Project name: query_structure

Status: done

Started: 2026-03-16 22:49:38
Settings
Chain sequence(s) A: VYPCGACRSEVNDDDQAILCEASCQKWFHRECTGMTEAYGLLTEASAVWACDLCKTKE
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:41)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:41)
Show buried residues

Minimal score value
-3.7925
Maximal score value
2.0926
Average score
-1.0087
Total score value
-58.5046

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 V A 1.7237
2 Y A 1.1388
3 P A -0.5671
4 C A 0.0000
5 G A -1.3192
6 A A -1.1190
7 C A -0.9531
8 R A -1.9207
9 S A -1.2245
10 E A -1.1482
11 V A -1.4832
12 N A -2.6516
13 D A -3.5147
14 D A -3.7158
15 D A -3.7925
16 Q A -3.2419
17 A A -1.9442
18 I A -0.4987
19 L A -0.3974
20 C A 0.0000
21 E A -1.7259
22 A A -1.0313
23 S A -1.4816
24 C A -1.2019
25 Q A -2.3035
26 K A -1.9492
27 W A -0.8813
28 F A 0.0000
29 H A 0.0000
30 R A -3.0160
31 E A -2.8822
32 C A -1.6088
33 T A -1.4263
34 G A -1.3068
35 M A -1.0092
36 T A -1.1711
37 E A -1.5219
38 A A 0.2359
39 Y A 1.3853
40 G A 0.9120
41 L A 1.8827
42 L A 2.0926
43 T A 0.4057
44 E A -0.9490
45 A A -0.2957
46 S A -0.1802
47 A A 0.5195
48 V A 1.2334
49 W A 0.5222
50 A A -0.8586
51 C A 0.0000
52 D A -2.0372
53 L A -0.8081
54 C A 0.0000
55 K A -3.0244
56 T A -2.3395
57 K A -3.0811
58 E A -2.9738
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Laboratory of Theory of Biopolymers 2018