| Chain sequence(s) |
A: APICGESCFTGKCYTVQCSCSWPVCTRNG
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:11)
[INFO] Main: Simulation completed successfully. (00:00:12)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | -0.0822 | |
| 2 | P | A | -0.7462 | |
| 3 | I | A | -0.0571 | |
| 4 | C | A | -0.3227 | |
| 5 | G | A | -0.5482 | |
| 6 | E | A | -0.2913 | |
| 7 | S | A | 0.5541 | |
| 8 | C | A | 0.0000 | |
| 9 | F | A | 1.8214 | |
| 10 | T | A | 0.4577 | |
| 11 | G | A | -0.1512 | |
| 12 | K | A | -0.9178 | |
| 13 | C | A | 0.0000 | |
| 14 | Y | A | 1.1567 | |
| 15 | T | A | 0.6322 | |
| 16 | V | A | 1.1654 | |
| 17 | Q | A | -1.0749 | |
| 18 | C | A | -0.9480 | |
| 19 | S | A | -0.4055 | |
| 20 | C | A | 0.5198 | |
| 21 | S | A | 0.8231 | |
| 22 | W | A | 1.6656 | |
| 23 | P | A | 1.3977 | |
| 24 | V | A | 1.1157 | |
| 25 | C | A | 0.0000 | |
| 26 | T | A | -0.7656 | |
| 27 | R | A | -2.2796 | |
| 28 | N | A | -2.0473 | |
| 29 | G | A | -1.6291 |