Project name: query_structure

Status: done

Started: 2026-03-17 01:02:21
Settings
Chain sequence(s) A: SIPCGESCVFIPCTVTALLGCSCKSKVCYKN
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:16)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:16)
Show buried residues

Minimal score value
-1.8192
Maximal score value
2.9777
Average score
0.5505
Total score value
17.0664

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 S A -0.2236
2 I A 1.3329
3 P A 0.2499
4 C A 0.5822
5 G A -0.2755
6 E A 0.1501
7 S A 0.3787
8 C A 1.0001
9 V A 1.6780
10 F A 2.9777
11 I A 2.9425
12 P A 1.5043
13 C A 1.3909
14 T A 1.5829
15 V A 2.5624
16 T A 0.0000
17 A A 1.6520
18 L A 2.6534
19 L A 2.2697
20 G A 0.6376
21 C A 0.4355
22 S A -0.5659
23 C A -0.3340
24 K A -1.8192
25 S A -1.3514
26 K A -1.1196
27 V A -0.5288
28 C A 0.0000
29 Y A -0.5101
30 K A -0.7917
31 N A -1.3946
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Laboratory of Theory of Biopolymers 2018