Chain sequence(s) |
H: SEVQLVESGGGLVQPGGSLRLSCAASGFNVYYSSIHWVRQAPGKGLEWVASIYSYYGYTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARNVGYGMDYWGQGTLVTVSSASTKGPSVFPLAPAATAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTYICNVNHKPSNTKVDKKVE
L: SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYIYGLITFGQGTKVEIKRTVAAPSVFIFPPSAKSGTASVVCLLNNFYPREAKVQWAAASQESVTEQDSKDSTYSLSSTLTLYEKHKVYACEVTHQGLSSPVTK input PDB |
Selected Chain(s) | H,L |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Mutated residues | YE55H |
Energy difference between WT (input) and mutated protein (by FoldX) | 0.406178 kcal/mol |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] FoldX: Building mutant model (00:01:13) [INFO] FoldX: Starting FoldX energy minimalization (00:01:27) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:35) [INFO] Main: Simulation completed successfully. (00:02:37) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
3 | S | H | -1.1958 | |
4 | E | H | -2.0200 | |
5 | V | H | -1.0026 | |
6 | Q | H | -0.8063 | |
7 | L | H | 0.0000 | |
8 | V | H | 0.6785 | |
9 | E | H | 0.0000 | |
10 | S | H | -0.4355 | |
11 | G | H | -0.6896 | |
12 | G | H | -0.3518 | |
13 | G | H | -0.0006 | |
14 | L | H | 0.0326 | |
15 | V | H | 0.0000 | |
16 | Q | H | -1.6641 | |
17 | P | H | -1.9373 | |
18 | G | H | -1.6748 | |
19 | G | H | -1.3370 | |
20 | S | H | -1.3039 | |
21 | L | H | -1.0293 | |
22 | R | H | -1.6271 | |
23 | L | H | 0.0000 | |
24 | S | H | -0.3575 | |
25 | C | H | 0.0000 | |
26 | A | H | -0.1486 | |
27 | A | H | -0.3298 | |
28 | S | H | -0.6766 | |
29 | G | H | -1.0939 | |
30 | F | H | -0.2149 | |
31 | N | H | -0.4118 | |
32 | V | H | 0.0000 | |
33 | Y | H | 1.0753 | |
34 | Y | H | 1.7401 | |
35 | S | H | 0.0000 | |
36 | S | H | 0.3460 | |
37 | I | H | 0.0000 | |
38 | H | H | 0.0000 | |
39 | W | H | 0.0000 | |
40 | V | H | 0.0000 | |
41 | R | H | 0.0000 | |
42 | Q | H | -0.7844 | |
43 | A | H | -1.1508 | |
44 | P | H | -0.9350 | |
45 | G | H | -1.4874 | |
46 | K | H | -2.3575 | |
47 | G | H | -1.6206 | |
48 | L | H | 0.0000 | |
49 | E | H | -1.1930 | |
50 | W | H | 0.0000 | |
51 | V | H | 0.0000 | |
52 | A | H | 0.0000 | |
53 | S | H | 0.0000 | |
54 | I | H | 0.0000 | |
55 | E | H | 0.3053 | mutated: YE55H |
56 | S | H | 0.8213 | |
57 | Y | H | 1.9656 | |
58 | Y | H | 1.9135 | |
59 | G | H | 0.8648 | |
60 | Y | H | 1.3038 | |
61 | T | H | 0.4437 | |
62 | S | H | -0.0470 | |
63 | Y | H | -0.8689 | |
64 | A | H | -1.3857 | |
65 | D | H | -2.4913 | |
66 | S | H | -1.7808 | |
67 | V | H | 0.0000 | |
68 | K | H | -2.4793 | |
69 | G | H | -1.8329 | |
70 | R | H | -1.8198 | |
71 | F | H | 0.0000 | |
72 | T | H | -0.9457 | |
73 | I | H | 0.0000 | |
74 | S | H | -0.3601 | |
75 | A | H | -0.6957 | |
76 | D | H | -1.3695 | |
