| Chain sequence(s) |
A: MLGPLPLNPEPEIRSTSEYVTPTDLYCYAETDLITEEGNPTKDIVVNGKVEKPKVSAYDWKVFKLTLPDPNTFPLPSEDFVDFSTEILIWQLEAFYIKVFGPLGKGTYGHANFNKLGDVDNPTSPLHETANDNVNYSWEPVRRQEYIIGCEPPVGVYTDIAKPCPGLPPGACPPLEKKSSVIEHGDRCDIGFGAKNFAKLLPEKNDVPDIILNTSCKVPDYDGMRADPYGDRMFTHDRYEQSRNVKNLVRSGPEKHPLPSGPPPSPLYVPPPPGSPYAVLPSTDYFTIPDRGEITEEDLLFNKPIFLEKTEGKNNGICWHNTLYITIVDNTRAEIKTTKTKKATPTENVYNASYYETSKTYTRQYQIELIVRLCRIPLTPETLEYLRRRDPSILVDAKLPDIPPVERPDPYAGKKFKELDLTNKLSTDLSSSSLGRLYLNR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 1.6228 | |
| 2 | L | A | 2.0355 | |
| 3 | G | A | 0.8010 | |
| 4 | P | A | 0.9448 | |
| 5 | L | A | 1.6857 | |
| 6 | P | A | 0.6972 | |
| 7 | L | A | 0.8580 | |
| 8 | N | A | -1.0344 | |
| 9 | P | A | -1.7833 | |
| 10 | E | A | -2.5685 | |
| 11 | P | A | -2.4092 | |
| 12 | E | A | -2.4023 | |
| 13 | I | A | -1.1488 | |
| 14 | R | A | -1.4912 | |
| 15 | S | A | -1.4275 | |
| 16 | T | A | 0.0000 | |
| 17 | S | A | -1.4315 | |
| 18 | E | A | -2.1657 | |
| 19 | Y | A | 0.0000 | |
| 20 | V | A | 0.0000 | |
| 21 | T | A | -0.6554 | |
| 22 | P | A | -0.7723 | |
| 23 | T | A | 0.0000 | |
| 24 | D | A | -1.7064 | |
| 25 | L | A | -0.6451 | |
| 26 | Y | A | -0.4084 | |
| 27 | C | A | 0.0000 | |
| 28 | Y | A | -0.3668 | |
| 29 | A | A | 0.0000 | |
| 30 | E | A | -0.9727 | |
| 31 | T | A | 0.0000 | |
| 32 | D | A | -1.6286 | |
| 33 | L | A | 0.1301 | |
| 34 | I | A | 0.0000 | |
| 35 | T | A | -0.5083 | |
| 36 | E | A | 0.0000 | |
| 37 | E | A | -2.1727 | |
| 38 | G | A | 0.0000 | |
| 39 | N | A | -2.4093 | |
| 40 | P | A | 0.0000 | |
| 41 | T | A | -1.6225 | |
| 42 | K | A | -2.5144 | |
| 43 | D | A | -1.8920 | |
| 44 | I | A | -0.2676 | |
| 45 | V | A | 0.9132 | |
| 46 | V | A | 0.5220 | |
| 47 | N | A | -1.0132 | |
| 48 | G | A | -0.8203 | |
| 49 | K | A | -1.2185 | |
| 50 | V | A | 0.1935 | |
| 51 | E | A | -1.4107 | |
| 52 | K | A | -1.8490 | |
| 53 | P | A | -1.8468 | |
| 54 | K | A | -2.2343 | |
| 55 | V | A | 0.0000 | |
| 56 | S | A | 0.0000 | |
| 57 | A | A | 0.0000 | |
| 58 | Y | A | 0.0000 | |
| 59 | D | A | 0.0000 | |
| 60 | W | A | 0.0000 | |
| 61 | K | A | 0.0000 | |
| 62 | V | A | 0.0000 | |
| 63 | F | A | 0.0000 | |
| 64 | K | A | -1.5499 | |
| 65 | L | A | 0.0000 | |
| 66 | T | A | -1.2890 | |
| 67 | L | A | 0.0000 | |
| 68 | P | A | 0.0000 | |
| 69 | D | A | -0.5241 | |
| 70 | P | A | 0.0000 | |
| 71 | N | A | -0.4834 | |
| 72 | T | A | -0.3412 | |
| 73 | F | A | 0.0026 | |
| 74 | P | A | -0.3041 | |
| 75 | L | A | -0.4836 | |
| 76 | P | A | -0.7573 | |
| 77 | S | A | -1.5857 | |
| 78 | E | A | -2.9315 | |
| 79 | D | A | -2.8391 | |
| 80 | F | A | -1.5050 | |
| 81 | V | A | 0.0000 | |
| 82 | D | A | -1.9117 | |
| 83 | F | A | -0.0707 | |
| 84 | S | A | -0.2866 | |
| 85 | T | A | -0.4371 | |
| 86 | E | A | -0.5745 | |
| 87 | I | A | 0.0000 | |
| 88 | L | A | 0.0000 | |
| 89 | I | A | 0.0000 | |
| 90 | W | A | 0.0000 | |
| 91 | Q | A | -0.3605 | |
| 92 | L | A | 0.0000 | |
| 93 | E | A | -0.6393 | |
| 94 | A | A | 0.0000 | |
| 95 | F | A | 0.0000 | |
| 96 | Y | A | -0.2815 | |
| 97 | I | A | 0.0000 | |
| 98 | K | A | -0.4381 | |
| 99 | V | A | 0.0000 | |
| 100 | F | A | 0.4117 | |
| 101 | G | A | -0.2887 | |
| 102 | P | A | -0.3921 | |
| 103 | L | A | -0.3833 | |
| 104 | G | A | -1.1213 | |
| 105 | K | A | -2.1940 | |
| 106 | G | A | 0.0000 | |
| 107 | T | A | -0.7688 | |
| 108 | Y | A | 0.0000 | |
| 109 | G | A | -0.8366 | |
| 110 | H | A | -1.1169 | |
| 111 | A | A | -1.0182 | |
| 112 | N | A | -1.6445 | |
| 113 | F | A | 0.0000 | |
| 114 | N | A | 0.0000 | |
| 115 | K | A | -0.5667 | |
| 116 | L | A | -0.6192 | |
| 117 | G | A | 0.0000 | |
| 118 | D | A | -1.0553 | |
| 119 | V | A | -0.7724 | |
| 120 | D | A | -1.9225 | |
| 121 | N | A | -2.0978 | |
| 122 | P | A | -1.1737 | |
| 123 | T | A | -0.7437 | |
| 124 | S | A | -0.4563 | |
| 125 | P | A | 0.2591 | |
| 126 | L | A | -0.0366 | |
| 127 | H | A | -0.8354 | |
| 128 | E | A | -1.4557 | |
| 129 | T | A | -1.2541 | |
| 130 | A | A | -0.9264 | |
| 131 | N | A | -1.6758 | |
| 132 | D | A | -1.3421 | |
| 133 | N | A | -1.0982 | |
| 134 | V | A | -0.6206 | |
| 135 | N | A | -1.2685 | |
| 136 | Y | A | -0.6009 | |
| 137 | S | A | -0.5300 | |
| 138 | W | A | 0.0000 | |
| 139 | E | A | -0.6361 | |
| 140 | P | A | 0.0000 | |
| 141 | V | A | 0.0000 | |
| 142 | R | A | 0.0000 | |
| 143 | R | A | 0.0000 | |
| 144 | Q | A | 0.0000 | |
| 145 | E | A | 0.0000 | |
| 146 | Y | A | 0.0000 | |
| 147 | I | A | 0.0000 | |
| 148 | I | A | 0.0000 | |
| 149 | G | A | 0.0000 | |
| 150 | C | A | 0.0000 | |
| 151 | E | A | -0.6301 | |
| 152 | P | A | 0.0000 | |
| 153 | P | A | 0.0000 | |
| 154 | V | A | 0.0745 | |
| 155 | G | A | 0.0000 | |
| 156 | V | A | 0.0000 | |
| 157 | Y | A | -1.0283 | |
| 158 | T | A | -0.8420 | |
| 159 | D | A | 0.0000 | |
| 160 | I | A | -0.1434 | |
| 161 | A | A | -0.5669 | |
| 162 | K | A | -1.3931 | |
| 163 | P | A | -0.2399 | |
| 164 | C | A | 0.2115 | |
| 165 | P | A | -0.1366 | |
| 166 | G | A | -0.0511 | |
| 167 | L | A | 0.6302 | |
| 168 | P | A | -0.1012 | |
| 169 | P | A | -0.3396 | |
| 170 | G | A | -0.5480 | |
| 171 | A | A | -0.0783 | |
| 172 | C | A | 0.6470 | |
| 173 | P | A | 0.5304 | |
| 174 | P | A | 0.6339 | |
| 175 | L | A | 0.7992 | |
| 176 | E | A | -0.9896 | |
| 177 | K | A | -2.0764 | |
| 178 | K | A | -1.7012 | |
| 179 | S | A | -0.9646 | |
| 180 | S | A | -0.1670 | |
| 181 | V | A | -0.2801 | |
| 182 | I | A | 0.0000 | |
| 183 | E | A | -1.2694 | |
| 184 | H | A | -1.4558 | |
| 185 | G | A | -0.9206 | |
| 186 | D | A | -0.7120 | |
| 187 | R | A | 0.0000 | |
| 188 | C | A | 0.0000 | |
| 189 | D | A | -0.2628 | |
| 190 | I | A | 0.0000 | |
| 191 | G | A | -0.6605 | |
| 192 | F | A | -0.0923 | |
| 193 | G | A | -0.2782 | |
| 194 | A | A | -0.5022 | |
| 195 | K | A | -1.1156 | |
| 196 | N | A | 0.0000 | |
| 197 | F | A | 0.0000 | |
| 198 | A | A | -1.6778 | |
| 199 | K | A | -1.9800 | |
| 200 | L | A | -0.7326 | |
| 201 | L | A | -1.3142 | |
| 202 | P | A | -1.6173 | |
| 203 | E | A | -2.0057 | |
| 204 | K | A | -2.4098 | |
| 205 | N | A | -1.5438 | |
| 206 | D | A | -1.0606 | |
| 207 | V | A | 0.0000 | |
| 208 | P | A | 0.0000 | |
| 209 | D | A | -1.5846 | |
| 210 | I | A | 0.0000 | |
| 211 | I | A | 0.0000 | |
| 212 | L | A | -1.1502 | |
| 213 | N | A | -1.6404 | |
| 214 | T | A | -1.0009 | |
| 215 | S | A | -0.7618 | |
| 216 | C | A | 0.0000 | |
| 217 | K | A | 0.0000 | |
| 218 | V | A | 0.1872 | |
| 219 | P | A | 0.0000 | |
| 220 | D | A | -0.9659 | |
| 221 | Y | A | -1.4815 | |
| 222 | D | A | -2.6151 | |
| 223 | G | A | -1.8791 | |
| 224 | M | A | 0.0000 | |
| 225 | R | A | -3.1138 | |
| 226 | A | A | -1.6309 | |
| 227 | D | A | -1.3807 | |
| 228 | P | A | -0.8605 | |
| 229 | Y | A | -0.6673 | |
| 230 | G | A | 0.0000 | |
| 231 | D | A | 0.0000 | |
| 232 | R | A | -0.8049 | |
| 233 | M | A | 0.0000 | |
| 234 | F | A | 0.0000 | |
| 235 | T | A | -0.9941 | |
| 236 | H | A | -1.1144 | |
| 237 | D | A | -1.5395 | |
| 238 | R | A | -1.8349 | |
| 239 | Y | A | -0.9949 | |
| 240 | E | A | -1.1815 | |
| 241 | Q | A | -1.6155 | |
| 242 | S | A | -1.9862 | |
| 243 | R | A | -2.7069 | |
| 244 | N | A | -1.8392 | |
| 245 | V | A | -0.6020 | |
| 246 | K | A | -1.3905 | |
| 247 | N | A | -0.9311 | |
| 248 | L | A | 0.0000 | |
| 249 | V | A | 0.0000 | |
| 250 | R | A | 0.0000 | |
| 251 | S | A | -1.0816 | |
| 252 | G | A | -1.2425 | |
| 253 | P | A | -1.4962 | |
| 254 | E | A | -2.1131 | |
| 255 | K | A | -2.4542 | |
| 256 | H | A | -2.0402 | |
| 257 | P | A | -1.3119 | |
| 258 | L | A | 0.2074 | |
| 259 | P | A | -0.0125 | |
| 260 | S | A | 0.1218 | |
| 261 | G | A | -0.2655 | |
| 262 | P | A | -0.3470 | |
| 263 | P | A | -0.0168 | |
| 264 | P | A | 0.0853 | |
| 265 | S | A | 0.5634 | |
| 266 | P | A | 0.7458 | |
| 267 | L | A | 1.8746 | |
| 268 | Y | A | 1.7201 | |
| 269 | V | A | 1.9098 | |
| 270 | P | A | 1.1572 | |
| 271 | P | A | 0.7501 | |
| 272 | P | A | -0.1540 | |
| 273 | P | A | -0.3044 | |
| 274 | G | A | -0.3140 | |
| 275 | S | A | 0.1818 | |
| 276 | P | A | 0.4809 | |
| 277 | Y | A | 1.6607 | |
| 278 | A | A | 1.3695 | |
| 279 | V | A | 2.1140 | |
| 280 | L | A | 1.6179 | |
| 281 | P | A | 0.2152 | |
| 282 | S | A | 0.0000 | |
| 283 | T | A | -0.4804 | |
| 284 | D | A | -1.1107 | |
| 285 | Y | A | 0.5438 | |
| 286 | F | A | 0.2247 | |
| 287 | T | A | -0.4686 | |
| 288 | I | A | 0.0000 | |
| 289 | P | A | 0.0000 | |
| 290 | D | A | -1.5338 | |
| 291 | R | A | 0.0000 | |
| 292 | G | A | -1.6661 | |
| 293 | E | A | -2.2911 | |
| 294 | I | A | -1.6299 | |
| 295 | T | A | -1.9328 | |
| 296 | E | A | -2.7352 | |
| 297 | E | A | -2.9237 | |
| 298 | D | A | -2.0695 | |
| 299 | L | A | -1.2862 | |
| 300 | L | A | -1.0686 | |
| 301 | F | A | 0.0000 | |
| 302 | N | A | -0.8957 | |
| 303 | K | A | -1.2005 | |
| 304 | P | A | -0.2217 | |
| 305 | I | A | 0.1204 | |
| 306 | F | A | -0.2602 | |
| 307 | L | A | 0.0000 | |
| 308 | E | A | -2.5683 | |
| 309 | K | A | -3.1135 | |
| 310 | T | A | 0.0000 | |
| 311 | E | A | -2.6375 | |
| 312 | G | A | -2.0975 | |
| 313 | K | A | -1.9009 | |
| 314 | N | A | 0.0000 | |
| 315 | N | A | -1.5504 | |
| 316 | G | A | 0.0000 | |
| 317 | I | A | 0.0000 | |
| 318 | C | A | 0.0000 | |
| 319 | W | A | 0.0000 | |
| 320 | H | A | -0.4783 | |
| 321 | N | A | -0.4549 | |
| 322 | T | A | -0.5140 | |
| 323 | L | A | 0.0000 | |
| 324 | Y | A | 0.0000 | |
| 325 | I | A | 0.0000 | |
| 326 | T | A | 0.0000 | |
| 327 | I | A | 0.0000 | |
| 328 | V | A | 0.0000 | |
| 329 | D | A | 0.0000 | |
| 330 | N | A | 0.0000 | |
| 331 | T | A | 0.0000 | |
| 332 | R | A | 0.0000 | |
| 333 | A | A | 0.0000 | |
| 334 | E | A | -2.1528 | |
| 335 | I | A | -1.8104 | |
| 336 | K | A | -2.3654 | |
| 337 | T | A | -1.9497 | |
| 338 | T | A | -1.9353 | |
| 339 | K | A | -2.9965 | |
| 340 | T | A | -2.5930 | |
| 341 | K | A | -3.1428 | |
| 342 | K | A | -2.9045 | |
| 343 | A | A | -1.2608 | |
| 344 | T | A | -0.9725 | |
| 345 | P | A | -0.9677 | |
| 346 | T | A | -0.9949 | |
| 347 | E | A | -1.7701 | |
| 348 | N | A | -1.1019 | |
| 349 | V | A | 0.9953 | |
| 350 | Y | A | 1.3362 | |
| 351 | N | A | 0.1447 | |
| 352 | A | A | -0.2885 | |
