| Chain sequence(s) |
C: DIQLTQSPASLAVSLGQRATISCKASQSVDYDGDSYLNWYQQIPGQPPKLLIYDASNLVSGIPPRFSGSGSGTDFTLNIHPVEKVDAATYHCQQSTEDPWTFGGGTKLEIKGGGGSGGGGSGGGGSQVQLQQSGAELVRPGSSVKISCKASGYAFSSYWMNWVKQRPGQGLEWIGQIWPGDGDTNYNGKFKGKATLTADESSSTAYMQLSSLASEDSAVYFCARRETTTVGRYYYAMDYWGQGTTVTVSS
input PDB |
| Selected Chain(s) | C |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with C chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:02)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 2 | D | C | -2.6974 | |
| 3 | I | C | 0.0000 | |
| 4 | Q | C | -2.2472 | |
| 5 | L | C | 0.0000 | |
| 6 | T | C | -1.4008 | |
| 7 | Q | C | -1.1516 | |
| 8 | S | C | -0.7401 | |
| 9 | P | C | -0.4635 | |
| 10 | A | C | -0.5281 | |
| 11 | S | C | -0.9170 | |
| 12 | L | C | -0.5405 | |
| 13 | A | C | -1.0410 | |
| 14 | V | C | -1.1297 | |
| 15 | S | C | -1.4380 | |
| 16 | L | C | -0.7945 | |
| 17 | G | C | -1.0588 | |
| 18 | Q | C | -1.9633 | |
| 19 | R | C | -2.4820 | |
| 20 | A | C | 0.0000 | |
| 21 | T | C | -0.7784 | |
| 22 | I | C | 0.0000 | |
| 23 | S | C | -0.9976 | |
| 24 | C | C | 0.0000 | |
| 25 | K | C | -2.9252 | |
| 26 | A | C | -2.1341 | |
| 27 | S | C | -2.0114 | |
| 28 | Q | C | -2.2672 | |
| 29 | S | C | -1.2948 | |
| 30 | V | C | 0.0000 | |
| 31 | D | C | -0.8727 | |
| 32 | Y | C | -0.2015 | |
| 33 | D | C | -1.6687 | |
| 34 | G | C | -1.2965 | |
| 35 | D | C | -0.9336 | |
| 36 | S | C | 0.0000 | |
| 37 | Y | C | 0.0792 | |
| 38 | L | C | 0.0000 | |
| 39 | N | C | 0.0000 | |
| 40 | W | C | 0.0000 | |
| 41 | Y | C | 0.0000 | |
| 42 | Q | C | 0.0000 | |
| 43 | Q | C | -0.5762 | |
| 44 | I | C | -0.3932 | |
| 45 | P | C | -0.6389 | |
| 46 | G | C | -1.1505 | |
| 47 | Q | C | -1.6072 | |
| 48 | P | C | -0.9308 | |
| 49 | P | C | 0.0000 | |
| 50 | K | C | -0.5666 | |
| 51 | L | C | 0.0000 | |
| 52 | L | C | 0.0000 | |
| 53 | I | C | 0.0000 | |
| 54 | Y | C | 0.4400 | |
| 55 | D | C | 0.0000 | |
| 56 | A | C | 0.0000 | |
| 57 | S | C | -0.5773 | |
| 58 | N | C | -0.5769 | |
| 59 | L | C | 0.1713 | |
| 60 | V | C | 0.1779 | |
| 61 | S | C | -0.3365 | |
| 62 | G | C | -0.7168 | |
| 63 | I | C | -0.1641 | |
| 64 | P | C | -0.2958 | |
| 65 | P | C | -0.4034 | |
| 66 | R | C | -0.9384 | |
| 67 | F | C | 0.0000 | |
| 68 | S | C | -0.5287 | |
| 69 | G | C | -0.4776 | |
| 70 | S | C | -0.8939 | |
| 71 | G | C | -1.3715 | |
| 72 | S | C | -1.0472 | |
| 73 | G | C | -1.4730 | |
| 74 | T | C | -2.1004 | |
| 75 | D | C | -2.8398 | |
| 76 | F | C | 0.0000 | |
| 77 | T | C | -0.9646 | |
| 78 | L | C | 0.0000 | |
| 79 | N | C | -0.9113 | |
| 80 | I | C | 0.0000 | |
| 81 | H | C | -1.8343 | |
| 82 | P | C | -1.4809 | |
| 83 | V | C | 0.0000 | |
| 84 | E | C | -1.6657 | |
| 85 | K | C | -2.5538 | |
| 86 | V | C | -1.3052 | |
| 87 | D | C | 0.0000 | |
| 88 | A | C | -1.3704 | |
| 89 | A | C | 0.0000 | |
| 90 | T | C | -0.8235 | |
| 91 | Y | C | 0.0000 | |
| 92 | H | C | 0.0000 | |
| 93 | C | C | 0.0000 | |
| 94 | Q | C | 0.0000 | |
| 95 | Q | C | 0.0000 | |
| 96 | S | C | 0.0000 | |
| 97 | T | C | -0.7697 | |
| 98 | E | C | -2.0066 | |
| 99 | D | C | -2.1091 | |
| 100 | P | C | -1.8301 | |
| 101 | W | C | 0.0000 | |
| 102 | T | C | -1.1033 | |
| 103 | F | C | 0.0000 | |
| 104 | G | C | 0.0000 | |
| 105 | G | C | -1.1523 | |
| 106 | G | C | -0.9325 | |
| 107 | T | C | 0.0000 | |
| 108 | K | C | -1.7178 | |
| 109 | L | C | 0.0000 | |
| 110 | E | C | -2.3504 | |
| 111 | I | C | 0.0000 | |
| 112 | K | C | -2.4565 | |
| 113 | G | C | -1.8100 | |
| 114 | G | C | -1.5770 | |
| 115 | G | C | -2.0283 | |
| 116 | G | C | -1.9567 | |
| 117 | S | C | -1.2266 | |
| 118 | G | C | -1.2496 | |
| 119 | G | C | -1.4383 | |
| 120 | G | C | -1.3085 | |
| 121 | G | C | -1.3266 | |
| 122 | S | C | -0.8233 | |
| 123 | G | C | -1.1315 | |
| 124 | G | C | -1.1180 | |
| 125 | G | C | -1.2480 | |
| 126 | G | C | -1.4002 | |
| 127 | S | C | -1.3106 | |
| 128 | Q | C | -1.8144 | |
| 129 | V | C | -1.2952 | |
| 130 | Q | C | -2.1672 | |
| 131 | L | C | 0.0000 | |
| 132 | Q | C | -2.3248 | |
| 133 | Q | C | 0.0000 | |
| 134 | S | C | -1.2152 | |
| 135 | G | C | -0.9259 | |
| 136 | A | C | -0.2305 | |
| 137 | E | C | -0.3447 | |
| 138 | L | C | 0.8092 | |
| 139 | V | C | -0.3240 | |
| 140 | R | C | -1.8332 | |
| 141 | P | C | -1.5163 | |
| 142 | G | C | -1.1858 | |
| 143 | S | C | -0.9991 | |
| 144 | S | C | -1.1825 | |
| 145 | V | C | 0.0000 | |
| 146 | K | C | -1.9796 | |
| 147 | I | C | 0.0000 | |
| 148 | S | C | -1.0933 | |
| 149 | C | C | 0.0000 | |
| 150 | K | C | -2.3929 | |
| 151 | A | C | 0.0000 | |
| 152 | S | C | -1.3598 | |
| 153 | G | C | -1.0788 | |
| 154 | Y | C | -0.5159 | |
| 155 | A | C | -0.2147 | |
| 156 | F | C | 0.0000 | |
| 157 | S | C | -1.0466 | |
| 158 | S | C | -0.6300 | |
| 159 | Y | C | 0.0000 | |
| 160 | W | C | -0.0471 | |
| 161 | M | C | 0.0000 | |
| 162 | N | C | 0.0000 | |
| 163 | W | C | 0.0000 | |
