| Chain sequence(s) |
B: SAELREMIERMERAIAIAKRFAAEHPELAPLLAEAAAKYAALKERLEKTM
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:12)
[INFO] Main: Simulation completed successfully. (00:01:12)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | B | -1.1670 | |
| 2 | A | B | -1.7896 | |
| 3 | E | B | -2.8589 | |
| 4 | L | B | -2.3209 | |
| 5 | R | B | -3.5213 | |
| 6 | E | B | -3.7520 | |
| 7 | M | B | -2.7088 | |
| 8 | I | B | 0.0000 | |
| 9 | E | B | -4.2835 | |
| 10 | R | B | -3.9761 | |
| 11 | M | B | -2.4539 | |
| 12 | E | B | -3.2578 | |
| 13 | R | B | -3.0778 | |
| 14 | A | B | -1.7049 | |
| 15 | I | B | -1.3682 | |
| 16 | A | B | -1.2242 | |
| 17 | I | B | 0.1616 | |
| 18 | A | B | 0.0000 | |
| 19 | K | B | -1.8103 | |
| 20 | R | B | -1.8154 | |
| 21 | F | B | -0.1466 | |
| 22 | A | B | -0.8538 | |
| 23 | A | B | -1.5466 | |
| 24 | E | B | -2.3674 | |
| 25 | H | B | -1.8386 | |
| 26 | P | B | -1.1879 | |
| 27 | E | B | -1.7745 | |
| 28 | L | B | -0.2442 | |
| 29 | A | B | -0.7344 | |
| 30 | P | B | -0.1523 | |
| 31 | L | B | 0.8442 | |
| 32 | L | B | -0.0557 | |
| 33 | A | B | -0.5737 | |
| 34 | E | B | -1.6945 | |
| 35 | A | B | -1.0005 | |
| 36 | A | B | 0.0000 | |
| 37 | A | B | -0.8984 | |
| 38 | K | B | -1.7640 | |
| 39 | Y | B | -1.1602 | |
| 40 | A | B | -1.2261 | |
| 41 | A | B | -1.2839 | |
| 42 | L | B | -1.1569 | |
| 43 | K | B | -2.6016 | |
| 44 | E | B | -3.3853 | |
| 45 | R | B | -3.1648 | |
| 46 | L | B | -2.1307 | |
| 47 | E | B | -2.9573 | |
| 48 | K | B | -2.9048 | |
| 49 | T | B | -1.3320 | |
| 50 | M | B | -0.3116 |