Chain sequence(s) |
A: PALPEDGGSGAFPPGHFKDPKMLYCKNGGFFLRIHPDGRVDGVREKSDPHIKLQLQAEERGVVSIKGVCANRYLAMKEDGRLLAHKLVTDECFFFERLESNNYNTYRSRKYTSWYVALKRTGQYKLGSKTGPGQKAILFLPMSAKS
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Mutated residues | KV26A,KM135A |
Energy difference between WT (input) and mutated protein (by FoldX) | 1.27211 kcal/mol
CAUTION: Your mutation/s can destabilize the protein structure |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:01) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01) [INFO] runJob: Creating pdb object from: input.pdb (00:00:01) [INFO] FoldX: Starting FoldX energy minimalization (00:00:01) [INFO] FoldX: Building mutant model (00:02:23) [INFO] FoldX: Starting FoldX energy minimalization (00:02:43) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:44) [INFO] Main: Simulation completed successfully. (00:03:45) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | P | A | 0.1362 | |
2 | A | A | -0.0449 | |
3 | L | A | 0.3576 | |
4 | P | A | -1.1937 | |
5 | E | A | -2.4623 | |
6 | D | A | -2.8085 | |
7 | G | A | -1.9870 | |
8 | G | A | -1.9720 | |
9 | S | A | -0.9500 | |
10 | G | A | -1.2632 | |
11 | A | A | -0.1813 | |
12 | F | A | 0.4881 | |
13 | P | A | 0.0517 | |
14 | P | A | -0.2910 | |
15 | G | A | -0.6690 | |
16 | H | A | -0.8403 | |
17 | F | A | 0.0957 | |
18 | K | A | -1.5647 | |
19 | D | A | -1.6371 | |
20 | P | A | -1.3094 | |
21 | K | A | -0.8898 | |
22 | M | A | 0.0000 | |
23 | L | A | 0.0000 | |
24 | Y | A | 0.3612 | |
25 | C | A | 0.0000 | |
26 | V | A | 0.9388 | mutated: KV26A |
27 | N | A | -0.2186 | |
28 | G | A | -0.9392 | |
29 | G | A | -0.6042 | |
30 | F | A | -1.2735 | |
31 | F | A | 0.0000 | |
32 | L | A | 0.0000 | |
33 | R | A | -1.1591 | |
34 | I | A | 0.0000 | |
35 | H | A | -1.8087 | |
36 | P | A | -2.0114 | |
37 | D | A | -2.8411 | |
38 | G | A | 0.0000 | |
39 | R | A | -2.6847 | |
40 | V | A | 0.0000 | |
41 | D | A | -1.2037 | |
42 | G | A | -1.2823 | |
43 | V | A | -1.7875 | |
44 | R | A | -3.0699 | |
45 | E | A | -3.6155 | |
46 | K | A | -3.2586 | |
47 | S | A | -2.1343 | |
48 | D | A | -1.9367 | |
49 | P | A | -0.9204 | |
50 | H | A | -0.7560 | |
51 | I | A | 0.0000 | |
52 | K | A | -1.1841 | |
53 | L | A | 0.0000 | |
54 | Q | A | -1.1565 | |
55 | L | A | -0.7895 | |
56 | Q | A | -1.1742 | |
57 | A | A | -1.0967 | |
58 | E | A | -1.8662 | |
59 | E | A | -2.6402 | |
60 | R | A | -2.6853 | |
61 | G | A | -1.7959 | |
62 | V | A | 0.0000 | |
63 | V | A | 0.0000 | |
64 | S | A | 0.0000 | |
65 | I | A | 0.0000 | |
66 | K | A | -1.0365 | |
67 | G | A | 0.0000 | |
68 | V | A | -0.0790 | |
69 | C | A | 0.0482 | |
70 | A | A | -1.3912 | |
71 | N | A | -1.6987 | |
72 | R | A | -1.6040 | |
73 | Y | A | -0.3529 | |
74 | L | A | 0.0000 | |
75 | A | A | 0.0000 | |
76 | M | A | 0.0000 | |
77 | K | A | -2.9378 | |
78 | E | A | -3.5513 | |
79 | D | A | -3.3436 | |
80 | G | A | 0.0000 | |
81 | R | A | -2.6622 | |
82 | L | A | 0.0000 | |
83 | L | A | -1.0927 | |
84 | A | A | 0.0000 | |
85 | H | A | -1.0001 | |
86 | K | A | -1.5169 | |
87 | L | A | 0.8605 | |
88 | V | A | 0.7443 | |
89 | T | A | -0.3273 | |
90 | D | A | -2.3297 | |
91 | E | A | -1.9437 | |
92 | C | A | 0.0000 | |
93 | F | A | -1.2450 | |
94 | F | A | 0.0000 | |
95 | F | A | -1.2742 | |
96 | E | A | -1.1354 | |
97 | R | A | -1.2976 | |
98 | L | A | -0.1827 | |
99 | E | A | -1.3368 | |
100 | S | A | -1.3526 | |
101 | N | A | -1.8296 | |
102 | N | A | -1.7594 | |
103 | Y | A | -0.5591 | |
104 | N | A | -0.5907 | |
105 | T | A | 0.0000 | |
106 | Y | A | 0.0000 | |
107 | R | A | -1.2929 | |
108 | S | A | 0.0000 | |
109 | R | A | -2.5309 | |
110 | K | A | -3.0172 | |
111 | Y | A | 0.0000 | |
112 | T | A | -0.9148 | |
113 | S | A | -0.8720 | |
114 | W | A | -0.8959 | |
115 | Y | A | 0.0000 | |
116 | V | A | 0.0000 | |
117 | A | A | 0.0000 | |
118 | L | A | 0.0000 | |
119 | K | A | -1.8322 | |
120 | R | A | -2.2505 | |
121 | T | A | -1.5491 | |
122 | G | A | 0.0000 | |
123 | Q | A | -1.5305 | |
124 | Y | A | -1.3570 | |
125 | K | A | -1.4506 | |
126 | L | A | -1.5623 | |
127 | G | A | 0.0000 | |
128 | S | A | -1.7506 | |
129 | K | A | -1.7990 | |
130 | T | A | -1.0775 | |
131 | G | A | -0.7824 | |
132 | P | A | -0.5776 | |
133 | G | A | -0.6672 | |
134 | Q | A | -0.3258 | |
135 | M | A | 0.3429 | mutated: KM135A |
136 | A | A | 0.0000 | |
137 | I | A | 0.0000 | |
138 | L | A | 0.0000 | |
139 | F | A | 0.0000 | |
140 | L | A | 0.6196 | |
141 | P | A | 0.2387 | |
142 | M | A | -0.0527 | |
143 | S | A | -0.8890 | |
144 | A | A | 0.0000 | |
145 | K | A | -2.0322 | |
146 | S | A | -1.1199 |