| Chain sequence(s) |
A: FEFEFEGSKGH
C: FEFEFEGSKGH B: FEFEFEGSKGH D: FEFEFEGSKGH input PDB |
| Selected Chain(s) | A,C,B,D |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:04)
[INFO] Main: Simulation completed successfully. (00:01:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | F | A | 0.1812 | |
| 2 | E | A | -1.8754 | |
| 3 | F | A | -1.4438 | |
| 4 | E | A | -3.0356 | |
| 5 | F | A | -1.7436 | |
| 6 | E | A | -2.8475 | |
| 7 | G | A | -1.9942 | |
| 8 | S | A | -2.0287 | |
| 9 | K | A | -2.4726 | |
| 10 | G | A | -2.2002 | |
| 11 | H | A | -2.0723 | |
| 1 | F | B | -0.1072 | |
| 2 | E | B | -1.9431 | |
| 3 | F | B | -1.4931 | |
| 4 | E | B | -3.0912 | |
| 5 | F | B | -1.8534 | |
| 6 | E | B | -2.8567 | |
| 7 | G | B | -1.7303 | |
| 8 | S | B | -1.8160 | |
| 9 | K | B | -1.9581 | |
| 10 | G | B | -2.2034 | |
| 11 | H | B | -1.9556 | |
| 1 | F | C | -0.3759 | |
| 2 | E | C | -2.0949 | |
| 3 | F | C | -1.5080 | |
| 4 | E | C | -3.0398 | |
| 5 | F | C | -1.7633 | |
| 6 | E | C | -2.8817 | |
| 7 | G | C | -1.9032 | |
| 8 | S | C | -1.8407 | |
| 9 | K | C | -2.0511 | |
| 10 | G | C | -2.0677 | |
| 11 | H | C | -1.9947 | |
| 1 | F | D | -0.5189 | |
| 2 | E | D | -2.1963 | |
| 3 | F | D | -1.6696 | |
| 4 | E | D | -3.1580 | |
| 5 | F | D | -1.9533 | |
| 6 | E | D | -2.9143 | |
| 7 | G | D | -1.6513 | |
| 8 | S | D | -1.6351 | |
| 9 | K | D | -1.6901 | |
| 10 | G | D | -2.0320 | |
| 11 | H | D | -1.8693 |