| Chain sequence(s) |
A: AQEVQQSPHCTTVPVGASVNITCSTSGGLRGIYLRQLGPQPQDIIYYEDGVVPTTDRRFRGRIDFSGSQDNLTITMHRLQLSDTGTYTCQAITEVNVYGSGTLVLVTEEQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:01)
[INFO] Main: Simulation completed successfully. (00:01:02)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | -0.3313 | |
| 2 | Q | A | -1.2297 | |
| 3 | E | A | -2.2742 | |
| 4 | V | A | 0.0000 | |
| 5 | Q | A | -1.8918 | |
| 6 | Q | A | -1.3298 | |
| 7 | S | A | -1.0009 | |
| 8 | P | A | -0.8772 | |
| 9 | H | A | -0.8624 | |
| 10 | C | A | 0.0753 | |
| 11 | T | A | 0.0293 | |
| 12 | T | A | 0.3458 | |
| 13 | V | A | 0.0000 | |
| 14 | P | A | -0.9625 | |
| 15 | V | A | -0.9913 | |
| 16 | G | A | -1.4593 | |
| 17 | A | A | -0.9695 | |
| 18 | S | A | -1.1674 | |
| 19 | V | A | 0.0000 | |
| 20 | N | A | -1.5378 | |
| 21 | I | A | 0.0000 | |
| 22 | T | A | -1.0995 | |
| 23 | C | A | 0.0000 | |
| 24 | S | A | -1.9251 | |
| 25 | T | A | -2.0050 | |
| 26 | S | A | -1.7324 | |
| 27 | G | A | -1.3016 | |
| 28 | G | A | -1.3210 | |
| 29 | L | A | -1.7882 | |
| 30 | R | A | -2.5343 | |
| 31 | G | A | 0.0000 | |
| 32 | I | A | 0.0000 | |
| 33 | Y | A | 0.0954 | |
| 34 | L | A | 0.0000 | |
| 35 | R | A | -0.5594 | |
| 36 | Q | A | -0.6026 | |
| 37 | L | A | -0.0127 | |
| 38 | G | A | -0.8320 | |
| 39 | P | A | -0.9822 | |
| 40 | Q | A | -1.4627 | |
| 41 | P | A | -1.0763 | |
| 42 | Q | A | -1.2194 | |
| 43 | D | A | -1.1717 | |
| 44 | I | A | 0.0000 | |
| 45 | I | A | 0.0000 | |
| 46 | Y | A | 0.3666 | |
| 47 | Y | A | -0.0787 | |
| 48 | E | A | -0.9738 | |
| 49 | D | A | -1.8240 | |
| 50 | G | A | -0.1666 | |
| 51 | V | A | 1.7718 | |
| 52 | V | A | 2.1821 | |
| 53 | P | A | 1.0228 | |
| 54 | T | A | -0.0199 | |
| 55 | T | A | -1.3662 | |
| 56 | D | A | -2.1209 | |
| 57 | R | A | -3.0046 | |
| 58 | R | A | -2.1621 | |
| 59 | F | A | 0.0000 | |
| 60 | R | A | -3.1849 | |
| 61 | G | A | -2.2737 | |
| 62 | R | A | -2.1130 | |
| 63 | I | A | -1.6417 | |
| 64 | D | A | -1.9931 | |
| 65 | F | A | -0.7223 | |
| 66 | S | A | -0.9610 | |
| 67 | G | A | -1.3199 | |
| 68 | S | A | -1.7712 | |
| 69 | Q | A | -2.1877 | |
| 70 | D | A | -2.8534 | |
| 71 | N | A | -2.4331 | |
| 72 | L | A | 0.0000 | |
| 73 | T | A | -1.1870 | |
| 74 | I | A | 0.0000 | |
| 75 | T | A | -1.1335 | |
| 76 | M | A | 0.0000 | |
| 77 | H | A | -1.9229 | |
| 78 | R | A | -2.4153 | |
| 79 | L | A | 0.0000 | |
| 80 | Q | A | -1.1582 | |
| 81 | L | A | 0.1661 | |
| 82 | S | A | 0.0585 | |
| 83 | D | A | 0.0000 | |
| 84 | T | A | 0.2704 | |
| 85 | G | A | 0.2950 | |
| 86 | T | A | 0.1421 | |
| 87 | Y | A | 0.0000 | |
| 88 | T | A | 0.0000 | |
| 89 | C | A | 0.0000 | |
| 90 | Q | A | 0.0000 | |
| 91 | A | A | 0.0000 | |
| 92 | I | A | -0.5702 | |
| 93 | T | A | 0.0000 | |
| 94 | E | A | -1.4788 | |
| 95 | V | A | 0.4254 | |
| 96 | N | A | -0.5698 | |
| 97 | V | A | -0.0661 | |
| 98 | Y | A | 0.3782 | |
| 99 | G | A | -0.4875 | |
| 100 | S | A | -0.4545 | |
| 101 | G | A | 0.0000 | |
| 102 | T | A | 0.0000 | |
| 103 | L | A | 0.4676 | |
| 104 | V | A | 0.0000 | |
| 105 | L | A | 0.6228 | |
| 106 | V | A | 0.1251 | |
| 107 | T | A | -1.1593 | |
| 108 | E | A | -2.8011 | |
| 109 | E | A | -3.2455 | |
| 110 | Q | A | -2.5526 |