77 | T | H | -0.8540 | |
78 | S | H | -1.3648 | |
79 | K | H | -2.2150 | |
80 | N | H | -1.4474 | |
81 | T | H | 0.0000 | |
82 | A | H | 0.0000 | |
83 | Y | H | 0.0000 | |
84 | L | H | 0.0000 | |
85 | Q | H | -1.2770 | |
86 | M | H | 0.0000 | |
87 | N | H | -2.1618 | |
88 | S | H | -1.7136 | |
89 | L | H | 0.0000 | |
90 | R | H | -2.9868 | |
91 | A | H | -2.0426 | |
92 | E | H | -2.4741 | |
93 | D | H | 0.0000 | |
94 | T | H | -0.8138 | |
95 | A | H | 0.0000 | |
96 | V | H | 0.2383 | |
97 | Y | H | 0.0000 | |
98 | Y | H | 0.0000 | |
99 | C | H | 0.0000 | |
100 | A | H | 0.0000 | |
101 | R | H | 0.0000 | |
102 | N | H | 0.3093 | |
103 | V | H | 0.9323 | |
104 | G | H | 0.5094 | |
105 | Y | H | 1.2453 | |
106 | G | H | 0.6144 | |
107 | M | H | 0.0000 | |
108 | D | H | 0.2581 | |
109 | Y | H | 0.1660 | |
110 | W | H | -0.2247 | |
111 | G | H | 0.0000 | |
112 | Q | H | -1.3293 | |
113 | G | H | -0.6194 | |
114 | T | H | -0.0518 | |
115 | L | H | 0.3019 | |
116 | V | H | 0.0000 | |
117 | T | H | 0.0000 | |
118 | V | H | 0.0000 | |
119 | S | H | -1.0348 | |
120 | S | H | -0.6327 | |
121 | A | H | -0.4949 | |
122 | S | H | -0.6713 | |
123 | T | H | -0.9032 | |
124 | K | H | -1.6376 | |
125 | G | H | -1.6512 | |
126 | P | H | -0.7189 | |
127 | S | H | -0.2191 | |
128 | V | H | 0.0000 | |
129 | F | H | -0.1273 | |
130 | P | H | -0.5051 | |
131 | L | H | 0.0000 | |
132 | A | H | -0.6261 | |
133 | P | H | -0.2564 | |
134 | A | H | -0.1075 | |
135 | A | H | 0.0487 | |
142 | T | H | -0.2698 | |
143 | A | H | -0.1798 | |
144 | A | H | 0.0000 | |
145 | L | H | 0.0000 | |
146 | G | H | 0.0000 | |
147 | C | H | 0.0000 | |
148 | L | H | 0.0000 | |
149 | V | H | 0.0000 | |
150 | K | H | 0.0000 | |
151 | D | H | -0.4825 | |
152 | Y | H | 0.0000 | |
153 | F | H | 0.0000 | |
154 | P | H | 0.0000 | |
155 | E | H | -0.5140 | |
156 | P | H | -0.6833 | |
157 | V | H | -0.7874 | |
158 | T | H | -0.7143 | |
159 | V | H | -0.4818 | |
160 | S | H | -0.4947 | |
161 | W | H | 0.0000 | |
162 | N | H | -0.8866 | |
163 | S | H | -0.7537 | |
164 | G | H | -0.6205 | |
165 | A | H | -0.2936 | |
166 | L | H | -0.0015 | |
167 | T | H | -0.1961 | |
168 | S | H | -0.1960 | |
169 | G | H | -0.3324 | |
170 | V | H | 0.1319 | |
171 | H | H | -0.4057 | |
172 | T | H | -0.2055 | |
173 | F | H | 0.0000 | |
174 | P | H | -0.3811 | |
175 | A | H | 0.1558 | |
176 | V | H | 0.3354 | |
177 | L | H | 0.9083 | |
178 | Q | H | 0.1573 | |
179 | S | H | -0.1069 | |
180 | S | H | -0.2452 | |
181 | G | H | -0.0147 | |
182 | L | H | -0.0058 | |
183 | Y | H | 0.2749 | |
184 | S | H | 0.0000 | |
185 | L | H | 0.0000 | |
186 | S | H | 0.0000 | |
187 | S | H | 0.0000 | |
188 | V | H | 0.0000 | |
189 | V | H | 0.0000 | |
190 | T | H | -0.1971 | |
191 | V | H | 0.0000 | |
192 | P | H | -0.2855 | |
193 | S | H | -0.2123 | |
194 | S | H | -0.0874 | |
195 | S | H | 0.2765 | |
196 | L | H | 0.8603 | |
197 | G | H | 0.0213 | |
200 | T | H | -0.3978 | |
201 | Y | H | -0.4487 | |
202 | I | H | -1.0465 | |
203 | C | H | 0.0000 | |
204 | N | H | -1.6700 | |
205 | V | H | 0.0000 | |
206 | N | H | -2.3218 | |
207 | H | H | 0.0000 | |
208 | K | H | -2.8545 | |
209 | P | H | -1.6618 | |
210 | S | H | -2.0030 | |
211 | N | H | -2.7104 | |
212 | T | H | -2.2537 | |
213 | K | H | -2.8865 | |
214 | V | H | -1.7618 | |
215 | D | H | -2.6865 | |
216 | K | H | -2.2388 | |
217 | K | H | -2.2317 | |
218 | V | H | 0.0000 | |
219 | E | H | -1.9136 | |
1 | S | L | -1.3716 | |
2 | D | L | -2.2012 | |
3 | I | L | -1.1164 | |
4 | Q | L | -2.1190 | |
5 | M | L | 0.0000 | |
6 | T | L | -1.3960 | |
7 | Q | L | 0.0000 | |
8 | S | L | -0.9222 | |
9 | P | L | -0.6282 | |
10 | S | L | -0.9594 | |
11 | S | L | -0.9074 | |
12 | L | L | -0.5213 | |
13 | S | L | -0.8938 | |
14 | A | L | 0.0000 | |
15 | S | L | -0.6025 | |
16 | V | L | 0.2107 | |
17 | G | L | -0.7294 | |
18 | D | L | -1.4716 | |
19 | R | L | -2.2013 | |
20 | V | L | 0.0000 | |
21 | T | L | -0.5866 | |
22 | I | L | 0.0000 | |
23 | T | L | -0.8323 | |
24 | C | L | 0.0000 | |
25 | R | L | -2.4950 | |
26 | A | L | 0.0000 | |
27 | S | L | -1.2471 | |
28 | Q | L | -0.5793 | |
29 | S | L | 0.1376 | |
30 | V | L | 1.6701 | |
31 | S | L | 0.0000 | |
32 | S | L | 0.1829 | |
33 | A | L | 0.4548 | |
34 | V | L | 0.0000 | |
35 | A | L | 0.0000 | |
36 | W | L | 0.0000 | |
37 | Y | L | 0.0000 | |
38 | Q | L | 0.0000 | |
39 | Q | L | 0.0000 | |
40 | K | L | -1.6816 | |
41 | P | L | -1.5743 | |
42 | G | L | -1.6490 | |
43 | K | L | -2.5188 | |
44 | A | L | -1.4631 | |
45 | P | L | 0.0000 | |
46 | K | L | -0.9877 | |
47 | L | L | 0.0000 | |
48 | L | L | 0.0000 | |
49 | I | L | 0.0000 | |
50 | Y | L | 0.5202 | |
51 | S | L | 0.1376 | |
52 | A | L | 0.0000 | |
53 | S | L | -0.3192 | |
54 | S | L | 0.3146 | |
55 | L | L | 0.6026 | |
56 | Y | L | 0.4549 | |
57 | S | L | -0.0145 | |
58 | G | L | -0.3862 | |
59 | V | L | -0.1551 | |
60 | P | L | -0.3315 | |
61 | S | L | -0.4030 | |
62 | R | L | -0.7779 | |
63 | F | L | 0.0000 | |
64 | S | L | -0.2468 | |
65 | G | L | -0.3701 | |
66 | S | L | -0.8751 | |
67 | R | L | -1.4972 | |
68 | S | L | -1.2196 | |
69 | G | L | -1.0573 | |
70 | T | L | -1.1534 | |
71 | D | L | -1.6997 | |
72 | F | L | 0.0000 | |
73 | T | L | -0.7853 | |
74 | L | L | 0.0000 | |
75 | T | L | -0.6054 | |
76 | I | L | 0.0000 | |
77 | S | L | -1.3059 | |
78 | S | L | -1.1295 | |
79 | L | L | 0.0000 | |
80 | Q | L | -0.9619 | |
81 | P | L | -1.1953 | |
82 | E | L | -1.9288 | |
83 | D | L | 0.0000 | |
84 | F | L | -0.6778 | |
85 | A | L | 0.0000 | |
