| Chain sequence(s) |
A: GSHMDLETLRARREAVLSLCARHGAVRVRVFGSVARGEAREDSDLDLLVAFEEGRTLLDHARLKLALEGLLGVRVDIVSERGLAPRLREQVLREAIPL
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:08)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:08)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:08)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:08)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:08)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:54)
[INFO] Main: Simulation completed successfully. (00:01:55)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| -2 | G | A | -0.6839 | |
| -1 | S | A | -1.1373 | |
| 0 | H | A | -1.7028 | |
| 1 | M | A | -1.3412 | |
| 2 | D | A | -2.1718 | |
| 3 | L | A | -1.8404 | |
| 4 | E | A | -2.6150 | |
| 5 | T | A | -1.9922 | |
| 6 | L | A | 0.0000 | |
| 7 | R | A | -3.0736 | |
| 8 | A | A | -2.3365 | |
| 9 | R | A | -2.3071 | |
| 10 | R | A | 0.0000 | |
| 11 | E | A | -2.3356 | |
| 12 | A | A | -1.2238 | |
| 13 | V | A | 0.0000 | |
| 14 | L | A | -0.5175 | |
| 15 | S | A | -0.6974 | |
| 16 | L | A | -0.5761 | |
| 17 | C | A | 0.0000 | |
| 18 | A | A | -0.2093 | |
| 19 | R | A | -1.4765 | |
| 20 | H | A | 0.0000 | |
| 21 | G | A | 0.0000 | |
| 22 | A | A | 0.0000 | |
| 23 | V | A | 0.8890 | |
| 24 | R | A | -0.0476 | |
| 25 | V | A | 0.0000 | |
| 26 | R | A | 0.1141 | |
| 27 | V | A | 0.0000 | |
| 28 | F | A | -1.0198 | |
| 29 | G | A | -1.4778 | |
| 30 | S | A | -1.8881 | |
| 31 | V | A | 0.0000 | |
| 32 | A | A | -1.3674 | |
| 33 | R | A | -2.5981 | |
| 34 | G | A | -2.5844 | |
| 35 | E | A | -2.7863 | |
| 36 | A | A | -3.0695 | |
| 37 | R | A | -4.0617 | |
| 38 | E | A | -3.8861 | |
| 39 | D | A | -3.7344 | |
| 40 | S | A | -3.1501 | |
| 41 | D | A | -2.5360 | |
| 42 | L | A | 0.0000 | |
| 43 | D | A | -1.1324 | |
| 44 | L | A | 0.0000 | |
| 45 | L | A | 0.0000 | |
| 46 | V | A | 0.0000 | |
| 47 | A | A | -0.5897 | |
| 48 | F | A | -0.8707 | |
| 49 | E | A | -2.4052 | |
| 50 | E | A | -2.9761 | |
| 51 | G | A | -2.0389 | |
| 52 | R | A | -1.2800 | |
| 53 | T | A | 0.1015 | |
| 54 | L | A | 1.6919 | |
| 55 | L | A | 1.4040 | |
| 56 | D | A | -0.1205 | |
| 57 | H | A | 0.3449 | |
| 58 | A | A | 0.1460 | |
| 59 | R | A | -1.0539 | |
| 60 | L | A | 0.0000 | |
| 61 | K | A | -0.7144 | |
| 62 | L | A | 0.0139 | |
| 63 | A | A | -0.2465 | |
| 64 | L | A | 0.0000 | |
| 65 | E | A | -1.0107 | |
| 66 | G | A | -0.5232 | |
| 67 | L | A | -0.0378 | |
| 68 | L | A | 0.0000 | |
| 69 | G | A | -0.6764 | |
| 70 | V | A | -0.7555 | |
| 71 | R | A | -2.2025 | |
| 72 | V | A | 0.0000 | |
| 73 | D | A | -1.5235 | |
| 74 | I | A | -0.4180 | |
| 75 | V | A | -0.2169 | |
| 76 | S | A | -0.4436 | |
| 77 | E | A | 0.0000 | |
| 78 | R | A | -2.0033 | |
| 79 | G | A | -1.3214 | |
| 80 | L | A | -1.1193 | |
| 81 | A | A | -1.3980 | |
| 82 | P | A | -2.0087 | |
| 83 | R | A | -2.6028 | |
| 84 | L | A | -1.5855 | |
| 85 | R | A | -2.6544 | |
| 86 | E | A | -3.4801 | |
| 87 | Q | A | -3.1158 | |
| 88 | V | A | 0.0000 | |
| 89 | L | A | -1.8835 | |
| 90 | R | A | -2.7488 | |
| 91 | E | A | -2.2851 | |
| 92 | A | A | 0.0000 | |
| 93 | I | A | 0.0943 | |
| 94 | P | A | 0.3951 | |
| 95 | L | A | 0.4276 |