| Chain sequence(s) |
H: QVQLVESGGGLVQAGGSLRLSCAASGRTFPTYGIGWFRQAPGKEREFVAAINWSGAMTRYADSVKGRLTISRDNAKNTVYLQMNSLKPEDTAVYYCAAAVTAVIASNYDYWGQGTQVAVSS
input PDB |
| Selected Chain(s) | H |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with H chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:56)
[INFO] Main: Simulation completed successfully. (00:00:57)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.8676 | |
| 2 | V | H | 0.0000 | |
| 3 | Q | H | -0.9936 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 1.2778 | |
| 6 | E | H | 0.1965 | |
| 7 | S | H | -0.4885 | |
| 8 | G | H | -1.0408 | |
| 9 | G | H | -0.6707 | |
| 11 | G | H | 0.0061 | |
| 12 | L | H | 1.0795 | |
| 13 | V | H | 0.0207 | |
| 14 | Q | H | -1.2672 | |
| 15 | A | H | -1.5643 | |
| 16 | G | H | -1.5151 | |
| 17 | G | H | -1.0509 | |
| 18 | S | H | -1.3093 | |
| 19 | L | H | -0.7017 | |
| 20 | R | H | -1.4686 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.1973 | |
| 23 | C | H | 0.0000 | |
| 24 | A | H | -0.0827 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -1.2583 | |
| 27 | G | H | -1.8716 | |
| 28 | R | H | -2.4355 | |
| 29 | T | H | -1.0794 | |
| 30 | F | H | 0.0000 | |
| 35 | P | H | -0.6502 | |
| 36 | T | H | 0.0726 | |
| 37 | Y | H | 0.0000 | |
| 38 | G | H | 0.0000 | |
| 39 | I | H | 0.0000 | |
| 40 | G | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | F | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -1.6422 | |
| 45 | A | H | -1.6218 | |
| 46 | P | H | -1.2379 | |
| 47 | G | H | -1.7494 | |
| 48 | K | H | -2.8522 | |
| 49 | E | H | -3.1562 | |
| 50 | R | H | -2.2523 | |
| 51 | E | H | -1.3878 | |
| 52 | F | H | -0.5105 | |
| 53 | V | H | 0.0000 | |
| 54 | A | H | 0.0000 | |
| 55 | A | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | N | H | 0.0000 | |
| 58 | W | H | 0.3215 | |
| 59 | S | H | -0.1807 | |
| 62 | G | H | -0.2901 | |
| 63 | A | H | -0.0884 | |
| 64 | M | H | -0.0536 | |
| 65 | T | H | -0.6256 | |
| 66 | R | H | -1.8555 | |
| 67 | Y | H | -1.5186 | |
| 68 | A | H | -1.4676 | |
| 69 | D | H | -2.5634 | |
| 70 | S | H | -1.7349 | |
| 71 | V | H | 0.0000 | |
| 72 | K | H | -2.6346 | |
| 74 | G | H | -1.7993 | |
| 75 | R | H | -1.9618 | |
| 76 | L | H | 0.0000 | |
| 77 | T | H | -1.0471 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.3705 | |
| 80 | R | H | -0.9955 | |
| 81 | D | H | -1.8262 | |
| 82 | N | H | -1.6679 | |
| 83 | A | H | -1.4394 | |
| 84 | K | H | -2.3907 | |
| 85 | N | H | -1.8923 | |
| 86 | T | H | -0.9959 | |
| 87 | V | H | 0.0000 | |
| 88 | Y | H | -0.3678 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -1.1091 | |
| 91 | M | H | 0.0000 | |
| 92 | N | H | -2.0411 | |
| 93 | S | H | -1.6208 | |
| 94 | L | H | 0.0000 | |
| 95 | K | H | -2.5868 | |
| 96 | P | H | -1.9090 | |
| 97 | E | H | -2.3384 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.8830 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | -0.4347 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | -0.0711 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | A | H | 0.0000 | |
| 107 | A | H | 0.0000 | |
| 108 | V | H | 1.0374 | |
| 109 | T | H | 0.7917 | |
| 110 | A | H | 1.0703 | |
| 111 | V | H | 1.0603 | |
| 112A | I | H | 1.9126 | |
| 112 | A | H | 0.6570 | |
| 113 | S | H | -0.4076 | |
| 114 | N | H | -1.0988 | |
| 115 | Y | H | 0.0000 | |
| 116 | D | H | -1.2393 | |
| 117 | Y | H | -0.5525 | |
| 118 | W | H | 0.0853 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -0.8934 | |
| 121 | G | H | -0.4843 | |
| 122 | T | H | -0.7113 | |
| 123 | Q | H | -1.1111 | |
| 124 | V | H | 0.0000 | |
| 125 | A | H | -0.2639 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.8420 | |
| 128 | S | H | -0.9115 |