Chain sequence(s) |
A: AIITVTPKSFGSPGSLGKLLCEVTPVSGQERFVWSSLDTPSQRSFSGPWLEAQEAQLLSQPWQCQLYQGERLLGAAVYFTEL
H: QVQLVQSGAEVKKPGASVKVSCKASGFTLTNYGMNWVRQARGQRLEWIGWINTDTGEPTYADDFKGRFVFSLDTSVSTAYLQISSLKAEDTAVYYCARNPPYYYGTNNAEAMDYWGQGTTVTVSS L: DIQMTQSPSSLSASVGDRVTITCSSSQDISNYLNWYLQKPGQSPQLLIYYTSTLHLGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYYNLPWTFGQGTKVEIK input PDB |
Selected Chain(s) | A,H,L |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:42) [INFO] Main: Simulation completed successfully. (00:02:44) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | A | A | 0.3892 | |
2 | I | A | 0.6601 | |
3 | I | A | 0.1615 | |
4 | T | A | -0.0832 | |
5 | V | A | -0.0522 | |
6 | T | A | -0.4871 | |
7 | P | A | -1.0329 | |
8 | K | A | -1.5181 | |
9 | S | A | -0.6171 | |
10 | F | A | 0.8766 | |
11 | G | A | -0.0231 | |
12 | S | A | -0.1391 | |
13 | P | A | -0.3548 | |
14 | G | A | -0.7849 | |
15 | S | A | -0.8930 | |
16 | L | A | -0.3793 | |
17 | G | A | 0.0000 | |
18 | K | A | -0.7247 | |
19 | L | A | 0.0000 | |
20 | L | A | -0.5057 | |
21 | C | A | 0.0000 | |
22 | E | A | -1.0625 | |
23 | V | A | 0.0132 | |
24 | T | A | 0.2484 | |
25 | P | A | 0.5158 | |
26 | V | A | 1.0935 | |
27 | S | A | -0.0405 | |
28 | G | A | -0.8758 | |
29 | Q | A | -1.6844 | |
30 | E | A | -1.4592 | |
31 | R | A | -1.9658 | |
32 | F | A | -0.3882 | |
33 | V | A | -0.0839 | |
34 | W | A | 0.0000 | |
35 | S | A | -0.2380 | |
36 | S | A | 0.0000 | |
37 | L | A | 0.1202 | |
38 | D | A | -1.5792 | |
39 | T | A | -0.9492 | |
40 | P | A | -0.7152 | |
41 | S | A | -0.3904 | |
42 | Q | A | -0.4752 | |
43 | R | A | 0.0000 | |
44 | S | A | -0.0991 | |
45 | F | A | 0.3436 | |
46 | S | A | -0.0809 | |
47 | G | A | -0.1603 | |
48 | P | A | -0.2301 | |
49 | W | A | 0.1782 | |
50 | L | A | 0.0000 | |
51 | E | A | -0.5535 | |
52 | A | A | -1.0668 | |
53 | Q | A | 0.0000 | |
54 | E | A | -1.8394 | |
55 | A | A | -0.8710 | |
56 | Q | A | -0.4594 | |
57 | L | A | 0.1572 | |
58 | L | A | 1.2458 | |
59 | S | A | 0.3258 | |
60 | Q | A | 0.0000 | |
61 | P | A | 0.0000 | |
62 | W | A | 0.0000 | |
63 | Q | A | 0.3807 | |
64 | C | A | 0.0000 | |
65 | Q | A | 0.0900 | |
66 | L | A | 0.0000 | |
67 | Y | A | -1.0047 | |
68 | Q | A | -1.6333 | |
69 | G | A | -2.0651 | |
70 | E | A | -2.9089 | |
71 | R | A | -2.1965 | |
72 | L | A | -0.0022 | |
73 | L | A | 0.7497 | |
74 | G | A | 0.4166 | |
75 | A | A | 0.5036 | |
76 | A | A | 0.5115 | |
77 | V | A | 1.3152 | |
78 | Y | A | 1.4923 | |
79 | F | A | 2.0903 | |
80 | T | A | 1.0521 | |
81 | E | A | -0.4998 | |
82 | L | A | 1.1067 | |
83 | Q | H | -1.4578 | |
84 | V | H | -0.7677 | |
85 | Q | H | -1.2717 | |
86 | L | H | 0.0000 | |
87 | V | H | 0.3159 | |
88 | Q | H | 0.0000 | |
89 | S | H | -0.5334 | |
90 | G | H | -0.5851 | |
91 | A | H | -0.0042 | |
92 | E | H | 0.0215 | |
93 | V | H | 0.9229 | |
94 | K | H | -0.9126 | |
95 | K | H | -2.0819 | |
96 | P | H | -1.8404 | |
97 | G | H | -1.4304 | |
98 | A | H | -1.1581 | |
99 | S | H | -1.2166 | |
100 | V | H | 0.0000 | |
101 | K | H | -1.9070 | |
102 | V | H | 0.0000 | |
103 | S | H | -0.4705 | |
104 | C | H | 0.0000 | |
105 | K | H | -0.5675 | |
106 | A | H | -0.3315 | |
107 | S | H | -0.7543 | |
108 | G | H | -0.9911 | |
109 | F | H | -0.2959 | |
110 | T | H | -0.0070 | |
111 | L | H | 0.0000 | |
112 | T | H | -0.5133 | |
113 | N | H | -0.8176 | |
114 | Y | H | 0.1596 | |
115 | G | H | 0.0000 | |
116 | M | H | 0.0000 | |
117 | N | H | 0.0000 | |
118 | W | H | 0.0000 | |
119 | V | H | 0.0000 | |
120 | R | H | -0.3171 | |
121 | Q | H | -0.7650 | |
122 | A | H | -1.4107 | |
123 | R | H | -2.2516 | |
124 | G | H | -1.7469 | |
125 | Q | H | -1.1474 | |
126 | R | H | 0.0000 | |
127 | L | H | 0.0000 | |
128 | E | H | -0.5214 | |
129 | W | H | 0.0000 | |
130 | I | H | 0.0000 | |
131 | G | H | 0.0000 | |
132 | W | H | 0.0000 | |
133 | I | H | 0.0000 | |
134 | N | H | 0.0000 | |
135 | T | H | -1.1091 | |
136 | D | H | -2.1389 | |
137 | T | H | -1.2441 | |
138 | G | H | -1.4681 | |
139 | E | H | -1.9247 | |
140 | P | H | -0.6361 | |
141 | T | H | -0.4510 | |
142 | Y | H | -0.8562 | |
143 | A | H | 0.0000 | |
144 | D | H | -3.1178 | |
145 | D | H | -3.0267 | |
146 | F | H | -1.8440 | |
147 | K | H | -2.2222 | |
148 | G | H | -1.5046 | |
149 | R | H | -1.1796 | |
150 | F | H | 0.0000 | |
151 | V | H | 0.0133 | |
152 | F | H | 0.0000 | |
153 | S | H | -0.1105 | |
154 | L | H | 0.1744 | |
155 | D | H | -0.5913 | |
156 | T | H | -0.2346 | |
157 | S | H | 0.1177 | |
158 | V | H | 0.7544 | |
159 | S | H | -0.0517 | |
160 | T | H | 0.0000 | |
161 | A | H | 0.0000 | |
162 | Y | H | -0.3732 | |
163 | L | H | 0.0000 | |
164 | Q | H | -1.1245 | |
165 | I | H | 0.0000 | |
166 | S | H | -0.8942 | |
167 | S | H | -1.0262 | |
168 | L | H | 0.0000 | |
169 | K | H | -2.3967 | |
170 | A | H | -1.8303 | |
171 | E | H | -2.2276 | |
172 | D | H | 0.0000 | |
173 | T | H | -0.9456 | |
174 | A | H | 0.0000 | |
175 | V | H | -0.2292 | |
176 | Y | H | 0.0000 | |
177 | Y | H | 0.0000 | |
178 | C | H | 0.0000 | |
179 | A | H | 0.0000 | |
180 | R | H | 0.0000 | |
181 | N | H | -0.2618 | |
182 | P | H | 0.2590 | |
183 | P | H | 0.7633 | |
184 | Y | H | 1.9235 | |
185 | Y | H | 2.1626 | |
186 | Y | H | 1.4584 | |
187 | G | H | 0.4878 | |
188 | T | H | -0.5657 | |
189 | N | H | 0.0000 | |
190 | N | H | -0.8450 | |
191 | A | H | 0.0000 | |
192 | E | H | -1.7851 | |
193 | A | H | 0.0000 | |
194 | M | H | 0.0000 | |
195 | D | H | -0.5013 | |
196 | Y | H | -0.1919 | |
197 | W | H | 0.0000 | |
198 | G | H | 0.0000 | |
199 | Q | H | -1.4560 | |
200 | G | H | -0.7327 | |
201 | T | H | 0.0000 | |
202 | T | H | 0.0155 | |
203 | V | H | 0.0000 | |
204 | T | H | -0.2989 | |
205 | V | H | 0.0000 | |
206 | S | H | -0.8340 | |
207 | S | H | -0.8321 | |
208 | D | L | -1.5988 | |
209 | I | L | -0.1347 | |
210 | Q | L | -0.8525 | |
211 | M | L | 0.0802 | |
212 | T | L | 0.0000 | |
213 | Q | L | 0.0000 | |
214 | S | L | -0.3403 | |
215 | P | L | -0.6212 | |
216 | S | L | -0.7863 | |
217 | S | L | -1.0372 | |
218 | L | L | -0.6871 | |
219 | S | L | -1.0978 | |
220 | A | L | 0.0000 | |
221 | S | L | -1.0621 | |
222 | V | L | -0.2895 | |
223 | G | L | -1.0460 | |
224 | D | L | -2.0933 | |
225 | R | L | -2.4389 | |
226 | V | L | 0.0000 | |
227 | T | L | -0.4897 | |
228 | I | L | 0.0000 | |
229 | T | L | -0.5435 | |
230 | C | L | 0.0000 | |
231 | S | L | -1.3680 | |
232 | S | L | -1.5074 | |
233 | S | L | -1.1354 | |
234 | Q | L | -1.8035 | |
235 | D | L | -2.5989 | |
236 | I | L | -0.7344 | |
237 | S | L | -1.1065 | |
238 | N | L | -0.6848 | |
239 | Y | L | 0.4568 | |
240 | L | L | 0.0000 | |
241 | N | L | 0.0000 | |
242 | W | L | 0.0000 | |
243 | Y | L | 0.0000 | |
244 | L | L | -0.4062 | |
245 | Q | L | -0.8986 | |
246 | K | L | -1.1545 | |
247 | P | L | -0.9411 | |
248 | G | L | -1.3597 | |
249 | Q | L | -1.9893 | |
250 | S | L | -1.4230 | |
251 | P | L | 0.0000 | |
252 | Q | L | -1.3930 | |
253 | L | L | 0.0000 | |
254 | L | L | 0.0000 | |
255 | I | L | 0.0000 | |
256 | Y | L | 0.7199 | |
257 | Y | L | 0.8190 | |
258 | T | L | 0.0000 | |
259 | S | L | -0.0625 | |
260 | T | L | 0.4862 | |
261 | L | L | 0.7996 | |
262 | H | L | 0.5421 | |
263 | L | L | 1.3966 | |
264 | G | L | 0.4084 | |
265 | V | L | 0.4031 | |
266 | P | L | -0.1537 | |
267 | S | L | -0.4600 | |
268 | R | L | -0.9722 | |
269 | F | L | 0.0000 | |
270 | S | L | -0.3691 | |
271 | G | L | -0.1692 | |
272 | S | L | -0.7829 | |
273 | G | L | -1.2355 | |
274 | S | L | -1.3446 | |
275 | G | L | -1.6084 | |
276 | T | L | -2.0465 | |
277 | E | L | -2.4710 | |
278 | F | L | 0.0000 | |
279 | T | L | -0.6761 | |
280 | L | L | 0.0000 | |
281 | T | L | -0.6426 | |
282 | I | L | 0.0000 | |
283 | S | L | -1.5576 | |
284 | S | L | -1.4565 | |
285 | L | L | 0.0000 | |
286 | Q | L | -1.1152 | |
287 | P | L | -1.0124 | |
288 | D | L | -1.6241 | |
289 | D | L | 0.0000 | |
290 | F | L | -0.4082 | |
291 | A | L | 0.0000 | |
292 | T | L | 0.0000 | |
293 | Y | L | 0.0000 | |
294 | Y | L | 0.0000 | |
295 | C | L | 0.0000 | |
296 | Q | L | 0.0000 | |
297 | Q | L | 0.0000 | |
298 | Y | L | 0.0000 | |
299 | Y | L | 0.2890 | |
300 | N | L | -0.2670 | |
301 | L | L | 0.0000 | |
302 | P | L | -0.4374 | |
303 | W | L | 0.0000 | |
304 | T | L | 0.0000 | |
305 | F | L | 0.0000 | |
306 | G | L | 0.0000 | |
307 | Q | L | -0.5759 | |
308 | G | L | 0.0000 | |
309 | T | L | 0.0000 | |
310 | K | L | -1.8694 | |
311 | V | L | 0.0000 | |
312 | E | L | -1.9228 | |
313 | I | L | -0.9883 | |
314 | K | L | -1.7211 |