Chain sequence(s) |
A: GRFGGNPGGFGNQGGFGNSRGGGAGLGNNQGSNMGGGMNFGAFSINPAMMAAAQAALQSSWGMMGMLASQQNQSGPSGNNQNQGNMQREPNQAFGSGNNSYSGSNSGAAIGWGSASNAGSGSGFNGGFGSSMDSKSSGWGM
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Mutated residues | SC106A |
Energy difference between WT (input) and mutated protein (by FoldX) | -0.305485 kcal/mol |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:01) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01) [INFO] runJob: Creating pdb object from: input.pdb (00:00:01) [INFO] FoldX: Starting FoldX energy minimalization (00:00:01) [INFO] FoldX: Building mutant model (00:00:16) [INFO] FoldX: Starting FoldX energy minimalization (00:00:17) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:31) [INFO] Main: Simulation completed successfully. (00:00:31) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | G | A | -0.9329 | |
2 | R | A | -1.2059 | |
3 | F | A | 0.3776 | |
4 | G | A | -0.5276 | |
5 | G | A | -1.1742 | |
6 | N | A | -1.6886 | |
7 | P | A | -1.1999 | |
8 | G | A | -0.7249 | |
9 | G | A | -0.2771 | |
10 | F | A | 0.9198 | |
11 | G | A | -0.7564 | |
12 | N | A | -1.9362 | |
13 | Q | A | -1.8497 | |
14 | G | A | -1.2180 | |
15 | G | A | -0.5342 | |
16 | F | A | 0.8664 | |
17 | G | A | -0.7041 | |
18 | N | A | -1.8334 | |
19 | S | A | -1.7750 | |
20 | R | A | -2.8147 | |
21 | G | A | -1.9931 | |
22 | G | A | -1.4403 | |
23 | G | A | -0.9688 | |
24 | A | A | -0.2346 | |
25 | G | A | -0.2349 | |
26 | L | A | 0.5112 | |
27 | G | A | -1.0641 | |
28 | N | A | -2.1746 | |
29 | N | A | -2.7379 | |
30 | Q | A | -2.7060 | |
31 | G | A | -1.9537 | |
32 | S | A | -1.2787 | |
33 | N | A | -1.5297 | |
34 | M | A | -0.0126 | |
35 | G | A | -0.4885 | |
36 | G | A | -0.6976 | |
37 | G | A | -0.3977 | |
38 | M | A | 0.5538 | |
39 | N | A | 0.1386 | |
40 | F | A | 2.0596 | |
41 | G | A | 0.9169 | |
42 | A | A | 1.3174 | |
43 | F | A | 2.3577 | |
44 | S | A | 1.1943 | |
45 | I | A | 1.7567 | |
46 | N | A | -0.0199 | |
47 | P | A | 0.0729 | |
48 | A | A | 0.2575 | |
49 | M | A | 0.8282 | |
50 | M | A | 0.9270 | |
51 | A | A | 0.2017 | |
52 | A | A | 0.1096 | |
53 | A | A | 0.0046 | |
54 | Q | A | -0.8874 | |
55 | A | A | -0.5317 | |
56 | A | A | -0.1745 | |
57 | L | A | -0.1568 | |
58 | Q | A | -0.9525 | |
59 | S | A | -0.3064 | |
60 | S | A | 0.3046 | |
61 | W | A | 1.2161 | |
62 | G | A | 0.5006 | |
63 | M | A | 1.2445 | |
64 | M | A | 1.7661 | |
65 | G | A | 0.8514 | |
66 | M | A | 1.0776 | |
67 | L | A | 1.0964 | |
68 | A | A | -0.2365 | |
69 | S | A | -1.0343 | |
70 | Q | A | -1.9573 | |
71 | Q | A | -2.5006 | |
72 | N | A | -2.8311 | |
73 | Q | A | -2.9039 | |
74 | S | A | -2.1641 | |
75 | G | A | -1.6846 | |
76 | P | A | -1.1558 | |
77 | S | A | -1.4447 | |
78 | G | A | -1.9443 | |
79 | N | A | -2.7748 | |
80 | N | A | -3.2505 | |
81 | Q | A | -3.3482 | |
82 | N | A | -3.3878 | |
83 | Q | A | -2.8112 | |
84 | G | A | -2.1118 | |
85 | N | A | -2.0421 | |
86 | M | A | -1.2160 | |
87 | Q | A | -2.4647 | |
88 | R | A | -3.4264 | |
89 | E | A | -3.5632 | |
90 | P | A | -2.6246 | |
91 | N | A | -2.5325 | |
92 | Q | A | -1.6074 | |
93 | A | A | -0.1154 | |
94 | F | A | 1.1249 | |
95 | G | A | -0.1178 | |
96 | S | A | -0.7835 | |
97 | G | A | -1.4961 | |
98 | N | A | -2.1460 | |
99 | N | A | -1.7968 | |
100 | S | A | -0.7449 | |
101 | Y | A | 0.3302 | |
102 | S | A | -0.1226 | |
103 | G | A | -0.2323 | |
104 | S | A | -0.6190 | |
105 | N | A | -1.1065 | |
106 | C | A | -0.1791 | mutated: SC106A |
107 | G | A | -0.2803 | |
108 | A | A | 0.3308 | |
109 | A | A | 0.8743 | |
110 | I | A | 2.0219 | |
111 | G | A | 0.9536 | |
112 | W | A | 1.2324 | |
113 | G | A | 0.1329 | |
114 | S | A | -0.4008 | |
115 | A | A | -0.4721 | |
116 | S | A | -0.9809 | |
117 | N | A | -1.4723 | |
118 | A | A | -0.9341 | |
119 | G | A | -0.9979 | |
120 | S | A | -0.7053 | |
121 | G | A | -0.6713 | |
122 | S | A | -0.5052 | |
123 | G | A | -0.0161 | |
124 | F | A | 0.8592 | |
125 | N | A | -0.4896 | |
126 | G | A | -0.1870 | |
127 | G | A | 0.1090 | |
128 | F | A | 1.1968 | |
129 | G | A | 0.2935 | |
130 | S | A | -0.0149 | |
131 | S | A | -0.2648 | |
132 | M | A | -0.3430 | |
133 | D | A | -1.9856 | |
134 | S | A | -1.7306 | |
135 | K | A | -2.4102 | |
136 | S | A | -1.4320 | |
137 | S | A | -0.8020 | |
138 | G | A | -0.2961 | |
139 | W | A | 0.9006 | |
140 | G | A | 0.4675 | |
141 | M | A | 1.0545 |