| Chain sequence(s) |
A: CIKNGNGCQPNGSQGNCCSGYCHKQPGWVAGYCRRK
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:18)
[INFO] Main: Simulation completed successfully. (00:00:18)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | C | A | 0.2421 | |
| 2 | I | A | -0.7255 | |
| 3 | K | A | -2.8923 | |
| 4 | N | A | -2.9190 | |
| 5 | G | A | -1.7288 | |
| 6 | N | A | -1.3483 | |
| 7 | G | A | -1.1021 | |
| 8 | C | A | 0.0000 | |
| 9 | Q | A | -1.5594 | |
| 10 | P | A | -0.7668 | |
| 11 | N | A | -1.5261 | |
| 12 | G | A | -1.7376 | |
| 13 | S | A | -1.7032 | |
| 14 | Q | A | -2.1022 | |
| 15 | G | A | -1.9590 | |
| 16 | N | A | -1.4838 | |
| 17 | C | A | 0.0000 | |
| 18 | C | A | 0.3274 | |
| 19 | S | A | -0.5790 | |
| 20 | G | A | -0.4912 | |
| 21 | Y | A | -0.7459 | |
| 22 | C | A | -1.3000 | |
| 23 | H | A | -1.4706 | |
| 24 | K | A | -0.8276 | |
| 25 | Q | A | -0.7564 | |
| 26 | P | A | -0.4071 | |
| 27 | G | A | 0.0906 | |
| 28 | W | A | 1.4839 | |
| 29 | V | A | 1.6313 | |
| 30 | A | A | 0.2497 | |
| 31 | G | A | 0.0000 | |
| 32 | Y | A | -0.8105 | |
| 33 | C | A | 0.0000 | |
| 34 | R | A | -2.5871 | |
| 35 | R | A | -3.3527 | |
| 36 | K | A | -2.9960 |