86 | T | L | -1.0128 | |
87 | Y | L | 0.0000 | |
88 | Y | L | 0.0000 | |
89 | C | L | 0.0000 | |
90 | Q | L | 0.0000 | |
91 | Q | L | 0.0000 | |
92 | Y | L | 1.2276 | |
93 | I | L | 0.0000 | |
94 | Y | L | 1.7373 | |
95 | G | L | 0.9629 | |
96 | L | L | 0.9584 | |
97 | I | L | 0.0000 | |
98 | T | L | -0.2856 | |
99 | F | L | 0.0000 | |
100 | G | L | 0.0000 | |
101 | Q | L | -1.8538 | |
102 | G | L | 0.0000 | |
103 | T | L | 0.0000 | |
104 | K | L | -1.8747 | |
105 | V | L | 0.0000 | |
106 | E | L | -1.3317 | |
107 | I | L | -0.6858 | |
108 | K | L | -1.6070 | |
109 | R | L | -1.2987 | |
110 | T | L | -0.1657 | |
111 | V | L | 0.3990 | |
112 | A | L | 0.1809 | |
113 | A | L | -0.1228 | |
114 | P | L | 0.0000 | |
115 | S | L | -0.2232 | |
116 | V | L | 0.0000 | |
117 | F | L | -0.0335 | |
118 | I | L | 0.0504 | |
119 | F | L | 0.0000 | |
120 | P | L | -0.2420 | |
121 | P | L | -0.4484 | |
122 | S | L | -0.5420 | |
126 | A | L | -0.8870 | |
127 | K | L | -1.9207 | |
128 | S | L | -1.2779 | |
129 | G | L | -0.8833 | |
130 | T | L | -0.3456 | |
131 | A | L | -0.1176 | |
132 | S | L | 0.1498 | |
133 | V | L | 0.0000 | |
134 | V | L | 0.0000 | |
135 | C | L | 0.0000 | |
136 | L | L | 0.0000 | |
137 | L | L | 0.0000 | |
138 | N | L | -0.4450 | |
139 | N | L | -1.0488 | |
140 | F | L | 0.0000 | |
141 | Y | L | -1.1285 | |
142 | P | L | -1.7412 | |
143 | R | L | -3.0957 | |
144 | E | L | -3.2163 | |
145 | A | L | -2.2495 | |
146 | K | L | -2.3019 | |
147 | V | L | -1.3404 | |
148 | Q | L | -1.3296 | |
149 | W | L | -0.3773 | |
157 | A | L | -0.0289 | |
158 | A | L | 0.0390 | |
159 | A | L | 0.2710 | |
160 | S | L | -0.5544 | |
161 | Q | L | -1.2608 | |
162 | E | L | -1.9519 | |
163 | S | L | -0.8503 | |
164 | V | L | -0.8457 | |
165 | T | L | -1.2327 | |
166 | E | L | -2.3358 | |
167 | Q | L | -1.9310 | |
168 | D | L | -1.9541 | |
169 | S | L | -1.8998 | |
170 | K | L | -2.2526 | |
171 | D | L | -1.7298 | |
172 | S | L | 0.0000 | |
173 | T | L | 0.0000 | |
174 | Y | L | 0.0000 | |
175 | S | L | 0.0000 | |
176 | L | L | 0.0000 | |
177 | S | L | 0.0000 | |
178 | S | L | 0.0000 | |
179 | T | L | -0.3420 | |
180 | L | L | 0.0560 | |
181 | T | L | 0.6670 | |
182 | L | L | 1.4655 | |
187 | Y | L | -0.2753 | |
188 | E | L | -2.4362 | |
189 | K | L | -3.0490 | |
190 | H | L | -2.7077 | |
191 | K | L | -2.5176 | |
192 | V | L | -1.4757 | |
193 | Y | L | -1.3081 | |
194 | A | L | -0.8114 | |
195 | C | L | 0.0000 | |
196 | E | L | -1.1640 | |
197 | V | L | 0.0000 | |
198 | T | L | -1.2231 | |
199 | H | L | 0.0000 | |
200 | Q | L | -1.5297 | |
201 | G | L | -0.3788 | |
202 | L | L | -0.2519 | |
203 | S | L | -0.4807 | |
204 | S | L | -0.4408 | |
205 | P | L | -0.6234 | |
206 | V | L | -0.2171 | |
207 | T | L | -0.8959 | |
208 | K | L | -1.4476 |