| 164 | V | C | 0.0000 | |
| 165 | K | C | 0.0000 | |
| 166 | Q | C | -0.9997 | |
| 167 | R | C | -1.6711 | |
| 168 | P | C | -1.1606 | |
| 169 | G | C | -1.3972 | |
| 170 | Q | C | -1.9990 | |
| 171 | G | C | -1.3412 | |
| 172 | L | C | 0.0000 | |
| 173 | E | C | -1.0024 | |
| 174 | W | C | 0.0000 | |
| 175 | I | C | 0.0000 | |
| 176 | G | C | 0.0000 | |
| 177 | Q | C | 0.0000 | |
| 178 | I | C | 0.0000 | |
| 179 | W | C | -0.7464 | |
| 180 | P | C | 0.0000 | |
| 181 | G | C | -1.9121 | |
| 182 | D | C | -2.7973 | |
| 183 | G | C | -2.1469 | |
| 184 | D | C | -2.4249 | |
| 185 | T | C | -1.2305 | |
| 186 | N | C | -1.2037 | |
| 187 | Y | C | -1.2143 | |
| 188 | N | C | 0.0000 | |
| 189 | G | C | -2.3529 | |
| 190 | K | C | -2.5374 | |
| 191 | F | C | 0.0000 | |
| 192 | K | C | -2.7506 | |
| 193 | G | C | -1.8376 | |
| 194 | K | C | -1.7160 | |
| 195 | A | C | 0.0000 | |
| 196 | T | C | -0.9088 | |
| 197 | L | C | 0.0000 | |
| 198 | T | C | -0.7988 | |
| 199 | A | C | -1.4388 | |
| 200 | D | C | -2.0413 | |
| 201 | E | C | -2.6215 | |
| 202 | S | C | -1.3450 | |
| 203 | S | C | -1.2893 | |
| 204 | S | C | -1.4810 | |
| 205 | T | C | 0.0000 | |
| 206 | A | C | 0.0000 | |
| 207 | Y | C | -0.6007 | |
| 208 | M | C | 0.0000 | |
| 209 | Q | C | -1.3282 | |
| 210 | L | C | 0.0000 | |
| 211 | S | C | -0.9618 | |
| 212 | S | C | -0.8486 | |
| 213 | L | C | 0.0000 | |
| 214 | A | C | -1.2912 | |
| 215 | S | C | -1.4796 | |
| 216 | E | C | -2.0491 | |
| 217 | D | C | 0.0000 | |
| 218 | S | C | -0.7262 | |
| 219 | A | C | 0.0000 | |
| 220 | V | C | -0.0413 | |
| 221 | Y | C | 0.0000 | |
| 222 | F | C | 0.0000 | |
| 223 | C | C | 0.0000 | |
| 224 | A | C | 0.0000 | |
| 225 | R | C | 0.0000 | |
| 226 | R | C | 0.0000 | |
| 227 | E | C | -0.7284 | |
| 228 | T | C | -0.2555 | |
| 229 | T | C | 0.2944 | |
| 230 | T | C | 0.8342 | |
| 231 | V | C | 1.8264 | |
| 232 | G | C | 0.9688 | |
| 233 | R | C | 0.2968 | |
| 234 | Y | C | 1.0318 | |
| 235 | Y | C | 0.7603 | |
| 236 | Y | C | 0.5826 | |
| 237 | A | C | 0.0000 | |
| 238 | M | C | 0.0000 | |
| 239 | D | C | -0.4453 | |
| 240 | Y | C | -0.4040 | |
| 241 | W | C | -0.5962 | |
| 242 | G | C | 0.0000 | |
| 243 | Q | C | -1.5487 | |
| 244 | G | C | -0.8490 | |
| 245 | T | C | 0.0000 | |
| 246 | T | C | -0.1714 | |
| 247 | V | C | 0.0000 | |
| 248 | T | C | -0.1583 | |
| 249 | V | C | 0.0000 | |
| 250 | S | C | -0.6199 | |
| 251 | S | C | -0.7154 |