| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIVVNGKVLVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTIGHPLFNKFGDTENPTAPQHETADVRVAFSFDPKQTQLFIVGCEPPTGEHWDIAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYRRAGPDGHPLPDAPPPSPLYVKPPASSPYATLPSYDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLSTPKVNVYDPANFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9485 | |
| 2 | L | A | 1.9715 | |
| 3 | P | A | 0.6503 | |
| 4 | P | A | 0.3475 | |
| 5 | T | A | 0.1104 | |
| 6 | T | A | 0.1268 | |
| 7 | P | A | 0.1794 | |
| 8 | V | A | 1.2237 | |
| 9 | A | A | 0.0294 | |
| 10 | K | A | -1.1635 | |
| 11 | V | A | -0.4141 | |
| 12 | Q | A | -1.5336 | |
| 13 | S | A | -1.6024 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4082 | |
| 16 | E | A | -2.4339 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4596 | |
| 20 | P | A | 0.1086 | |
| 21 | T | A | 0.1157 | |
| 22 | S | A | -0.1697 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | -0.1040 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.1557 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.7083 | |
| 31 | R | A | -2.5911 | |
| 32 | L | A | -0.7444 | |
| 33 | L | A | 1.2293 | |
| 34 | T | A | 1.4692 | |
| 35 | V | A | 2.0130 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2469 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6410 | |
| 40 | K | A | -1.8664 | |
| 41 | D | A | -0.7297 | |
| 42 | I | A | 1.2422 | |
| 43 | V | A | 2.1985 | |
| 44 | V | A | 1.6608 | |
| 45 | N | A | -0.5187 | |
| 46 | G | A | -0.3654 | |
| 47 | K | A | -0.1314 | |
| 48 | V | A | 2.2011 | |
| 49 | L | A | 2.5380 | |
| 50 | V | A | 1.4880 | |
| 51 | P | A | 0.3794 | |
| 52 | K | A | -0.6709 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1242 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4475 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2941 | |
| 70 | K | A | -1.8058 | |
| 71 | F | A | -0.6574 | |
| 72 | A | A | -0.5738 | |
| 73 | L | A | -0.8645 | |
| 74 | P | A | -1.2535 | |
| 75 | Q | A | -2.4746 | |
| 76 | K | A | -3.0922 | |
| 77 | D | A | -2.9867 | |
| 78 | F | A | -1.6303 | |
| 79 | Y | A | -1.9181 | |
| 80 | D | A | -2.7607 | |
| 81 | P | A | -2.3561 | |
| 82 | E | A | -3.0763 | |
| 83 | K | A | -3.4477 | |
| 84 | E | A | -2.5128 | |
| 85 | R | A | -1.3195 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6529 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9657 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3331 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.7407 | |
| 99 | G | A | -0.5325 | |
| 100 | P | A | -0.4169 | |
| 101 | L | A | 0.0138 | |
| 102 | G | A | -0.2726 | |
| 103 | K | A | -0.7304 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.4615 | |
| 106 | I | A | 0.0000 | |
| 107 | G | A | 0.1336 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.4302 | |
| 110 | L | A | 0.4001 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -0.9787 | |
| 113 | K | A | -0.1950 | |
| 114 | F | A | 0.0000 | |
| 115 | G | A | -1.2732 | |
| 116 | D | A | -1.7134 | |
| 117 | T | A | -1.2897 | |
| 118 | E | A | -2.6637 | |
| 119 | N | A | -2.4102 | |
| 120 | P | A | -1.8006 | |
| 121 | T | A | -1.0265 | |
| 122 | A | A | -0.5945 | |
| 123 | P | A | -0.7093 | |
| 124 | Q | A | -1.8185 | |
| 125 | H | A | -2.1815 | |
| 126 | E | A | -2.4617 | |
| 127 | T | A | -1.6326 | |
| 128 | A | A | -1.1762 | |
| 129 | D | A | -1.9354 | |
| 130 | V | A | -1.2751 | |
| 131 | R | A | -0.7023 | |
| 132 | V | A | 0.4488 | |
| 133 | A | A | 0.4638 | |
| 134 | F | A | 0.2769 | |
| 135 | S | A | -0.0713 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.7035 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5526 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2334 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1055 | |
| 157 | D | A | 0.3490 | |
| 158 | I | A | 0.8463 | |
| 159 | A | A | 0.1158 | |
| 160 | E | A | -1.4831 | |
| 161 | P | A | -0.2822 | |
| 162 | C | A | 0.1406 | |
| 163 | P | A | -0.2059 | |
| 164 | G | A | -0.1226 | |
| 165 | L | A | 0.4935 | |
| 166 | P | A | -0.1537 | |
| 167 | P | A | -0.3602 | |
| 168 | G | A | -0.4299 | |
| 169 | A | A | -0.0393 | |
| 170 | C | A | 0.7416 | |
| 171 | P | A | 0.5291 | |
| 172 | P | A | 0.7988 | |
| 173 | I | A | 2.0334 | |
| 174 | Q | A | 0.8264 | |
| 175 | L | A | 1.4219 | |
| 176 | V | A | 0.8071 | |
| 177 | N | A | -0.3109 | |
| 178 | S | A | 0.0275 | |
| 179 | V | A | 0.4428 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3769 | |
| 182 | D | A | 0.0737 | |
| 183 | G | A | -0.1605 | |
| 184 | D | A | -0.5604 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1307 | |
| 190 | F | A | 0.0602 | |
| 191 | G | A | -0.1033 | |
| 192 | N | A | -0.2798 | |
| 193 | M | A | -0.1502 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.4004 | |
| 197 | E | A | -2.6243 | |
| 198 | L | A | -1.2227 | |
| 199 | Q | A | -2.5435 | |
| 200 | Q | A | -3.3307 | |
| 201 | D | A | -3.5998 | |
| 202 | R | A | -3.3532 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.1713 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3840 | |
| 211 | S | A | -1.8962 | |
| 212 | T | A | -1.4683 | |
| 213 | R | A | -2.1388 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1707 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3235 | |
| 220 | L | A | 0.5458 | |
| 221 | K | A | -1.2213 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.9365 | |
| 224 | N | A | -1.6635 | |
| 225 | E | A | -1.2952 | |
| 226 | A | A | -0.6738 | |
| 227 | Y | A | -0.4571 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6967 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | -0.1272 | |
| 234 | F | A | -0.0031 | |
| 235 | G | A | -0.7836 | |
| 236 | R | A | -2.3391 | |
| 237 | R | A | -2.2809 | |
| 238 | E | A | -1.7576 | |
| 239 | Q | A | -0.0524 | |
| 240 | V | A | 1.4827 | |
| 241 | Y | A | 1.1878 | |
| 242 | A | A | 0.1310 | |
| 243 | R | A | -1.3876 | |
| 244 | H | A | -1.2371 | |
| 245 | F | A | -0.2607 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | 0.0000 | |
| 248 | R | A | -0.5321 | |
| 249 | A | A | -1.1038 | |
| 250 | G | A | -0.7733 | |
| 251 | P | A | -1.0442 | |
| 252 | D | A | -1.2118 | |
| 253 | G | A | -1.2249 | |
| 254 | H | A | -1.3592 | |
| 255 | P | A | -0.9575 | |
| 256 | L | A | -0.0999 | |
| 257 | P | A | -0.8864 | |
| 258 | D | A | -1.7371 | |
| 259 | A | A | 0.0000 | |
| 260 | P | A | -1.0392 | |
| 261 | P | A | -0.7136 | |
| 262 | P | A | -0.1881 | |
| 263 | S | A | -0.0424 | |
| 264 | P | A | 0.6665 | |
| 265 | L | A | 1.5397 | |
| 266 | Y | A | 1.0971 | |
| 267 | V | A | 0.9361 | |
| 268 | K | A | -0.8229 | |
| 269 | P | A | -0.1776 | |
| 270 | P | A | -0.3532 | |
| 271 | A | A | -0.2605 | |
| 272 | S | A | -0.1438 | |
| 273 | S | A | -0.0525 | |
| 274 | P | A | 0.1119 | |
| 275 | Y | A | 0.8944 | |
| 276 | A | A | 0.3142 | |
| 277 | T | A | 0.5352 | |
| 278 | L | A | 0.6641 | |
| 279 | P | A | -0.2051 | |
| 280 | S | A | 0.0000 | |
| 281 | Y | A | 0.1678 | |
| 282 | D | A | -0.4169 | |
| 283 | Y | A | 1.0693 | |
| 284 | F | A | 0.8015 | |
| 285 | G | A | 0.1124 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.7941 | |
| 291 | L | A | 1.5925 | |
| 292 | V | A | 0.5491 | |
| 293 | S | A | -0.1575 | |
| 294 | S | A | -0.9668 | |
| 295 | D | A | -1.8427 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.0183 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6560 | |
| 301 | R | A | -1.9034 | |
| 302 | P | A | -0.9592 | |
| 303 | F | A | -0.1966 | |
| 304 | W | A | -0.5045 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0783 | |
| 307 | R | A | -2.9221 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.7796 | |
| 310 | G | A | -1.4169 | |
| 311 | N | A | -1.3905 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.9029 | |
| 319 | N | A | -0.9852 | |
| 320 | E | A | -1.0519 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3605 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.1703 | |
| 333 | N | A | 0.4135 | |
| 334 | F | A | 1.4667 | |
| 335 | T | A | 0.7402 | |
| 336 | I | A | 0.3670 | |
| 337 | S | A | -0.9705 | |
| 338 | Q | A | -1.6310 | |
| 339 | Q | A | -1.2434 | |
| 340 | L | A | 0.3940 | |
| 341 | S | A | -0.0970 | |
| 342 | T | A | -0.5225 | |
| 343 | P | A | -1.0791 | |
| 344 | K | A | -1.6382 | |
| 345 | V | A | -0.1491 | |
| 346 | N | A | -0.3948 | |
| 347 | V | A | 1.4937 | |
| 348 | Y | A | 1.5217 | |
| 349 | D | A | -0.0210 | |
| 350 | P | A | -0.6023 | |
| 351 | A | A | -0.2812 | |
| 352 | N | A | -0.2684 | |
| 353 | F | A | -0.7888 | |
| 354 | K | A | -1.8574 | |
| 355 | N | A | -1.7737 | |
| 356 | Y | A | -0.1518 | |
| 357 | L | A | 0.5601 | |
| 358 | R | A | 0.9001 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.4841 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0106 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -1.9180 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6663 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3087 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3292 | |
| 376 | L | A | -1.7665 | |
| 377 | D | A | -2.0469 | |
| 378 | P | A | -1.0680 | |
| 379 | G | A | -1.0241 | |
| 380 | V | A | -0.9332 | |
| 381 | L | A | -0.5390 | |
| 382 | A | A | -0.6615 | |
| 383 | H | A | -0.8516 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4074 | |
| 386 | T | A | -0.5814 | |
| 387 | M | A | -0.3383 | |
| 388 | N | A | -0.8766 | |
| 389 | P | A | -1.2653 | |
| 390 | T | A | -1.5220 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.5141 | |
| 393 | E | A | -2.8982 | |
| 394 | N | A | -2.6156 | |
| 395 | W | A | -1.5016 | |
| 396 | N | A | -1.2130 | |
| 397 | L | A | -0.2753 | |
| 398 | G | A | 0.5047 | |
| 399 | F | A | 2.4119 | |
| 400 | V | A | 1.8453 | |
| 401 | P | A | 0.0519 | |
| 402 | P | A | -1.8660 | |
| 403 | K | A | -3.4147 | |
| 404 | E | A | -3.8973 | |
| 405 | R | A | -4.2004 | |
| 406 | E | A | -3.8924 | |
| 407 | D | A | -2.8984 | |
| 408 | P | A | -1.7766 | |
| 409 | Y | A | -0.9726 | |
| 410 | K | A | -2.0910 | |
| 411 | G | A | -0.6364 | |
| 412 | L | A | 0.6681 | |
| 413 | I | A | 1.5827 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3944 | |
| 416 | E | A | -1.6684 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.8514 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.9040 | |
| 421 | E | A | -2.5223 | |
| 422 | R | A | -2.1059 | |
| 423 | F | A | -1.0404 | |
| 424 | S | A | -1.3257 | |
| 425 | Q | A | -1.8447 | |
| 426 | D | A | -2.8815 | |
| 427 | L | A | -1.9698 | |
| 428 | D | A | -2.7504 | |
| 429 | Q | A | -2.5963 | |
| 430 | F | A | -1.4095 | |
| 431 | A | A | -0.8657 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.4947 | |
| 435 | K | A | -0.6707 | |
| 436 | F | A | 0.1913 | |
| 437 | L | A | 1.0630 | |
| 438 | Y | A | 0.8555 | |
| 439 | Q | A | -0.2552 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine