| Chain sequence(s) |
H: QLQLQESGPGLVKPSETLTLTCTVSADSISSTTYYWVWIRQPPGKGLEWIGSISYSGSTYYNPSLKSRVTVSVDTSKNQFSLKLNSVAATDTALYYCARHLGYNGRYLPFDYWGQGTLVTVSS
L: QSALTQPASVSGSPGQSITISCTGTSSDVGFYNYVSWYQQHPGKAPELMIYDVSNRPSGVSDRFSGSKSGNTASLTISGLQAEDEADYYCSSYTSISTWVFGGGTKLTVL input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:46)
[INFO] Main: Simulation completed successfully. (00:00:47)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.5278 | |
| 2 | L | H | 0.0000 | |
| 3 | Q | H | -1.8411 | |
| 4 | L | H | 0.0000 | |
| 5 | Q | H | -1.5408 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.5578 | |
| 8 | G | H | -0.4199 | |
| 9 | P | H | -0.0472 | |
| 11 | G | H | 0.3396 | |
| 12 | L | H | 0.9293 | |
| 13 | V | H | 0.0000 | |
| 14 | K | H | -1.2258 | |
| 15 | P | H | -1.2463 | |
| 16 | S | H | -1.3693 | |
| 17 | E | H | -2.0082 | |
| 18 | T | H | -1.5141 | |
| 19 | L | H | 0.0000 | |
| 20 | T | H | -0.8453 | |
| 21 | L | H | 0.0000 | |
| 22 | T | H | -0.5302 | |
| 23 | C | H | 0.0000 | |
| 24 | T | H | -1.1046 | |
| 25 | V | H | 0.0000 | |
| 26 | S | H | -1.1331 | |
| 27 | A | H | -0.6196 | |
| 28 | D | H | -0.7008 | |
| 29 | S | H | -0.4557 | |
| 30 | I | H | 0.0000 | |
| 31 | S | H | -0.1214 | |
| 34 | S | H | 0.0150 | |
| 35 | T | H | 0.2930 | |
| 36 | T | H | 0.4877 | |
| 37 | Y | H | 0.8010 | |
| 38 | Y | H | 0.6533 | |
| 39 | W | H | 0.0000 | |
| 40 | V | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | I | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.5905 | |
| 45 | P | H | -0.7542 | |
| 46 | P | H | -0.8714 | |
| 47 | G | H | -1.4581 | |
| 48 | K | H | -2.2974 | |
| 49 | G | H | -1.4402 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.7869 | |
| 52 | W | H | 0.0000 | |
| 53 | I | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | S | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | S | H | 0.0000 | |
| 58 | Y | H | 0.3998 | |
| 59 | S | H | -0.0705 | |
| 63 | G | H | -0.2992 | |
| 64 | S | H | -0.0852 | |
| 65 | T | H | 0.2318 | |
| 66 | Y | H | 0.5465 | |
| 67 | Y | H | -0.1731 | |
| 68 | N | H | 0.0000 | |
| 69 | P | H | -0.6297 | |
| 70 | S | H | -0.9864 | |
| 71 | L | H | 0.0000 | |
| 72 | K | H | -1.8401 | |
| 74 | S | H | -1.3208 | |
| 75 | R | H | -1.4585 | |
| 76 | V | H | 0.0000 | |
| 77 | T | H | -0.8507 | |
| 78 | V | H | 0.0000 | |
| 79 | S | H | -0.3877 | |
| 80 | V | H | -0.4421 | |
| 81 | D | H | -1.2632 | |
| 82 | T | H | -1.0721 | |
| 83 | S | H | -1.3379 | |
| 84 | K | H | -2.2007 | |
| 85 | N | H | -1.5054 | |
| 86 | Q | H | -1.2892 | |
| 87 | F | H | 0.0000 | |
| 88 | S | H | -0.4857 | |
| 89 | L | H | 0.0000 | |
| 90 | K | H | -1.2978 | |
| 91 | L | H | 0.0000 | |
| 92 | N | H | -1.5302 | |
| 93 | S | H | -1.3611 | |
| 94 | V | H | 0.0000 | |
| 95 | A | H | -0.5534 | |
| 96 | A | H | -0.1886 | |
| 97 | T | H | -0.0866 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | 0.2748 | |
| 100 | A | H | 0.0000 | |
| 101 | L | H | 0.5473 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | R | H | 0.0000 | |
| 107 | H | H | 0.0000 | |
| 108 | L | H | 0.8065 | |
| 109 | G | H | 0.0000 | |
| 110 | Y | H | 0.7166 | |
| 111 | N | H | -0.9309 | |
| 111A | G | H | -0.9593 | |
| 112A | R | H | -0.9603 | |
| 112 | Y | H | 0.3103 | |
| 113 | L | H | 0.7139 | |
| 114 | P | H | 0.0000 | |
| 115 | F | H | 0.0000 | |
| 116 | D | H | -0.2597 | |
| 117 | Y | H | -0.3895 | |
| 118 | W | H | -0.8886 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.7497 | |
| 121 | G | H | 0.0000 | |
| 122 | T | H | 0.0217 | |
| 123 | L | H | 1.0196 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.4369 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.2700 | |
| 128 | S | H | -0.4380 | |
| 1 | Q | L | -0.8436 | |
| 2 | S | L | -0.6978 | |
| 3 | A | L | -0.5012 | |
| 4 | L | L | 0.0000 | |
| 5 | T | L | -0.3423 | |
| 6 | Q | L | -0.4920 | |
| 7 | P | L | -0.3666 | |
| 8 | A | L | -0.4399 | |
| 9 | S | L | -0.5458 | |
| 11 | V | L | -0.0433 | |
| 12 | S | L | 0.0047 | |
| 13 | G | L | 0.0000 | |
| 14 | S | L | -0.0099 | |
| 15 | P | L | -0.7102 | |
| 16 | G | L | -1.3733 | |
| 17 | Q | L | -1.4663 | |
| 18 | S | L | -0.9572 | |
| 19 | I | L | -0.2433 | |
| 20 | T | L | -0.0686 | |
| 21 | I | L | 0.0000 | |
| 22 | S | L | -0.2609 | |
| 23 | C | L | 0.0000 | |
| 24 | T | L | -0.4632 | |
| 25 | G | L | -0.2695 | |
| 26 | T | L | -0.1973 | |
| 27 | S | L | 0.0698 | |
| 28 | S | L | 0.5740 | |
| 29 | D | L | 0.0000 | |
| 30 | V | L | 0.0000 | |
| 31 | G | L | 0.1094 | |
| 35 | F | L | 1.5570 | |
| 36 | Y | L | 0.4474 | |
| 37 | N | L | -0.3399 | |
| 38 | Y | L | 0.2207 | |
| 39 | V | L | 0.0000 | |
| 40 | S | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | -1.3804 | |
| 44 | Q | L | 0.0000 | |
| 45 | H | L | -2.0343 | |
| 46 | P | L | -1.3281 | |
| 47 | G | L | -1.5931 | |
| 48 | K | L | -2.5523 | |
| 49 | A | L | -1.6884 | |
| 50 | P | L | 0.0000 | |
| 51 | E | L | -2.1064 | |
| 52 | L | L | 0.0000 | |
| 53 | M | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | -0.1231 | |
| 56 | D | L | 0.0000 | |
| 57 | V | L | 0.0000 | |
| 65 | S | L | -0.8044 | |
| 66 | N | L | -0.8791 | |
| 67 | R | L | -1.4229 | |
| 68 | P | L | -0.6786 | |
| 69 | S | L | -0.6330 | |
| 70 | G | L | -0.8196 | |
| 71 | V | L | -0.9906 | |
| 72 | S | L | -1.2108 | |
| 74 | D | L | -2.1395 | |
| 75 | R | L | -1.3460 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.9441 | |
| 78 | G | L | -0.5689 | |
| 79 | S | L | -0.7225 | |
| 80 | K | L | -0.9836 | |
| 83 | S | L | -0.8218 | |
| 84 | G | L | -0.7248 | |
| 85 | N | L | -0.6849 | |
| 86 | T | L | -0.7603 | |
| 87 | A | L | 0.0000 | |
| 88 | S | L | -0.3715 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.2248 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.0861 | |
| 93 | G | L | -1.1288 | |
| 94 | L | L | 0.0000 | |
| 95 | Q | L | -1.5411 | |
| 96 | A | L | -1.1367 | |
| 97 | E | L | -2.2557 | |
| 98 | D | L | 0.0000 | |
| 99 | E | L | -1.7902 | |
| 100 | A | L | 0.0000 | |
| 101 | D | L | -1.5512 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | S | L | 0.0000 | |
| 106 | S | L | 0.0000 | |
| 107 | Y | L | 0.6306 | |
| 108 | T | L | 0.0000 | |
| 109 | S | L | 1.0644 | |
| 113 | I | L | 1.8543 | |
| 114 | S | L | 1.0074 | |
| 115 | T | L | 0.0000 | |
| 116 | W | L | 0.0000 | |
| 117 | V | L | 0.0000 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | G | L | -0.9045 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -1.3470 | |
| 124 | L | L | 0.0000 | |
| 125 | T | L | -0.2663 | |
| 126 | V | L | 0.1583 | |
| 127 | L | L | 1.3543 |