| 353 | S | A | -0.7309 | |
| 354 | Y | A | -1.1800 | |
| 355 | Y | A | -2.0302 | |
| 356 | E | A | -2.8292 | |
| 357 | T | A | -2.0579 | |
| 358 | S | A | -1.8879 | |
| 359 | K | A | -2.1914 | |
| 360 | T | A | -2.0518 | |
| 361 | Y | A | 0.0000 | |
| 362 | T | A | -1.2806 | |
| 363 | R | A | 0.0000 | |
| 364 | Q | A | -0.2695 | |
| 365 | Y | A | 0.0000 | |
| 366 | Q | A | -0.4028 | |
| 367 | I | A | 0.0000 | |
| 368 | E | A | 0.0000 | |
| 369 | L | A | 0.0000 | |
| 370 | I | A | 0.0000 | |
| 371 | V | A | 0.0000 | |
| 372 | R | A | -0.5471 | |
| 373 | L | A | 0.0000 | |
| 374 | C | A | 0.0000 | |
| 375 | R | A | -0.6489 | |
| 376 | I | A | 0.0000 | |
| 377 | P | A | -0.5427 | |
| 378 | L | A | -0.4292 | |
| 379 | T | A | -0.9362 | |
| 380 | P | A | -1.4843 | |
| 381 | E | A | -2.5233 | |
| 382 | T | A | 0.0000 | |
| 383 | L | A | -1.8140 | |
| 384 | E | A | -3.0387 | |
| 385 | Y | A | 0.0000 | |
| 386 | L | A | 0.0000 | |
| 387 | R | A | -3.0118 | |
| 388 | R | A | -2.8462 | |
| 389 | R | A | -1.7522 | |
| 390 | D | A | -1.4383 | |
| 391 | P | A | -1.6673 | |
| 392 | S | A | -1.0893 | |
| 393 | I | A | 0.0000 | |
| 394 | L | A | 0.0000 | |
| 395 | V | A | -0.9887 | |
| 396 | D | A | -1.0142 | |
| 397 | A | A | 0.0000 | |
| 398 | K | A | -2.0721 | |
| 399 | L | A | -1.1904 | |
| 400 | P | A | -1.4084 | |
| 401 | D | A | -1.9951 | |
| 402 | I | A | -0.8377 | |
| 403 | P | A | -0.5968 | |
| 404 | P | A | -0.5532 | |
| 405 | V | A | 0.4350 | |
| 406 | E | A | -1.6897 | |
| 407 | R | A | -1.9030 | |
| 408 | P | A | -1.4827 | |
| 409 | D | A | -1.6821 | |
| 410 | P | A | -1.0207 | |
| 411 | Y | A | -0.9437 | |
| 412 | A | A | -1.0630 | |
| 413 | G | A | -1.4085 | |
| 414 | K | A | -2.0683 | |
| 415 | K | A | -2.7392 | |
| 416 | F | A | -1.9429 | |
| 417 | K | A | -2.1352 | |
| 418 | E | A | -2.7741 | |
| 419 | L | A | -2.0620 | |
| 420 | D | A | -2.7793 | |
| 421 | L | A | 0.0000 | |
| 422 | T | A | -1.3528 | |
| 423 | N | A | -1.8249 | |
| 424 | K | A | -1.6962 | |
| 425 | L | A | -0.6896 | |
| 426 | S | A | -0.8119 | |
| 427 | T | A | -0.7414 | |
| 428 | D | A | -1.8315 | |
| 429 | L | A | 0.0000 | |
| 430 | S | A | -1.1627 | |
| 431 | S | A | -1.1349 | |
| 432 | S | A | 0.0000 | |
| 433 | S | A | -0.5225 | |
| 434 | L | A | 0.0000 | |
| 435 | G | A | 0.0000 | |
| 436 | R | A | -1.7198 | |
| 437 | L | A | -0.3724 | |
| 438 | Y | A | -0.2014 | |
| 439 | L | A | 0.0022 | |
| 440 | N | A | -1.5886 | |
| 441 | R | A | -1.8997 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine