6422 | |
| 129 | G | A | -1.8180 | |
| 130 | H | A | -1.9420 | |
| 131 | L | A | 0.0000 | |
| 132 | K | A | -0.6937 | |
| 133 | L | A | 0.0000 | |
| 134 | F | A | 0.0000 | |
| 135 | V | A | 0.0000 | |
| 136 | T | A | 0.0000 | |
| 137 | R | A | -1.4882 | |
| 138 | I | A | 0.0000 | |
| 139 | M | A | -1.5908 | |
| 140 | Q | A | -2.0226 | |
| 141 | D | A | -2.8065 | |
| 142 | F | A | -2.1226 | |
| 143 | E | A | -2.7163 | |
| 144 | S | A | -2.2668 | |
| 145 | D | A | -2.5464 | |
| 146 | T | A | -0.9061 | |
| 147 | F | A | 0.5499 | |
| 148 | F | A | 0.0000 | |
| 149 | P | A | -1.1657 | |
| 150 | E | A | -1.9559 | |
| 151 | I | A | -2.0866 | |
| 152 | D | A | -2.8546 | |
| 153 | L | A | -1.2044 | |
| 154 | E | A | -2.7458 | |
| 155 | K | A | -3.7076 | |
| 156 | Y | A | 0.0000 | |
| 157 | K | A | -1.9371 | |
| 158 | L | A | 0.1096 | |
| 159 | L | A | -0.4237 | |
| 160 | P | A | -0.9463 | |
| 161 | E | A | -1.6254 | |
| 162 | Y | A | -0.5665 | |
| 163 | P | A | -0.4916 | |
| 164 | G | A | -0.3140 | |
| 165 | V | A | 0.0430 | |
| 166 | L | A | 0.5668 | |
| 167 | S | A | -0.7695 | |
| 168 | D | A | -1.4115 | |
| 169 | V | A | -1.0253 | |
| 170 | Q | A | -1.6819 | |
| 171 | E | A | -3.0380 | |
| 172 | E | A | -2.9564 | |
| 173 | K | A | -2.9604 | |
| 174 | G | A | -2.1930 | |
| 175 | I | A | 0.0000 | |
| 176 | K | A | -2.6281 | |
| 177 | Y | A | 0.0000 | |
| 178 | K | A | -1.3542 | |
| 179 | F | A | 0.0000 | |
| 180 | E | A | 0.0000 | |
| 181 | V | A | 0.0000 | |
| 182 | Y | A | 0.0000 | |
| 183 | E | A | -1.3292 | |
| 184 | K | A | 0.0000 | |
| 185 | N | A | -3.0921 | |
| 186 | D | A | -3.0717 |