| Chain sequence(s) |
A: KVEQAVETEPEPELRQQTEWQSGQRWELALGRFWDYLRWVQTLSEQVQEELLSSQVTQELRALMDETMKELKAYKSELEEQLTPVAEETRARLSKELQAAQARLGADMEDVCGRLVQYRGEVQAMLGQSTEELRVRLASHLRKLRKRLLRDADDLQKRLAVYQAGAREGAERGLSAIRERLGPLVEQGRVRAATVGSLAGQPLQERAQAWGERLRARMEEMGSRTRDRLDEVKEQVAEVRAKLEEQAQQIRLQAEAFQARLKSWFEPLVEDMQRQWAGLVEKVQAAVGTSAAPVPSDNH
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:09:48)
[INFO] Main: Simulation completed successfully. (00:09:50)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | K | A | -1.4385 | |
| 2 | V | A | -0.1937 | |
| 3 | E | A | -1.7371 | |
| 4 | Q | A | -1.5886 | |
| 5 | A | A | -0.5130 | |
| 6 | V | A | 0.0740 | |
| 7 | E | A | -1.6671 | |
| 8 | T | A | -1.6157 | |
| 9 | E | A | -2.6883 | |
| 10 | P | A | -2.3862 | |
| 11 | E | A | -3.1467 | |
| 12 | P | A | -2.8421 | |
| 13 | E | A | -3.0396 | |
| 14 | L | A | -1.7899 | |
| 15 | R | A | -3.4128 | |
| 16 | Q | A | -3.5100 | |
| 17 | Q | A | -2.9675 | |
| 18 | T | A | -2.6022 | |
| 19 | E | A | -3.0782 | |
| 20 | W | A | -2.0799 | |
| 21 | Q | A | -1.9471 | |
| 22 | S | A | -1.4651 | |
| 23 | G | A | -1.5014 | |
| 24 | Q | A | -1.6469 | |
| 25 | R | A | -2.4249 | |
| 26 | W | A | 0.0000 | |
| 27 | E | A | -1.1805 | |
| 28 | L | A | -1.0064 | |
| 29 | A | A | 0.0000 | |
| 30 | L | A | 0.0000 | |
| 31 | G | A | -1.5573 | |
| 32 | R | A | -2.5554 | |
| 33 | F | A | 0.0000 | |
| 34 | W | A | -1.4501 | |
| 35 | D | A | -2.8105 | |
| 36 | Y | A | -1.8206 | |
| 37 | L | A | 0.0000 | |
| 38 | R | A | -2.7353 | |
| 39 | W | A | -1.0068 | |
| 40 | V | A | 0.0000 | |
| 41 | Q | A | -1.3814 | |
| 42 | T | A | -0.7964 | |
| 43 | L | A | -0.9176 | |
| 44 | S | A | -1.6157 | |
| 45 | E | A | -2.9804 | |
| 46 | Q | A | -2.8633 | |
| 47 | V | A | 0.0000 | |
| 48 | Q | A | -2.1654 | |
| 49 | E | A | -2.8448 | |
| 50 | E | A | -1.9725 | |
| 51 | L | A | 0.0000 | |
| 52 | L | A | -0.5007 | |
| 53 | S | A | -0.8440 | |
| 54 | S | A | -1.3013 | |
| 55 | Q | A | -2.4194 | |
| 56 | V | A | 0.0000 | |
| 57 | T | A | 0.0000 | |
| 58 | Q | A | -2.8011 | |
| 59 | E | A | -2.8887 | |
| 60 | L | A | 0.0000 | |
| 61 | R | A | -3.2707 | |
| 62 | A | A | -2.3594 | |
| 63 | L | A | -2.3541 | |
| 64 | M | A | 0.0000 | |
| 65 | D | A | -3.6121 | |
| 66 | E | A | -3.6858 | |
| 67 | T | A | 0.0000 | |
| 68 | M | A | 0.0000 | |
| 69 | K | A | -3.4754 | |
| 70 | E | A | 0.0000 | |
| 71 | L | A | 0.0000 | |
| 72 | K | A | -2.8753 | |
| 73 | A | A | -2.0684 | |
| 74 | Y | A | -2.1340 | |
| 75 | K | A | -2.0275 | |
| 76 | S | A | -2.4530 | |
| 77 | E | A | -3.2429 | |
| 78 | L | A | 0.0000 | |
| 79 | E | A | -2.8526 | |
| 80 | E | A | -3.4687 | |
| 81 | Q | A | -3.0801 | |
| 82 | L | A | 0.0000 | |
| 83 | T | A | -1.1580 | |
| 84 | P | A | -1.2585 | |
| 85 | V | A | -1.5947 | |
| 86 | A | A | -1.4153 | |
| 87 | E | A | -3.0190 | |
| 88 | E | A | -3.1884 | |
| 89 | T | A | -2.3694 | |
| 90 | R | A | -2.6515 | |
| 91 | A | A | -2.7447 | |
| 92 | R | A | -3.5521 | |
| 93 | L | A | -1.9631 | |
| 94 | S | A | -2.4767 | |
| 95 | K | A | -3.1964 | |
| 96 | E | A | -2.6697 | |
| 97 | L | A | 0.0000 | |
| 98 | Q | A | -2.6317 | |
| 99 | A | A | -1.7009 | |
| 100 | A | A | 0.0000 | |
| 101 | Q | A | -1.6858 | |
| 102 | A | A | -1.1851 | |
| 103 | R | A | -2.1099 | |
| 104 | L | A | 0.0000 | |
| 105 | G | A | -1.5101 | |
| 106 | A | A | -1.6623 | |
| 107 | D | A | 0.0000 | |
| 108 | M | A | 0.0000 | |
| 109 | E | A | -3.3253 | |
| 110 | D | A | -2.7944 | |
| 111 | V | A | 0.0000 | |
| 112 | C | A | 0.0000 | |
| 113 | G | A | -1.8055 | |
| 114 | R | A | -1.6384 | |
| 115 | L | A | 0.0000 | |
| 116 | V | A | -0.1582 | |
| 117 | Q | A | -1.1578 | |
| 118 | Y | A | 0.0000 | |
| 119 | R | A | -0.8440 | |
| 120 | G | A | -0.8219 | |
| 121 | E | A | -0.7804 | |
| 122 | V | A | 0.0000 | |
| 123 | Q | A | -0.9198 | |
| 124 | A | A | -0.0140 | |
| 125 | M | A | 0.8248 | |
| 126 | L | A | 1.2167 | |
| 127 | G | A | 0.0765 | |
| 128 | Q | A | -1.1142 | |
| 129 | S | A | -1.3646 | |
| 130 | T | A | -1.2994 | |
| 131 | E | A | -2.3229 | |
| 132 | E | A | -1.9042 | |
| 133 | L | A | 0.0000 | |
| 134 | R | A | -0.9201 | |
| 135 | V | A | 0.1180 | |
| 136 | R | A | -1.3649 | |
| 137 | L | A | 0.0000 | |
| 138 | A | A | -0.9149 | |
| 139 | S | A | -1.4578 | |
| 140 | H | A | -1.9198 | |
| 141 | L | A | 0.0000 | |
| 142 | R | A | -3.7893 | |
| 143 | K | A | -3.3476 | |
| 144 | L | A | 0.0000 | |
| 145 | R | A | -2.8979 | |
| 146 | K | A | -3.2649 | |
| 147 | R | A | -3.3092 | |
| 148 | L | A | 0.0000 | |
| 149 | L | A | -1.6038 | |
| 150 | R | A | -2.8091 | |
| 151 | D | A | 0.0000 | |
| 152 | A | A | 0.0000 | |
| 153 | D | A | -2.4278 | |
| 154 | D | A | -2.2485 | |
| 155 | L | A | 0.0000 | |
| 156 | Q | A | -1.7045 | |
| 157 | K | A | -2.0074 | |
| 158 | R | A | -1.2895 | |
| 159 | L | A | 0.0000 | |
| 160 | A | A | -0.0500 | |
| 161 | V | A | 0.8772 | |
| 162 | Y | A | 0.0000 | |
| 163 | Q | A | -0.8064 | |
| 164 | A | A | -0.5894 | |
| 165 | G | A | -0.9302 | |
| 166 | A | A | -1.9834 | |
| 167 | R | A | -3.2862 | |
| 168 | E | A | -3.4094 | |
| 169 | G | A | -2.4515 | |
| 170 | A | A | -2.4572 | |
| 171 | E | A | -3.2453 | |
| 172 | R | A | -3.0574 | |
| 173 | G | A | -1.5278 | |
| 174 | L | A | -0.8636 | |
| 175 | S | A | -1.6773 | |
| 176 | A | A | -1.4667 | |
| 177 | I | A | -0.5455 | |
| 178 | R | A | -2.1680 | |
| 179 | E | A | -2.7125 | |
| 180 | R | A | -1.9577 | |
| 181 | L | A | -0.5641 | |
| 182 | G | A | -1.0857 | |
| 183 | P | A | -0.8864 | |
| 184 | L | A | 0.5675 | |
| 185 | V | A | 0.4593 | |
| 186 | E | A | -1.3884 | |
| 187 | Q | A | -1.5169 | |
| 188 | G | A | -1.2993 | |
| 189 | R | A | -1.9511 | |
| 190 | V | A | -0.6663 | |
| 191 | R | A | -1.6079 | |
| 192 | A | A | -0.9505 | |
| 193 | A | A | -0.2247 | |
| 194 | T | A | 0.3228 | |
| 195 | V | A | 1.3343 | |
| 196 | G | A | 0.2365 | |
| 197 | S | A | 0.8338 | |
| 198 | L | A | 1.5288 | |
| 199 | A | A | 0.3625 | |
| 200 | G | A | -0.5355 | |
| 201 | Q | A | -1.5598 | |
| 202 | P | A | -1.5234 | |
| 203 | L | A | -0.9222 | |
| 204 | Q | A | -2.5016 | |
| 205 | E | A | -3.2999 | |
| 206 | R | A | -2.6998 | |
| 207 | A | A | -2.0411 | |
| 208 | Q | A | -2.6763 | |
| 209 | A | A | -2.3364 | |
| 210 | W | A | -1.2559 | |
| 211 | G | A | -1.8953 | |
| 212 | E | A | -2.9263 | |
| 213 | R | A | -2.6718 | |
| 214 | L | A | -1.9416 | |
| 215 | R | A | -3.0276 | |
| 216 | A | A | -2.5970 | |
| 217 | R | A | -2.3794 | |
| 218 | M | A | -1.6253 | |
| 219 | E | A | -2.8947 | |
| 220 | E | A | -2.7710 | |
| 221 | M | A | -1.6557 | |
| 222 | G | A | -2.2866 | |
| 223 | S | A | -3.0705 | |
| 224 | R | A | -3.9667 | |
| 225 | T | A | -3.6154 | |
| 226 | R | A | -4.5105 | |
| 227 | D | A | -5.2735 | |
| 228 | R | A | -5.1153 | |
| 229 | L | A | -3.9584 | |
| 230 | D | A | -5.3510 | |
| 231 | E | A | -5.0280 | |
| 232 | V | A | -3.3878 | |
| 233 | K | A | -3.9619 | |
| 234 | E | A | -4.4431 | |
| 235 | Q | A | -3.0990 | |
| 236 | V | A | -1.8394 | |
| 237 | A | A | -2.3113 | |
| 238 | E | A | -2.9459 | |
| 239 | V | A | -1.4499 | |
| 240 | R | A | -2.7370 | |
| 241 | A | A | -2.7179 | |
| 242 | K | A | -3.0625 | |
| 243 | L | A | -2.0184 | |
| 244 | E | A | -3.7779 | |
| 245 | E | A | -4.0315 | |
| 246 | Q | A | -2.9964 | |
| 247 | A | A | -2.3704 | |
| 248 | Q | A | -2.8141 | |
| 249 | Q | A | -2.2757 | |
| 250 | I | A | -0.7843 | |
| 251 | R | A | -2.1659 | |
| 252 | L | A | -0.7289 | |
| 253 | Q | A | -1.0994 | |
| 254 | A | A | -1.2209 | |
| 255 | E | A | -2.0629 | |
| 256 | A | A | -1.1108 | |
| 257 | F | A | -0.6432 | |
| 258 | Q | A | -1.6592 | |
| 259 | A | A | -1.5918 | |
| 260 | R | A | -1.6817 | |
| 261 | L | A | -0.9074 | |
| 262 | K | A | -1.6892 | |
| 263 | S | A | -0.7627 | |
| 264 | W | A | 0.8484 | |
| 265 | F | A | 1.1835 | |
| 266 | E | A | -0.9345 | |
| 267 | P | A | -0.4960 | |
| 268 | L | A | 0.9524 | |
| 269 | V | A | 0.1105 | |
| 270 | E | A | -2.4688 | |
| 271 | D | A | -2.5912 | |
| 272 | M | A | -1.2091 | |
| 273 | Q | A | -2.1894 | |
| 274 | R | A | -2.7057 | |
| 275 | Q | A | -1.7097 | |
| 276 | W | A | -0.2154 | |
| 277 | A | A | -0.4293 | |
| 278 | G | A | -0.5203 | |
| 279 | L | A | 0.7256 | |
| 280 | V | A | 1.1126 | |
| 281 | E | A | -1.0573 | |
| 282 | K | A | -0.8481 | |
| 283 | V | A | 1.0715 | |
| 284 | Q | A | -0.3642 | |
| 285 | A | A | -0.3092 | |
| 286 | A | A | 0.4441 | |
| 287 | V | A | 1.1186 | |
| 288 | G | A | 0.0787 | |
| 289 | T | A | 0.0265 | |
| 290 | S | A | 0.1234 | |
| 291 | A | A | 0.2270 | |
| 292 | A | A | 0.2131 | |
| 293 | P | A | 0.6381 | |
| 294 | V | A | 1.4931 | |
| 295 | P | A | 0.0561 | |
| 296 | S | A | -1.1766 | |
| 297 | D | A | -2.8038 | |
| 298 | N | A | -2.7181 | |
| 299 | H | A | -1.9898 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine