Project name: b05b40428ef40f0

Status: done

Started: 2025-08-10 19:05:52
Settings
Chain sequence(s) A: AIITVTPKSFGSPGSLGKLLCEVTPVSGQERFVWSSLDTPSQRSFSGPWLEAQEAQLLSQPWQCQLYQGERLLGAAVYFTEL
H: QVQLVQSGAEVKKPGASVKVSCKASGFTLTNYGMNWVRQARGQRLEWIGWINTDTGEPTYADDFKGRFVFSLDTSVSTAYLQISSLKAEDTAVYYCARNPPYYYGTNNAEAMDYWGQGTTVTVSS
L: DIQMTQSPSSLSASVGDRVTITCSSSQDISNYLNWYLQKPGQSPQLLIYYTSTLHLGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYYNLPWTFGQGTKVEIK
input PDB
Selected Chain(s) A,H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:42)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:44)
Show buried residues

Minimal score value
-3.1178
Maximal score value
2.1626
Average score
-0.4392
Total score value
-137.8975

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 A A 0.3892
2 I A 0.6601
3 I A 0.1615
4 T A -0.0832
5 V A -0.0522
6 T A -0.4871
7 P A -1.0329
8 K A -1.5181
9 S A -0.6171
10 F A 0.8766
11 G A -0.0231
12 S A -0.1391
13 P A -0.3548
14 G A -0.7849
15 S A -0.8930
16 L A -0.3793
17 G A 0.0000
18 K A -0.7247
19 L A 0.0000
20 L A -0.5057
21 C A 0.0000
22 E A -1.0625
23 V A 0.0132
24 T A 0.2484
25 P A 0.5158
26 V A 1.0935
27 S A -0.0405
28 G A -0.8758
29 Q A -1.6844
30 E A -1.4592
31 R A -1.9658
32 F A -0.3882
33 V A -0.0839
34 W A 0.0000
35 S A -0.2380
36 S A 0.0000
37 L A 0.1202
38 D A -1.5792
39 T A -0.9492
40 P A -0.7152
41 S A -0.3904
42 Q A -0.4752
43 R A 0.0000
44 S A -0.0991
45 F A 0.3436
46 S A -0.0809
47 G A -0.1603
48 P A -0.2301
49 W A 0.1782
50 L A 0.0000
51 E A -0.5535
52 A A -1.0668
53 Q A 0.0000
54 E A -1.8394
55 A A -0.8710
56 Q A -0.4594
57 L A 0.1572
58 L A 1.2458
59 S A 0.3258
60 Q A 0.0000
61 P A 0.0000
62 W A 0.0000
63 Q A 0.3807
64 C A 0.0000
65 Q A 0.0900
66 L A 0.0000
67 Y A -1.0047
68 Q A -1.6333
69 G A -2.0651
70 E A -2.9089
71 R A -2.1965
72 L A -0.0022
73 L A 0.7497
74 G A 0.4166
75 A A 0.5036
76 A A 0.5115
77 V A 1.3152
78 Y A 1.4923
79 F A 2.0903
80 T A 1.0521
81 E A -0.4998
82 L A 1.1067
83 Q H -1.4578
84 V H -0.7677
85 Q H -1.2717
86 L H 0.0000
87 V H 0.3159
88 Q H 0.0000
89 S H -0.5334
90 G H -0.5851
91 A H -0.0042
92 E H 0.0215
93 V H 0.9229
94 K H -0.9126
95 K H -2.0819
96 P H -1.8404
97 G H -1.4304
98 A H -1.1581
99 S H -1.2166
100 V H 0.0000
101 K H -1.9070
102 V H 0.0000
103 S H -0.4705
104 C H 0.0000
105 K H -0.5675
106 A H -0.3315
107 S H -0.7543
108 G H -0.9911
109 F H -0.2959
110 T H -0.0070
111 L H 0.0000
112 T H -0.5133
113 N H -0.8176
114 Y H 0.1596
115 G H 0.0000
116 M H 0.0000
117 N H 0.0000
118 W H 0.0000
119 V H 0.0000
120 R H -0.3171
121 Q H -0.7650
122 A H -1.4107
123 R H -2.2516
124 G H -1.7469
125 Q H -1.1474
126 R H 0.0000
127 L H 0.0000
128 E H -0.5214
129 W H 0.0000
130 I H 0.0000
131 G H 0.0000
132 W H 0.0000
133 I H 0.0000
134 N H 0.0000
135 T H -1.1091
136 D H -2.1389
137 T H -1.2441
138 G H -1.4681
139 E H -1.9247
140 P H -0.6361
141 T H -0.4510
142 Y H -0.8562
143 A H 0.0000
144 D H -3.1178
145 D H -3.0267
146 F H -1.8440
147 K H -2.2222
148 G H -1.5046
149 R H -1.1796
150 F H 0.0000
151 V H 0.0133
152 F H 0.0000
153 S H -0.1105
154 L H 0.1744
155 D H -0.5913
156 T H -0.2346
157 S H 0.1177
158 V H 0.7544
159 S H -0.0517
160 T H 0.0000
161 A H 0.0000
162 Y H -0.3732
163 L H 0.0000
164 Q H -1.1245
165 I H 0.0000
166 S H -0.8942
167 S H -1.0262
168 L H 0.0000
169 K H -2.3967
170 A H -1.8303
171 E H -2.2276
172 D H 0.0000
173 T H -0.9456
174 A H 0.0000
175 V H -0.2292
176 Y H 0.0000
177 Y H 0.0000
178 C H 0.0000
179 A H 0.0000
180 R H 0.0000
181 N H -0.2618
182 P H 0.2590
183 P H 0.7633
184 Y H 1.9235
185 Y H 2.1626
186 Y H 1.4584
187 G H 0.4878
188 T H -0.5657
189 N H 0.0000
190 N H -0.8450
191 A H 0.0000
192 E H -1.7851
193 A H 0.0000
194 M H 0.0000
195 D H -0.5013
196 Y H -0.1919
197 W H 0.0000
198 G H 0.0000
199 Q H -1.4560
200 G H -0.7327
201 T H 0.0000
202 T H 0.0155
203 V H 0.0000
204 T H -0.2989
205 V H 0.0000
206 S H -0.8340
207 S H -0.8321
208 D L -1.5988
209 I L -0.1347
210 Q L -0.8525
211 M L 0.0802
212 T L 0.0000
213 Q L 0.0000
214 S L -0.3403
215 P L -0.6212
216 S L -0.7863
217 S L -1.0372
218 L L -0.6871
219 S L -1.0978
220 A L 0.0000
221 S L -1.0621
222 V L -0.2895
223 G L -1.0460
224 D L -2.0933
225 R L -2.4389
226 V L 0.0000
227 T L -0.4897
228 I L 0.0000
229 T L -0.5435
230 C L 0.0000
231 S L -1.3680
232 S L -1.5074
233 S L -1.1354
234 Q L -1.8035
235 D L -2.5989
236 I L -0.7344
237 S L -1.1065
238 N L -0.6848
239 Y L 0.4568
240 L L 0.0000
241 N L 0.0000
242 W L 0.0000
243 Y L 0.0000
244 L L -0.4062
245 Q L -0.8986
246 K L -1.1545
247 P L -0.9411
248 G L -1.3597
249 Q L -1.9893
250 S L -1.4230
251 P L 0.0000
252 Q L -1.3930
253 L L 0.0000
254 L L 0.0000
255 I L 0.0000
256 Y L 0.7199
257 Y L 0.8190
258 T L 0.0000
259 S L -0.0625
260 T L 0.4862
261 L L 0.7996
262 H L 0.5421
263 L L 1.3966
264 G L 0.4084
265 V L 0.4031
266 P L -0.1537
267 S L -0.4600
268 R L -0.9722
269 F L 0.0000
270 S L -0.3691
271 G L -0.1692
272 S L -0.7829
273 G L -1.2355
274 S L -1.3446
275 G L -1.6084
276 T L -2.0465
277 E L -2.4710
278 F L 0.0000
279 T L -0.6761
280 L L 0.0000
281 T L -0.6426
282 I L 0.0000
283 S L -1.5576
284 S L -1.4565
285 L L 0.0000
286 Q L -1.1152
287 P L -1.0124
288 D L -1.6241
289 D L 0.0000
290 F L -0.4082
291 A L 0.0000
292 T L 0.0000
293 Y L 0.0000
294 Y L 0.0000
295 C L 0.0000
296 Q L 0.0000
297 Q L 0.0000
298 Y L 0.0000
299 Y L 0.2890
300 N L -0.2670
301 L L 0.0000
302 P L -0.4374
303 W L 0.0000
304 T L 0.0000
305 F L 0.0000
306 G L 0.0000
307 Q L -0.5759
308 G L 0.0000
309 T L 0.0000
310 K L -1.8694
311 V L 0.0000
312 E L -1.9228
313 I L -0.9883
314 K L -1.7211
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Laboratory of Theory of Biopolymers 2018