| Chain sequence(s) |
A: EGRTCESPSKKYKGYCIHSSNCAKICRTKGFTGGECKGSFHRRCMCTKNCA
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:22)
[INFO] Main: Simulation completed successfully. (00:01:22)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -2.6684 | |
| 2 | G | A | -2.6034 | |
| 3 | R | A | -3.1278 | |
| 4 | T | A | -2.3728 | |
| 5 | C | A | -1.8007 | |
| 6 | E | A | -2.4294 | |
| 7 | S | A | -1.2851 | |
| 8 | P | A | -1.7118 | |
| 9 | S | A | -2.1220 | |
| 10 | K | A | -2.5366 | |
| 11 | K | A | -2.2926 | |
| 12 | Y | A | -1.9878 | |
| 13 | K | A | -2.2929 | |
| 14 | G | A | -0.9928 | |
| 15 | Y | A | 0.3452 | |
| 16 | C | A | 0.0000 | |
| 17 | I | A | 0.9063 | |
| 18 | H | A | -0.4033 | |
| 19 | S | A | -1.4115 | |
| 20 | S | A | -1.1621 | |
| 21 | N | A | -1.2781 | |
| 22 | C | A | 0.0000 | |
| 23 | A | A | -1.8895 | |
| 24 | K | A | -2.4172 | |
| 25 | I | A | -2.0665 | |
| 26 | C | A | 0.0000 | |
| 27 | R | A | -2.8576 | |
| 28 | T | A | -1.9950 | |
| 29 | K | A | -2.5013 | |
| 30 | G | A | -1.6703 | |
| 31 | F | A | -1.8573 | |
| 32 | T | A | -1.4868 | |
| 33 | G | A | -1.7644 | |
| 34 | G | A | -1.9420 | |
| 35 | E | A | -2.1893 | |
| 36 | C | A | 0.0000 | |
| 37 | K | A | -2.2486 | |
| 38 | G | A | -1.7386 | |
| 39 | S | A | -0.4470 | |
| 40 | F | A | 0.7955 | |
| 41 | H | A | -0.8560 | |
| 42 | R | A | -1.8496 | |
| 43 | R | A | -2.6564 | |
| 44 | C | A | 0.0000 | |
| 45 | M | A | -1.8308 | |
| 46 | C | A | 0.0000 | |
| 47 | T | A | -1.8229 | |
| 48 | K | A | -2.3774 | |
| 49 | N | A | -2.6039 | |
| 50 | C | A | -1.5793 | |
| 51 | A | A | -0.6250 |