Project name: afbedf1cb21b4b9

Status: done

Started: 2024-12-20 12:06:21
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Chain sequence(s) A: DVVMTQTPLSLSVTPGEPASISCRSTQSLLDGVNPSFDWYVQKPGQSPQLLIHRGFYRASGVPDRFSGSGSGTDFTLRISRVEAEDVGVYYCMQRIEFPLTFGGGTKVEIK
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:54)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:55)
Show buried residues

Minimal score value
-3.0844
Maximal score value
2.1641
Average score
-0.3488
Total score value
-38.7127

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 D A -1.1150
2 V A 0.6368
3 V A 1.4526
4 M A 0.6321
5 T A -0.1222
6 Q A -0.0508
7 T A 0.0145
8 P A 0.6530
9 L A 1.7933
10 S A 1.1372
11 L A 1.4365
12 S A 0.5944
13 V A 0.0258
14 T A -0.8032
15 P A -1.7397
16 G A -1.9990
17 E A -2.3506
18 P A -2.1160
19 A A -1.0696
20 S A -0.6679
21 I A 0.0000
22 S A -0.7916
23 C A 0.0000
24 R A -1.9874
25 S A 0.0000
26 T A 0.1884
27 Q A 0.4329
28 S A 0.7069
29 L A 1.5909
30 L A 1.2799
31 D A -0.5726
34 G A 0.2500
35 V A 0.1323
36 N A -1.2276
37 P A -1.1604
38 S A -1.4987
39 F A 0.0000
40 D A 0.0000
41 W A 0.0000
42 Y A 0.4472
43 V A 0.0000
44 Q A -0.3556
45 K A -0.9516
46 P A -0.8963
47 G A -1.4188
48 Q A -2.0074
49 S A -1.3863
50 P A -0.9271
51 Q A -0.9746
52 L A -0.2294
53 L A 0.0000
54 I A 0.0000
55 H A -0.2877
56 R A -1.0141
57 G A 0.0000
65 F A 1.6076
66 Y A 1.1151
67 R A -0.7885
68 A A -0.5756
69 S A -0.7248
70 G A -1.0091
71 V A 0.0000
72 P A -1.4070
74 D A -2.3364
75 R A -2.2730
76 F A 0.0000
77 S A -0.7471
78 G A -0.0408
79 S A 0.0185
80 G A -0.5117
83 S A -0.9413
84 G A -1.0654
85 T A -1.2248
86 D A -1.7069
87 F A 0.0000
88 T A -0.7004
89 L A 0.0000
90 R A -1.7101
91 I A 0.0000
92 S A -2.3352
93 R A -3.0844
94 V A -2.2070
95 E A -2.4017
96 A A -1.0861
97 E A -1.7926
98 D A 0.0000
99 V A 1.2735
100 G A 1.0030
101 V A 2.1444
102 Y A 1.4447
103 Y A 1.3226
104 C A 0.4022
105 M A 0.0251
106 Q A -0.9670
107 R A -2.0822
108 I A -0.8041
109 E A -1.1380
114 F A 0.8771
115 P A 0.9404
116 L A 2.1641
117 T A 1.6871
118 F A 1.8546
119 G A 0.0915
120 G A -0.6467
121 G A -0.7672
122 T A -1.0225
123 K A -1.4928
124 V A 0.4260
125 E A -0.7740
126 I A 0.6798
127 K A -1.1091
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Laboratory of Theory of Biopolymers 2018