| Chain sequence(s) |
A: AALAAYKTALAAVRTAAAAFLAAVRADLGDSPEVRELEALAARLDAATDALVAALDAKRWAEALALAAEVDKLVAQQVALMDRIVGSLSAAAQAAYAALLTARAATAAAAAALRAAIAAQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:28)
[INFO] Main: Simulation completed successfully. (00:01:29)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | 0.0745 | |
| 2 | A | A | -0.1122 | |
| 3 | L | A | -0.1975 | |
| 4 | A | A | -0.1331 | |
| 5 | A | A | -0.1715 | |
| 6 | Y | A | 0.0000 | |
| 7 | K | A | -1.1219 | |
| 8 | T | A | -0.4692 | |
| 9 | A | A | -0.3455 | |
| 10 | L | A | 0.0000 | |
| 11 | A | A | -0.4012 | |
| 12 | A | A | -0.2503 | |
| 13 | V | A | -0.1392 | |
| 14 | R | A | -0.6747 | |
| 15 | T | A | -0.2334 | |
| 16 | A | A | 0.0415 | |
| 17 | A | A | -0.0322 | |
| 18 | A | A | -0.0489 | |
| 19 | A | A | 0.1283 | |
| 20 | F | A | 0.0000 | |
| 21 | L | A | -0.2515 | |
| 22 | A | A | -0.1841 | |
| 23 | A | A | -0.2588 | |
| 24 | V | A | 0.0000 | |
| 25 | R | A | -1.5217 | |
| 26 | A | A | -0.7644 | |
| 27 | D | A | -1.0693 | |
| 28 | L | A | -0.9097 | |
| 29 | G | A | -1.6552 | |
| 30 | D | A | -2.6269 | |
| 31 | S | A | -2.1329 | |
| 32 | P | A | -2.1754 | |
| 33 | E | A | -2.6406 | |
| 34 | V | A | 0.0000 | |
| 35 | R | A | -3.7587 | |
| 36 | E | A | -3.3040 | |
| 37 | L | A | 0.0000 | |
| 38 | E | A | -2.2159 | |
| 39 | A | A | -2.0234 | |
| 40 | L | A | 0.0000 | |
| 41 | A | A | -1.3656 | |
| 42 | A | A | -1.4173 | |
| 43 | R | A | -2.2287 | |
| 44 | L | A | -1.8991 | |
| 45 | D | A | -1.9568 | |
| 46 | A | A | -1.5001 | |
| 47 | A | A | 0.0000 | |
| 48 | T | A | 0.0000 | |
| 49 | D | A | -2.1635 | |
| 50 | A | A | -1.2074 | |
| 51 | L | A | 0.0000 | |
| 52 | V | A | -1.0772 | |
| 53 | A | A | -1.5821 | |
| 54 | A | A | 0.0000 | |
| 55 | L | A | 0.0000 | |
| 56 | D | A | -2.4551 | |
| 57 | A | A | -2.1728 | |
| 58 | K | A | -3.3235 | |
| 59 | R | A | -3.2616 | |
| 60 | W | A | -2.0001 | |
| 61 | A | A | -1.1548 | |
| 62 | E | A | -2.1882 | |
| 63 | A | A | 0.0000 | |
| 64 | L | A | -0.4386 | |
| 65 | A | A | -0.5580 | |
| 66 | L | A | -0.9433 | |
| 67 | A | A | -1.0579 | |
| 68 | A | A | -1.4503 | |
| 69 | E | A | -2.1903 | |
| 70 | V | A | -1.8997 | |
| 71 | D | A | -2.7864 | |
| 72 | K | A | -2.8366 | |
| 73 | L | A | -1.7881 | |
| 74 | V | A | -1.0602 | |
| 75 | A | A | -1.0277 | |
| 76 | Q | A | -1.5177 | |
| 77 | Q | A | 0.0000 | |
| 78 | V | A | 0.1249 | |
| 79 | A | A | -0.7071 | |
| 80 | L | A | -1.2347 | |
| 81 | M | A | 0.0000 | |
| 82 | D | A | -2.3890 | |
| 83 | R | A | -2.5917 | |
| 84 | I | A | 0.0000 | |
| 85 | V | A | -0.7743 | |
| 86 | G | A | -1.0565 | |
| 87 | S | A | -0.6941 | |
| 88 | L | A | 0.0000 | |
| 89 | S | A | -0.3720 | |
| 90 | A | A | -0.1490 | |
| 91 | A | A | -0.1635 | |
| 92 | A | A | 0.0000 | |
| 93 | Q | A | -0.4259 | |
| 94 | A | A | -0.0298 | |
| 95 | A | A | 0.1350 | |
| 96 | Y | A | 0.3246 | |
| 97 | A | A | 0.2431 | |
| 98 | A | A | 0.2728 | |
| 99 | L | A | 0.0000 | |
| 100 | L | A | 0.8323 | |
| 101 | T | A | 0.3196 | |
| 102 | A | A | 0.1542 | |
| 103 | R | A | 0.0922 | |
| 104 | A | A | 0.1885 | |
| 105 | A | A | 0.1527 | |
| 106 | T | A | -0.0260 | |
| 107 | A | A | -0.1260 | |
| 108 | A | A | 0.1224 | |
| 109 | A | A | -0.2383 | |
| 110 | A | A | -0.3877 | |
| 111 | A | A | -0.4365 | |
| 112 | A | A | -0.3386 | |
| 113 | L | A | 0.0000 | |
| 114 | R | A | -1.3790 | |
| 115 | A | A | -0.7722 | |
| 116 | A | A | -0.5521 | |
| 117 | I | A | -0.9461 | |
| 118 | A | A | -0.5657 | |
| 119 | A | A | -0.6436 | |
| 120 | Q | A | -1.2137 |