| Chain sequence(s) |
A: MSHHHHHHSGKVEEIKKILEELKKLKEVVEEAEEILKEVEEKGVDVVYAFGKIYRKFKDFAKTAKEKEVKELVKEILEILNKINNSWFFYEYYYGNKELVYKKVKDAVEEIKKKVEEEIKKYEEELKKAENS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:09:44)
[INFO] Main: Simulation completed successfully. (00:09:45)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.3127 | |
| 2 | S | A | -0.8605 | |
| 3 | H | A | -1.9690 | |
| 4 | H | A | -2.3695 | |
| 5 | H | A | -2.5720 | |
| 6 | H | A | -2.7502 | |
| 7 | H | A | -2.5050 | |
| 8 | H | A | -2.5000 | |
| 9 | S | A | -2.4304 | |
| 10 | G | A | -2.4347 | |
| 11 | K | A | -2.8772 | |
| 12 | V | A | -3.2688 | |
| 13 | E | A | -3.6658 | |
| 14 | E | A | -3.9918 | |
| 15 | I | A | 0.0000 | |
| 16 | K | A | -3.5911 | |
| 17 | K | A | -3.9252 | |
| 18 | I | A | 0.0000 | |
| 19 | L | A | 0.0000 | |
| 20 | E | A | -3.6215 | |
| 21 | E | A | 0.0000 | |
| 22 | L | A | 0.0000 | |
| 23 | K | A | -3.3776 | |
| 24 | K | A | -3.4978 | |
| 25 | L | A | 0.0000 | |
| 26 | K | A | -3.1715 | |
| 27 | E | A | -3.7568 | |
| 28 | V | A | -2.9117 | |
| 29 | V | A | 0.0000 | |
| 30 | E | A | -3.8022 | |
| 31 | E | A | -3.6750 | |
| 32 | A | A | 0.0000 | |
| 33 | E | A | -3.3384 | |
| 34 | E | A | -3.5122 | |
| 35 | I | A | -2.2664 | |
| 36 | L | A | 0.0000 | |
| 37 | K | A | -4.0684 | |
| 38 | E | A | -3.7631 | |
| 39 | V | A | 0.0000 | |
| 40 | E | A | -4.0158 | |
| 41 | E | A | -4.2330 | |
| 42 | K | A | -3.7925 | |
| 43 | G | A | -2.7192 | |
| 44 | V | A | -1.5805 | |
| 45 | D | A | -0.9355 | |
| 46 | V | A | 0.0000 | |
| 47 | V | A | 0.7011 | |
| 48 | Y | A | 0.9790 | |
| 49 | A | A | 0.0000 | |
| 50 | F | A | 0.0000 | |
| 51 | G | A | -0.5496 | |
| 52 | K | A | -1.3777 | |
| 53 | I | A | 0.0000 | |
| 54 | Y | A | -1.8445 | |
| 55 | R | A | -3.0932 | |
| 56 | K | A | -2.5245 | |
| 57 | F | A | 0.0000 | |
| 58 | K | A | -3.2674 | |
| 59 | D | A | -3.3620 | |
| 60 | F | A | -2.2352 | |
| 61 | A | A | -2.9554 | |
| 62 | K | A | -2.8696 | |
| 63 | T | A | -1.9293 | |
| 64 | A | A | 0.0000 | |
| 65 | K | A | -3.0993 | |
| 66 | E | A | -3.5509 | |
| 67 | K | A | -3.6063 | |
| 68 | E | A | -3.2909 | |
| 69 | V | A | 0.0000 | |
| 70 | K | A | -4.1041 | |
| 71 | E | A | -4.0565 | |
| 72 | L | A | 0.0000 | |
| 73 | V | A | 0.0000 | |
| 74 | K | A | -3.7395 | |
| 75 | E | A | -3.2312 | |
| 76 | I | A | 0.0000 | |
| 77 | L | A | 0.0000 | |
| 78 | E | A | -2.8451 | |
| 79 | I | A | -2.0750 | |
| 80 | L | A | 0.0000 | |
| 81 | N | A | -2.7191 | |
| 82 | K | A | -2.7516 | |
| 83 | I | A | -1.4524 | |
| 84 | N | A | -1.6732 | |
| 85 | N | A | -1.1737 | |
| 86 | S | A | 0.3644 | |
| 87 | W | A | 1.5533 | |
| 88 | F | A | 0.0000 | |
| 89 | F | A | 2.0801 | |
| 90 | Y | A | 2.2908 | |
| 91 | E | A | 1.1820 | |
| 92 | Y | A | 1.1390 | |
| 93 | Y | A | 2.3482 | |
| 94 | Y | A | 1.8209 | |
| 95 | G | A | -0.0861 | |
| 96 | N | A | -0.7799 | |
| 97 | K | A | -1.8233 | |
| 98 | E | A | -2.7588 | |
| 99 | L | A | -1.5198 | |
| 100 | V | A | 0.0000 | |
| 101 | Y | A | 0.0000 | |
| 102 | K | A | -3.1269 | |
| 103 | K | A | -2.5794 | |
| 104 | V | A | 0.0000 | |
| 105 | K | A | -3.1919 | |
| 106 | D | A | -3.8849 | |
| 107 | A | A | 0.0000 | |
| 108 | V | A | 0.0000 | |
| 109 | E | A | -4.0664 | |
| 110 | E | A | -3.8306 | |
| 111 | I | A | 0.0000 | |
| 112 | K | A | -3.5844 | |
| 113 | K | A | -3.8640 | |
| 114 | K | A | -3.3161 | |
| 115 | V | A | 0.0000 | |
| 116 | E | A | -3.4718 | |
| 117 | E | A | -4.1071 | |
| 118 | E | A | -3.3697 | |
| 119 | I | A | -3.4097 | |
| 120 | K | A | -4.2333 | |
| 121 | K | A | -4.1283 | |
| 122 | Y | A | 0.0000 | |
| 123 | E | A | -3.9299 | |
| 124 | E | A | -4.4390 | |
| 125 | E | A | -3.9082 | |
| 126 | L | A | -4.1598 | |
| 127 | K | A | -4.3698 | |
| 128 | K | A | -4.2614 | |
| 129 | A | A | 0.0000 | |
| 130 | E | A | -3.7373 | |
| 131 | N | A | -3.3181 | |
| 132 | S | A | -2.1697 |