Project name: query_structure

Status: done

Started: 2026-03-16 22:54:14
Settings
Chain sequence(s) A: APICGESCFTGKCYTVQCSCSWPVCTRNG
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:11)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:12)
Show buried residues

Minimal score value
-2.2796
Maximal score value
1.8214
Average score
-0.033
Total score value
-0.9573

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 A A -0.0822
2 P A -0.7462
3 I A -0.0571
4 C A -0.3227
5 G A -0.5482
6 E A -0.2913
7 S A 0.5541
8 C A 0.0000
9 F A 1.8214
10 T A 0.4577
11 G A -0.1512
12 K A -0.9178
13 C A 0.0000
14 Y A 1.1567
15 T A 0.6322
16 V A 1.1654
17 Q A -1.0749
18 C A -0.9480
19 S A -0.4055
20 C A 0.5198
21 S A 0.8231
22 W A 1.6656
23 P A 1.3977
24 V A 1.1157
25 C A 0.0000
26 T A -0.7656
27 R A -2.2796
28 N A -2.0473
29 G A -1.6291
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Laboratory of Theory of Biopolymers 2018