Project name: ProtoPol

Status: done

Started: 2026-04-22 18:58:25
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Chain sequence(s) A: GSHMDLETLRARREAVLSLCARHGAVRVRVFGSVARGEAREDSDLDLLVAFEEGRTLLDHARLKLALEGLLGVRVDIVSERGLAPRLREQVLREAIPL
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:08)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:08)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:08)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:08)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:08)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:54)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:55)
Show buried residues

Minimal score value
-4.0617
Maximal score value
1.6919
Average score
-1.0843
Total score value
-106.2661

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
-2 G A -0.6839
-1 S A -1.1373
0 H A -1.7028
1 M A -1.3412
2 D A -2.1718
3 L A -1.8404
4 E A -2.6150
5 T A -1.9922
6 L A 0.0000
7 R A -3.0736
8 A A -2.3365
9 R A -2.3071
10 R A 0.0000
11 E A -2.3356
12 A A -1.2238
13 V A 0.0000
14 L A -0.5175
15 S A -0.6974
16 L A -0.5761
17 C A 0.0000
18 A A -0.2093
19 R A -1.4765
20 H A 0.0000
21 G A 0.0000
22 A A 0.0000
23 V A 0.8890
24 R A -0.0476
25 V A 0.0000
26 R A 0.1141
27 V A 0.0000
28 F A -1.0198
29 G A -1.4778
30 S A -1.8881
31 V A 0.0000
32 A A -1.3674
33 R A -2.5981
34 G A -2.5844
35 E A -2.7863
36 A A -3.0695
37 R A -4.0617
38 E A -3.8861
39 D A -3.7344
40 S A -3.1501
41 D A -2.5360
42 L A 0.0000
43 D A -1.1324
44 L A 0.0000
45 L A 0.0000
46 V A 0.0000
47 A A -0.5897
48 F A -0.8707
49 E A -2.4052
50 E A -2.9761
51 G A -2.0389
52 R A -1.2800
53 T A 0.1015
54 L A 1.6919
55 L A 1.4040
56 D A -0.1205
57 H A 0.3449
58 A A 0.1460
59 R A -1.0539
60 L A 0.0000
61 K A -0.7144
62 L A 0.0139
63 A A -0.2465
64 L A 0.0000
65 E A -1.0107
66 G A -0.5232
67 L A -0.0378
68 L A 0.0000
69 G A -0.6764
70 V A -0.7555
71 R A -2.2025
72 V A 0.0000
73 D A -1.5235
74 I A -0.4180
75 V A -0.2169
76 S A -0.4436
77 E A 0.0000
78 R A -2.0033
79 G A -1.3214
80 L A -1.1193
81 A A -1.3980
82 P A -2.0087
83 R A -2.6028
84 L A -1.5855
85 R A -2.6544
86 E A -3.4801
87 Q A -3.1158
88 V A 0.0000
89 L A -1.8835
90 R A -2.7488
91 E A -2.2851
92 A A 0.0000
93 I A 0.0943
94 P A 0.3951
95 L A 0.4276
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Laboratory of Theory of Biopolymers 2018