| Chain sequence(s) |
A: GPLPLNPEPPLRSTDDYVTPTDLLYIAETDLITEEGNPFKDIVENGKVKVPRVSAYDYIVYKLTLPDPNTMPLPSSDFVDPSTEILIWQLKAYYIGIKGPLGTGSYGHPHFNALGDVDAPTKPVHPGPDDTVALSWTPKLIQEYIIGDLPPLGVYTTLAPPAPGLPPGAKPPTVLKSTIIEHGDVADIGYGAKDFKELLPEKDDVPDIILDTKTIVPDYERMKADPLGRRMFDYFRYEKSYDSKRLVRDGPDLEPLPALPPPPLLYTPPPPSSPYAVLPPRNYFTLPDRGEITEADLLFNKPIFLEKTEGKNNGILWGNQLYVTILDNRRDTIEEIRTRVSTPEPDVYDPENYVTSYRYKREYQLSLIIQLCKIPLTPETLAELERIDPSFLVNAKLPFIPPVERPDPYAGKKFKEIDLTNKLSSDLEKSELGRLYLNR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.2077 | |
| 2 | P | A | 0.4243 | |
| 3 | L | A | 1.3947 | |
| 4 | P | A | 0.7040 | |
| 5 | L | A | 0.8617 | |
| 6 | N | A | -1.0082 | |
| 7 | P | A | -1.4746 | |
| 8 | E | A | -2.2050 | |
| 9 | P | A | -1.5674 | |
| 10 | P | A | -1.0177 | |
| 11 | L | A | -0.9177 | |
| 12 | R | A | -1.7287 | |
| 13 | S | A | -1.9039 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -3.1654 | |
| 16 | D | A | -2.9483 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | T | A | -0.9470 | |
| 20 | P | A | -0.9459 | |
| 21 | T | A | -0.9229 | |
| 22 | D | A | -1.6412 | |
| 23 | L | A | -0.4997 | |
| 24 | L | A | -0.2087 | |
| 25 | Y | A | -0.1155 | |
| 26 | I | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | E | A | -1.1753 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -1.6029 | |
| 31 | L | A | -0.2968 | |
| 32 | I | A | -0.2024 | |
| 33 | T | A | -0.8631 | |
| 34 | E | A | -1.3587 | |
| 35 | E | A | -2.1543 | |
| 36 | G | A | 0.0000 | |
| 37 | N | A | 0.0000 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.7518 | |
| 40 | K | A | -1.7316 | |
| 41 | D | A | -1.4999 | |
| 42 | I | A | -0.1962 | |
| 43 | V | A | -0.0288 | |
| 44 | E | A | -1.9538 | |
| 45 | N | A | -2.3049 | |
| 46 | G | A | -1.6521 | |
| 47 | K | A | -1.8854 | |
| 48 | V | A | -0.2561 | |
| 49 | K | A | -1.4587 | |
| 50 | V | A | -0.9392 | |
| 51 | P | A | -1.0080 | |
| 52 | R | A | -1.5852 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | A | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | D | A | 0.0000 | |
| 58 | Y | A | 0.0000 | |
| 59 | I | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | Y | A | 0.0000 | |
| 62 | K | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | T | A | -1.2549 | |
| 65 | L | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.0286 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.0070 | |
| 70 | T | A | -0.4537 | |
| 71 | M | A | -0.1776 | |
| 72 | P | A | -0.1095 | |
| 73 | L | A | 0.0287 | |
| 74 | P | A | -0.2782 | |
| 75 | S | A | -0.6800 | |
| 76 | S | A | -1.1815 | |
| 77 | D | A | -2.0683 | |
| 78 | F | A | -0.9637 | |
| 79 | V | A | 0.0000 | |
| 80 | D | A | -2.0410 | |
| 81 | P | A | -1.4254 | |
| 82 | S | A | -0.9382 | |
| 83 | T | A | -0.8850 | |
| 84 | E | A | -1.1150 | |
| 85 | I | A | 0.0000 | |
| 86 | L | A | 0.0000 | |
| 87 | I | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | Q | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | K | A | -0.6350 | |
| 92 | A | A | 0.0000 | |
| 93 | Y | A | 0.0000 | |
| 94 | Y | A | -0.5119 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | 0.0000 | |
| 97 | I | A | 0.0000 | |
