| Chain sequence(s) |
A: MGSSHHHHHHSSGKPHIDNYLHEKDKEDKIEQYDKEQKAQAAKDPKMKKKPEIPKDKSKVAGYIEIPDANIKEPVYPGPATREQLNRGVSFAEADESLEDQNISIAGHTFIDRPNYQFTNLKAAKKGSKVYFKVGDEVREYKMTSIRNVKPTAVEVLDEQEGKDKQLTLITCDDYNEETGVWETRKIFVATEVKAE
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:07:09)
[INFO] Main: Simulation completed successfully. (00:07:10)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.7468 | |
| 2 | G | A | -0.2546 | |
| 3 | S | A | -0.6932 | |
| 4 | S | A | -1.2231 | |
| 5 | H | A | -2.1289 | |
| 6 | H | A | -2.4861 | |
| 7 | H | A | -2.7278 | |
| 8 | H | A | -2.7218 | |
| 9 | H | A | -2.5070 | |
| 10 | H | A | -2.1569 | |
| 11 | S | A | -1.6330 | |
| 12 | S | A | -1.5042 | |
| 13 | G | A | -1.7994 | |
| 14 | K | A | -2.2973 | |
| 15 | P | A | -2.0196 | |
| 16 | H | A | -1.3050 | |
| 17 | I | A | -0.0794 | |
| 18 | D | A | -1.6391 | |
| 19 | N | A | -1.3211 | |
| 20 | Y | A | 0.0854 | |
| 21 | L | A | -0.2843 | |
| 22 | H | A | -1.7337 | |
| 23 | E | A | -2.3611 | |
| 24 | K | A | -3.2472 | |
| 25 | D | A | -3.8154 | |
| 26 | K | A | -3.5584 | |
| 27 | E | A | -4.3337 | |
| 28 | D | A | -4.9071 | |
| 29 | K | A | -4.2230 | |
| 30 | I | A | 0.0000 | |
| 31 | E | A | -4.5902 | |
| 32 | Q | A | -4.2522 | |
| 33 | Y | A | 0.0000 | |
| 34 | D | A | -3.9653 | |
| 35 | K | A | -4.4582 | |
| 36 | E | A | -4.3890 | |
| 37 | Q | A | -3.8809 | |
| 38 | K | A | -4.0964 | |
| 39 | A | A | -3.0463 | |
| 40 | Q | A | -3.7219 | |
| 41 | A | A | -3.1671 | |
| 42 | A | A | -2.1251 | |
| 43 | K | A | -2.6845 | |
| 44 | D | A | -2.4151 | |
| 45 | P | A | -2.1601 | |
| 46 | K | A | -2.3509 | |
| 47 | M | A | -1.9705 | |
| 48 | K | A | -3.4946 | |
| 49 | K | A | -3.8191 | |
| 50 | K | A | -3.8378 | |
| 51 | P | A | -3.1483 | |
| 52 | E | A | -2.8821 | |
| 53 | I | A | -1.7816 | |
| 54 | P | A | -2.1699 | |
| 55 | K | A | -2.9099 | |
| 56 | D | A | -2.7386 | |
| 57 | K | A | -2.7395 | |
| 58 | S | A | -2.2985 | |
| 59 | K | A | -2.6952 | |
| 60 | V | A | -1.2824 | |
| 61 | A | A | 0.0000 | |
| 62 | G | A | 0.0000 | |
| 63 | Y | A | 0.0000 | |
| 64 | I | A | 0.0000 | |
| 65 | E | A | -1.5860 | |
| 66 | I | A | 0.0000 | |
| 67 | P | A | -1.9742 | |
| 68 | D | A | -3.0368 | |
| 69 | A | A | 0.0000 | |
| 70 | N | A | -2.4404 | |
| 71 | I | A | 0.0000 | |
| 72 | K | A | -1.7539 | |
| 73 | E | A | 0.0000 | |
| 74 | P | A | 0.0000 | |
| 75 | V | A | 0.0000 | |
| 76 | Y | A | 0.0000 | |
| 77 | P | A | 0.0000 | |
| 78 | G | A | 0.0000 | |
| 79 | P | A | -1.5787 | |
| 80 | A | A | -1.2075 | |
| 81 | T | A | -1.7316 | |
| 82 | R | A | -2.9045 | |
| 83 | E | A | -3.3561 | |
| 84 | Q | A | 0.0000 | |
| 85 | L | A | 0.0000 | |
| 86 | N | A | -2.8371 | |
| 87 | R | A | -2.6270 | |
| 88 | G | A | 0.0000 | |
| 89 | V | A | 0.0000 | |
| 90 | S | A | 0.0000 | |
| 91 | F | A | 0.0000 | |
| 92 | A | A | -1.0016 | |
| 93 | E | A | -2.1800 | |
| 94 | A | A | -1.9285 | |
| 95 | D | A | -2.3422 | |
| 96 | E | A | -1.8846 | |
| 97 | S | A | -1.8467 | |
| 98 | L | A | 0.0000 | |
| 99 | E | A | -2.6729 | |
| 100 | D | A | -2.4027 | |
| 101 | Q | A | 0.0000 | |
| 102 | N | A | 0.0000 | |
| 103 | I | A | 0.0000 | |
| 104 | S | A | 0.0000 | |
| 105 | I | A | 0.0000 | |
| 106 | A | A | 0.0000 | |
| 107 | G | A | 0.0000 | |
| 108 | H | A | 0.0000 | |
| 109 | T | A | -0.1443 | |
| 110 | F | A | 0.7554 | |
| 111 | I | A | 0.9977 | |
| 112 | D | A | -0.9896 | |
| 113 | R | A | -1.3138 | |
| 114 | P | A | -0.9135 | |
| 115 | N | A | -1.4394 | |
| 116 | Y | A | -0.5648 | |
| 117 | Q | A | 0.0000 | |
| 118 | F | A | 0.0000 | |
| 119 | T | A | 0.0000 | |
| 120 | N | A | -1.2780 | |
| 121 | L | A | 0.0000 | |
| 122 | K | A | -2.2735 | |
| 123 | A | A | -1.9594 | |
| 124 | A | A | 0.0000 | |
| 125 | K | A | -3.3095 | |
| 126 | K | A | -2.8174 | |
| 127 | G | A | -2.3062 | |
| 128 | S | A | 0.0000 | |
| 129 | K | A | -2.2376 | |
| 130 | V | A | 0.0000 | |
| 131 | Y | A | -0.3646 | |
| 132 | F | A | 0.0000 | |
| 133 | K | A | -0.4425 | |
| 134 | V | A | 0.0000 | |
| 135 | G | A | -2.8210 | |
| 136 | D | A | -3.4035 | |
| 137 | E | A | -1.7446 | |
| 138 | V | A | 0.4868 | |
| 139 | R | A | -0.3301 | |
| 140 | E | A | -1.1917 | |
| 141 | Y | A | 0.0000 | |
| 142 | K | A | -2.0143 | |
| 143 | M | A | 0.0000 | |
| 144 | T | A | -1.1697 | |
| 145 | S | A | -0.8166 | |
| 146 | I | A | -1.1391 | |
| 147 | R | A | -1.9578 | |
| 148 | N | A | -2.5001 | |
| 149 | V | A | 0.0000 | |
| 150 | K | A | -2.1878 | |
| 151 | P | A | -1.1462 | |
| 152 | T | A | -0.4371 | |
| 153 | A | A | -0.2441 | |
| 154 | V | A | 0.4310 | |
| 155 | E | A | -1.6383 | |
| 156 | V | A | -0.8076 | |
| 157 | L | A | -1.3617 | |
| 158 | D | A | -3.1636 | |
| 159 | E | A | -4.0858 | |
| 160 | Q | A | -3.7704 | |
| 161 | E | A | -3.8901 | |
| 162 | G | A | -3.0279 | |
| 163 | K | A | -4.0163 | |
| 164 | D | A | -3.8280 | |
| 165 | K | A | -3.4844 | |
| 166 | Q | A | -1.8966 | |
| 167 | L | A | 0.0000 | |
| 168 | T | A | 0.0000 | |
| 169 | L | A | 0.0000 | |
| 170 | I | A | 0.0000 | |
| 171 | T | A | 0.0000 | |
| 172 | C | A | -0.8534 | |
| 173 | D | A | -1.6831 | |
| 174 | D | A | -2.3935 | |
| 175 | Y | A | -1.8657 | |
| 176 | N | A | -2.3196 | |
| 177 | E | A | -2.8842 | |
| 178 | E | A | -2.7126 | |
| 179 | T | A | -1.5225 | |
| 180 | G | A | -1.3628 | |
| 181 | V | A | -0.5094 | |
| 182 | W | A | -1.4414 | |
| 183 | E | A | -2.4896 | |
| 184 | T | A | -2.2898 | |
| 185 | R | A | 0.0000 | |
| 186 | K | A | -2.0812 | |
| 187 | I | A | 0.0000 | |
| 188 | F | A | 0.0000 | |
| 189 | V | A | -0.2405 | |
| 190 | A | A | 0.0000 | |
| 191 | T | A | -1.7751 | |
| 192 | E | A | -2.0029 | |
| 193 | V | A | -1.6245 | |
| 194 | K | A | -2.4426 | |
| 195 | A | A | -1.6359 | |
| 196 | E | A | -2.1521 |