Project name: query_structure

Status: done

Started: 2026-03-16 23:08:32
Settings
Chain sequence(s) A: ESCVFIPCISSVIGCSCKSKVCYRNGVIPCG
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:17)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:17)
Show buried residues

Minimal score value
-1.5001
Maximal score value
2.9945
Average score
0.4732
Total score value
14.6693

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E A -0.2377
2 S A 0.4299
3 C A 1.2091
4 V A 2.0722
5 F A 2.7901
6 I A 2.1815
7 P A 1.2868
8 C A 0.0000
9 I A 2.5856
10 S A 1.7165
11 S A 1.5570
12 V A 2.9945
13 I A 2.6481
14 G A 0.4976
15 C A 0.0000
16 S A -0.4893
17 C A -0.5517
18 K A -1.4573
19 S A -1.0527
20 K A -0.8923
21 V A -0.6189
22 C A 0.0000
23 Y A -0.7228
24 R A -1.4290
25 N A -1.5001
26 G A -0.2379
27 V A 1.3567
28 I A 1.0819
29 P A 0.0118
30 C A 0.0401
31 G A -0.6004
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Laboratory of Theory of Biopolymers 2018