| 98 | K | A | -1.5702 | |
| 99 | G | A | -1.2228 | |
| 100 | P | A | -0.5592 | |
| 101 | L | A | -0.2825 | |
| 102 | G | A | 0.0128 | |
| 103 | T | A | -0.2608 | |
| 104 | G | A | 0.0000 | |
| 105 | S | A | -0.1472 | |
| 106 | Y | A | 0.0000 | |
| 107 | G | A | -0.5207 | |
| 108 | H | A | -0.8363 | |
| 109 | P | A | -0.6243 | |
| 110 | H | A | -1.4374 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | 0.0000 | |
| 113 | A | A | 0.0000 | |
| 114 | L | A | -0.4726 | |
| 115 | G | A | -0.7937 | |
| 116 | D | A | -1.5645 | |
| 117 | V | A | -0.9838 | |
| 118 | D | A | -1.7224 | |
| 119 | A | A | -1.0828 | |
| 120 | P | A | -0.9941 | |
| 121 | T | A | -1.1238 | |
| 122 | K | A | -1.7958 | |
| 123 | P | A | -0.4200 | |
| 124 | V | A | -0.2032 | |
| 125 | H | A | -0.3416 | |
| 126 | P | A | -0.8317 | |
| 127 | G | A | -1.2861 | |
| 128 | P | A | -1.3926 | |
| 129 | D | A | -2.3074 | |
| 130 | D | A | -1.6212 | |
| 131 | T | A | -0.8629 | |
| 132 | V | A | 0.2575 | |
| 133 | A | A | 0.1629 | |
| 134 | L | A | 0.2214 | |
| 135 | S | A | -0.1394 | |
| 136 | W | A | 0.0000 | |
| 137 | T | A | -0.2484 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | L | A | 0.0000 | |
| 141 | I | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | E | A | 0.0000 | |
| 144 | Y | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | I | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | D | A | 0.0000 | |
| 149 | L | A | 0.0912 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | L | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | V | A | -0.0408 | |
| 155 | Y | A | 0.0000 | |
| 156 | T | A | 0.1547 | |
| 157 | T | A | 0.0000 | |
| 158 | L | A | 0.2970 | |
| 159 | A | A | 0.3716 | |
| 160 | P | A | -0.1963 | |
| 161 | P | A | -0.4985 | |
| 162 | A | A | -0.2100 | |
| 163 | P | A | -0.3713 | |
| 164 | G | A | -0.3486 | |
| 165 | L | A | -0.1089 | |
| 166 | P | A | -0.5117 | |
| 167 | P | A | -0.7173 | |
| 168 | G | A | -0.7070 | |
| 169 | A | A | -0.7884 | |
| 170 | K | A | -1.8243 | |
| 171 | P | A | -0.9738 | |
| 172 | P | A | -0.3568 | |
| 173 | T | A | 0.3998 | |
| 174 | V | A | 1.4186 | |
| 175 | L | A | 1.3936 | |
| 176 | K | A | -0.3072 | |
| 177 | S | A | -0.3603 | |
| 178 | T | A | -0.0827 | |
| 179 | I | A | -0.2193 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | -1.2769 | |
| 182 | H | A | -1.4013 | |
| 183 | G | A | -0.9793 | |
| 184 | D | A | -0.9442 | |
| 185 | V | A | 0.0000 | |
| 186 | A | A | 0.0000 | |
| 187 | D | A | -0.4133 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | -0.5418 | |
| 190 | Y | A | -0.1991 | |
| 191 | G | A | -0.4381 | |
| 192 | A | A | -0.3260 | |
| 193 | K | A | -1.0786 | |
| 194 | D | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.3679 | |
| 197 | E | A | -2.3441 | |
| 198 | L | A | -1.1787 | |
| 199 | L | A | -1.7202 | |
| 200 | P | A | -2.3671 | |
| 201 | E | A | -3.1673 | |
| 202 | K | A | -3.3981 | |
| 203 | D | A | -2.0571 | |
| 204 | D | A | -1.3862 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | D | A | -1.4167 | |
| 208 | I | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | L | A | -1.7599 | |
| 211 | D | A | -2.5985 | |
| 212 | T | A | -1.7052 | |
| 213 | K | A | -1.8237 | |
| 214 | T | A | 0.0000 | |
| 215 | I | A | 0.0000 | |
| 216 | V | A | 0.2455 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | -1.3605 | |
| 219 | Y | A | 0.0000 | |
| 220 | E | A | -3.2328 | |
| 221 | R | A | -3.2065 | |
| 222 | M | A | 0.0000 | |
| 223 | K | A | -2.9345 | |
| 224 | A | A | -1.9157 | |
| 225 | D | A | -1.8454 | |
| 226 | P | A | -1.0433 | |
| 227 | L | A | -0.8556 | |
| 228 | G | A | 0.0000 | |
| 229 | R | A | 0.0000 | |
| 230 | R | A | -0.6058 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | D | A | -0.6012 | |
| 234 | Y | A | 0.0306 | |
| 235 | F | A | -0.0522 | |
| 236 | R | A | -1.1256 | |
| 237 | Y | A | -0.9243 | |
| 238 | E | A | -1.2755 | |
| 239 | K | A | -1.3063 | |
| 240 | S | A | -0.8421 | |
| 241 | Y | A | -0.4933 | |
| 242 | D | A | -2.1240 | |
| 243 | S | A | -1.8285 | |
| 244 | K | A | -2.8069 | |
| 245 | R | A | -2.7650 | |
| 246 | L | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | 0.0000 | |
| 249 | D | A | -1.3638 | |
| 250 | G | A | -0.9321 | |
| 251 | P | A | -1.1394 | |
| 252 | D | A | -1.5902 | |
| 253 | L | A | -0.3623 | |
| 254 | E | A | -1.8273 | |
| 255 | P | A | -1.0331 | |
| 256 | L | A | 0.1757 | |
| 257 | P | A | 0.0319 | |
| 258 | A | A | 0.3547 | |
| 259 | L | A | 0.7445 | |
| 260 | P | A | -0.0711 | |
| 261 | P | A | -0.2310 | |
| 262 | P | A | 0.1603 | |
| 263 | P | A | 0.8971 | |
| 264 | L | A | 2.2616 | |
| 265 | L | A | 2.4772 | |
| 266 | Y | A | 1.4865 | |
| 267 | T | A | 0.4730 | |
| 268 | P | A | 0.3651 | |
| 269 | P | A | 0.1952 | |
| 270 | P | A | -0.3952 | |
| 271 | P | A | -0.1205 | |
| 272 | S | A | -0.1148 | |
| 273 | S | A | 0.2701 | |
| 274 | P | A | 0.4420 | |
| 275 | Y | A | 1.6229 | |
| 276 | A | A | 1.4092 | |
| 277 | V | A | 2.4226 | |
| 278 | L | A | 1.8630 | |
| 279 | P | A | 0.3180 | |
| 280 | P | A | 0.0000 | |
| 281 | R | A | -1.3810 | |
| 282 | N | A | -1.2966 | |
| 283 | Y | A | 0.1375 | |
| 284 | F | A | -0.3753 | |
| 285 | T | A | -1.2137 | |
| 286 | L | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | D | A | -1.1087 | |
| 289 | R | A | 0.0000 | |
| 290 | G | A | -1.2382 | |
| 291 | E | A | -1.8665 | |
| 292 | I | A | -1.0983 | |
| 293 | T | A | -1.4145 | |
| 294 | E | A | -2.0286 | |
| 295 | A | A | -1.5860 | |
| 296 | D | A | -1.9724 | |
| 297 | L | A | -1.2379 | |
| 298 | L | A | -0.8413 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.2747 | |
| 301 | K | A | -1.5139 | |
| 302 | P | A | -0.5804 | |
| 303 | I | A | 0.0462 | |
| 304 | F | A | -0.3300 | |
| 305 | L | A | 0.0000 | |
| 306 | E | A | -2.5644 | |
| 307 | K | A | -3.3496 | |
| 308 | T | A | 0.0000 | |
| 309 | E | A | -2.7143 | |
| 310 | G | A | -1.9153 | |
| 311 | K | A | -1.9485 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | -1.8184 | |
| 314 | G | A | 0.0000 | |
| 315 | I | A | 0.0000 | |
| 316 | L | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | G | A | -0.7184 | |
| 319 | N | A | -0.6291 | |
| 320 | Q | A | -0.6737 | |
| 321 | L | A | 0.0000 | |
| 322 | Y | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | I | A | 0.0000 | |
| 326 | L | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | R | A | 0.0000 | |
| 330 | R | A | -0.4808 | |
| 331 | D | A | 0.0000 | |
| 332 | T | A | -0.7756 | |
| 333 | I | A | -0.8785 | |
| 334 | E | A | -2.1162 | |
| 335 | E | A | -2.1825 | |
| 336 | I | A | -0.5325 | |
| 337 | R | A | -1.3917 | |
| 338 | T | A | -0.6277 | |
| 339 | R | A | -1.3965 | |
| 340 | V | A | 0.5159 | |
| 341 | S | A | -0.4757 | |
| 342 | T | A | -0.8268 | |
| 343 | P | A | -1.4708 | |
| 344 | E | A | -2.1517 | |
| 345 | P | A | -1.3530 | |
| 346 | D | A | -1.2447 | |
| 347 | V | A | 1.0377 | |
| 348 | Y | A | 0.8863 | |
| 349 | D | A | -0.5636 | |
| 350 | P | A | -0.8520 | |
| 351 | E | A | -1.5983 | |
| 352 | N | A | -0.8719 | |
| 353 | Y | A | -0.0938 | |
| 354 | V | A | 1.0491 | |
| 355 | T | A | -0.2235 | |
| 356 | S | A | -0.2511 | |
| 357 | Y | A | -0.5864 | |
| 358 | R | A | -1.2422 | |
| 359 | Y | A | 0.0000 | |
| 360 | K | A | -2.1431 | |
| 361 | R | A | 0.0000 | |
| 362 | E | A | -1.0576 | |
| 363 | Y | A | 0.0000 | |
| 364 | Q | A | -0.8964 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | 0.0000 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | I | A | 0.0000 | |
| 370 | Q | A | -0.3666 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.5892 | |
| 374 | I | A | 0.0000 | |
| 375 | P | A | -0.7009 | |
| 376 | L | A | -0.5775 | |
| 377 | T | A | -0.7021 | |
| 378 | P | A | -1.0192 | |
| 379 | E | A | -1.8315 | |
| 380 | T | A | 0.0000 | |
| 381 | L | A | -0.7947 | |
| 382 | A | A | -1.1248 | |
| 383 | E | A | 0.0000 | |
| 384 | L | A | 0.0000 | |
| 385 | E | A | -1.6533 | |
| 386 | R | A | -1.6093 | |
| 387 | I | A | 0.0000 | |
| 388 | D | A | -0.9297 | |
| 389 | P | A | -1.2161 | |
| 390 | S | A | -1.3140 | |
| 391 | F | A | 0.0000 | |
| 392 | L | A | 0.0000 | |
| 393 | V | A | -1.0907 | |
| 394 | N | A | -2.0670 | |
| 395 | A | A | -1.6065 | |
| 396 | K | A | -1.7293 | |
| 397 | L | A | 0.0000 | |
| 398 | P | A | 0.2610 | |
| 399 | F | A | 1.6711 | |
| 400 | I | A | 0.8404 | |
| 401 | P | A | 0.2726 | |
| 402 | P | A | -0.4358 | |
| 403 | V | A | -0.0177 | |
| 404 | E | A | -2.2222 | |
| 405 | R | A | -2.6885 | |
| 406 | P | A | -1.9553 | |
| 407 | D | A | -2.1862 | |
| 408 | P | A | -1.2513 | |
| 409 | Y | A | -0.9306 | |
| 410 | A | A | -1.1362 | |
| 411 | G | A | -1.3967 | |
| 412 | K | A | -2.0037 | |
| 413 | K | A | -2.6119 | |
| 414 | F | A | -1.6824 | |
| 415 | K | A | -1.7020 | |
| 416 | E | A | -2.4765 | |
| 417 | I | A | -1.8057 | |
| 418 | D | A | -2.5203 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.4037 | |
| 421 | N | A | -1.8316 | |
| 422 | K | A | -1.7646 | |
| 423 | L | A | -0.6629 | |
| 424 | S | A | -0.8176 | |
| 425 | S | A | -0.7660 | |
| 426 | D | A | -1.9205 | |
| 427 | L | A | -2.0286 | |
| 428 | E | A | -3.5258 | |
| 429 | K | A | -3.5637 | |
| 430 | S | A | 0.0000 | |
| 431 | E | A | -2.9510 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -3.2789 | |
| 435 | L | A | -1.3435 | |
| 436 | Y | A | -0.8364 | |
| 437 | L | A | -0.5758 | |
| 438 | N | A | -1.7692 | |
| 439 | R | A | -2.0314 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine