| Chain sequence(s) |
A: MGSSHHHHHHYYLEVDNKFNKEFQWAWQEILVLPNLNKYQKEAFKTSLKDDPSQSANLLAEAKKLNDAQAPKVD
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:42)
[INFO] Main: Simulation completed successfully. (00:02:43)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.7709 | |
| 2 | G | A | -0.1925 | |
| 3 | S | A | -0.7030 | |
| 4 | S | A | -1.3032 | |
| 5 | H | A | -2.0404 | |
| 6 | H | A | -2.4520 | |
| 7 | H | A | -2.6022 | |
| 8 | H | A | -2.4294 | |
| 9 | H | A | -1.8283 | |
| 10 | H | A | -0.8391 | |
| 11 | Y | A | 1.2037 | |
| 12 | Y | A | 2.0781 | |
| 13 | L | A | 1.6559 | |
| 14 | E | A | -0.7998 | |
| 15 | V | A | -0.0487 | |
| 16 | D | A | -2.3249 | |
| 17 | N | A | -2.5443 | |
| 18 | K | A | -2.5097 | |
| 19 | F | A | -0.4464 | |
| 20 | N | A | -1.6425 | |
| 21 | K | A | -2.6844 | |
| 22 | E | A | -1.8950 | |
| 23 | F | A | -1.2463 | |
| 24 | Q | A | -0.7475 | |
| 25 | W | A | -0.3416 | |
| 26 | A | A | 0.0000 | |
| 27 | W | A | -0.3629 | |
| 28 | Q | A | 0.2416 | |
| 29 | E | A | 0.2084 | |
| 30 | I | A | 0.0000 | |
| 31 | L | A | 0.6620 | |
| 32 | V | A | 1.4981 | |
| 33 | L | A | 0.0000 | |
| 34 | P | A | -0.4739 | |
| 35 | N | A | -1.2584 | |
| 36 | L | A | 0.0000 | |
| 37 | N | A | -1.6316 | |
| 38 | K | A | -1.9630 | |
| 39 | Y | A | -0.5705 | |
| 40 | Q | A | -0.9909 | |
| 41 | K | A | -1.3231 | |
| 42 | E | A | -1.9221 | |
| 43 | A | A | -1.2161 | |
| 44 | F | A | 0.0000 | |
| 45 | K | A | -1.6018 | |
| 46 | T | A | -1.9738 | |
| 47 | S | A | -1.9848 | |
| 48 | L | A | 0.0000 | |
| 49 | K | A | -3.0202 | |
| 50 | D | A | -3.2115 | |
| 51 | D | A | -2.4245 | |
| 52 | P | A | -1.6884 | |
| 53 | S | A | -1.1342 | |
| 54 | Q | A | -1.8310 | |
| 55 | S | A | 0.0000 | |
| 56 | A | A | -1.0967 | |
| 57 | N | A | -1.9306 | |
| 58 | L | A | -1.6445 | |
| 59 | L | A | 0.0000 | |
| 60 | A | A | -1.9768 | |
| 61 | E | A | -3.0328 | |
| 62 | A | A | 0.0000 | |
| 63 | K | A | -2.9723 | |
| 64 | K | A | -3.2969 | |
| 65 | L | A | -2.0658 | |
| 66 | N | A | 0.0000 | |
| 67 | D | A | -3.2032 | |
| 68 | A | A | -1.9049 | |
| 69 | Q | A | -1.9822 | |
| 70 | A | A | -1.5257 | |
| 71 | P | A | -1.2672 | |
| 72 | K | A | -1.7970 | |
| 73 | V | A | 0.0035 | |
| 74 | D | A | -1.5097 |