| Chain sequence(s) |
A: PALPEDGGSGAFPPGHFKDPKMLYCKNGGFFLRIHPDGRVDGVREKSDPHIKLQLQAEERGVVSIKGVCANRYLAMKEDGRLLAHKLVTDECFFFERLESNNYNTYRSRKYTSWYVALKRTGQYKLGSKTGPGQKAILFLPMSAKS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Mutated residues | KV26A,KM135A |
| Energy difference between WT (input) and mutated protein (by FoldX) | 1.27211 kcal/mol
CAUTION: Your mutation/s can destabilize the protein structure |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] FoldX: Building mutant model (00:02:23)
[INFO] FoldX: Starting FoldX energy minimalization (00:02:43)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:44)
[INFO] Main: Simulation completed successfully. (00:03:45)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | P | A | 0.1362 | |
| 2 | A | A | -0.0449 | |
| 3 | L | A | 0.3576 | |
| 4 | P | A | -1.1937 | |
| 5 | E | A | -2.4623 | |
| 6 | D | A | -2.8085 | |
| 7 | G | A | -1.9870 | |
| 8 | G | A | -1.9720 | |
| 9 | S | A | -0.9500 | |
| 10 | G | A | -1.2632 | |
| 11 | A | A | -0.1813 | |
| 12 | F | A | 0.4881 | |
| 13 | P | A | 0.0517 | |
| 14 | P | A | -0.2910 | |
| 15 | G | A | -0.6690 | |
| 16 | H | A | -0.8403 | |
| 17 | F | A | 0.0957 | |
| 18 | K | A | -1.5647 | |
| 19 | D | A | -1.6371 | |
| 20 | P | A | -1.3094 | |
| 21 | K | A | -0.8898 | |
| 22 | M | A | 0.0000 | |
| 23 | L | A | 0.0000 | |
| 24 | Y | A | 0.3612 | |
| 25 | C | A | 0.0000 | |
| 26 | V | A | 0.9388 | mutated: KV26A |
| 27 | N | A | -0.2186 | |
| 28 | G | A | -0.9392 | |
| 29 | G | A | -0.6042 | |
| 30 | F | A | -1.2735 | |
| 31 | F | A | 0.0000 | |
| 32 | L | A | 0.0000 | |
| 33 | R | A | -1.1591 | |
| 34 | I | A | 0.0000 | |
| 35 | H | A | -1.8087 | |
| 36 | P | A | -2.0114 | |
| 37 | D | A | -2.8411 | |
| 38 | G | A | 0.0000 | |
| 39 | R | A | -2.6847 | |
| 40 | V | A | 0.0000 | |
| 41 | D | A | -1.2037 | |
| 42 | G | A | -1.2823 | |
| 43 | V | A | -1.7875 | |
| 44 | R | A | -3.0699 | |
| 45 | E | A | -3.6155 | |
| 46 | K | A | -3.2586 | |
| 47 | S | A | -2.1343 | |
| 48 | D | A | -1.9367 | |
| 49 | P | A | -0.9204 | |
| 50 | H | A | -0.7560 | |
| 51 | I | A | 0.0000 | |
| 52 | K | A | -1.1841 | |
| 53 | L | A | 0.0000 | |
| 54 | Q | A | -1.1565 | |
| 55 | L | A | -0.7895 | |
| 56 | Q | A | -1.1742 | |
| 57 | A | A | -1.0967 | |
| 58 | E | A | -1.8662 | |
| 59 | E | A | -2.6402 | |
| 60 | R | A | -2.6853 | |
| 61 | G | A | -1.7959 | |
| 62 | V | A | 0.0000 | |
| 63 | V | A | 0.0000 | |
| 64 | S | A | 0.0000 | |
| 65 | I | A | 0.0000 | |
| 66 | K | A | -1.0365 | |
| 67 | G | A | 0.0000 | |
| 68 | V | A | -0.0790 | |
| 69 | C | A | 0.0482 | |
| 70 | A | A | -1.3912 | |
| 71 | N | A | -1.6987 | |
| 72 | R | A | -1.6040 | |
| 73 | Y | A | -0.3529 | |
| 74 | L | A | 0.0000 | |
| 75 | A | A | 0.0000 | |
| 76 | M | A | 0.0000 | |
| 77 | K | A | -2.9378 | |
| 78 | E | A | -3.5513 | |
| 79 | D | A | -3.3436 | |
| 80 | G | A | 0.0000 | |
| 81 | R | A | -2.6622 | |
| 82 | L | A | 0.0000 | |
| 83 | L | A | -1.0927 | |
| 84 | A | A | 0.0000 | |
| 85 | H | A | -1.0001 | |
| 86 | K | A | -1.5169 | |
| 87 | L | A | 0.8605 | |
| 88 | V | A | 0.7443 | |
| 89 | T | A | -0.3273 | |
| 90 | D | A | -2.3297 | |
| 91 | E | A | -1.9437 | |
| 92 | C | A | 0.0000 | |
| 93 | F | A | -1.2450 | |
| 94 | F | A | 0.0000 | |
| 95 | F | A | -1.2742 | |
| 96 | E | A | -1.1354 | |
| 97 | R | A | -1.2976 | |
| 98 | L | A | -0.1827 | |
| 99 | E | A | -1.3368 | |
| 100 | S | A | -1.3526 | |
| 101 | N | A | -1.8296 | |
| 102 | N | A | -1.7594 | |
| 103 | Y | A | -0.5591 | |
| 104 | N | A | -0.5907 | |
| 105 | T | A | 0.0000 | |
| 106 | Y | A | 0.0000 | |
| 107 | R | A | -1.2929 | |
| 108 | S | A | 0.0000 | |
| 109 | R | A | -2.5309 | |
| 110 | K | A | -3.0172 | |
| 111 | Y | A | 0.0000 | |
| 112 | T | A | -0.9148 | |
| 113 | S | A | -0.8720 | |
| 114 | W | A | -0.8959 | |
| 115 | Y | A | 0.0000 | |
| 116 | V | A | 0.0000 | |
| 117 | A | A | 0.0000 | |
| 118 | L | A | 0.0000 | |
| 119 | K | A | -1.8322 | |
| 120 | R | A | -2.2505 | |
| 121 | T | A | -1.5491 | |
| 122 | G | A | 0.0000 | |
| 123 | Q | A | -1.5305 | |
| 124 | Y | A | -1.3570 | |
| 125 | K | A | -1.4506 | |
| 126 | L | A | -1.5623 | |
| 127 | G | A | 0.0000 | |
| 128 | S | A | -1.7506 | |
| 129 | K | A | -1.7990 | |
| 130 | T | A | -1.0775 | |
| 131 | G | A | -0.7824 | |
| 132 | P | A | -0.5776 | |
| 133 | G | A | -0.6672 | |
| 134 | Q | A | -0.3258 | |
| 135 | M | A | 0.3429 | mutated: KM135A |
| 136 | A | A | 0.0000 | |
| 137 | I | A | 0.0000 | |
| 138 | L | A | 0.0000 | |
| 139 | F | A | 0.0000 | |
| 140 | L | A | 0.6196 | |
| 141 | P | A | 0.2387 | |
| 142 | M | A | -0.0527 | |
| 143 | S | A | -0.8890 | |
| 144 | A | A | 0.0000 | |
| 145 | K | A | -2.0322 | |
| 146 | S | A | -1.1199 |