| Chain sequence(s) |
A: VYPCGACRSEVNDDDQAILCEASCQKWFHRECTGMTEAYGLLTEASAVWACDLCKTKE
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:41)
[INFO] Main: Simulation completed successfully. (00:00:41)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.7237 | |
| 2 | Y | A | 1.1388 | |
| 3 | P | A | -0.5671 | |
| 4 | C | A | 0.0000 | |
| 5 | G | A | -1.3192 | |
| 6 | A | A | -1.1190 | |
| 7 | C | A | -0.9531 | |
| 8 | R | A | -1.9207 | |
| 9 | S | A | -1.2245 | |
| 10 | E | A | -1.1482 | |
| 11 | V | A | -1.4832 | |
| 12 | N | A | -2.6516 | |
| 13 | D | A | -3.5147 | |
| 14 | D | A | -3.7158 | |
| 15 | D | A | -3.7925 | |
| 16 | Q | A | -3.2419 | |
| 17 | A | A | -1.9442 | |
| 18 | I | A | -0.4987 | |
| 19 | L | A | -0.3974 | |
| 20 | C | A | 0.0000 | |
| 21 | E | A | -1.7259 | |
| 22 | A | A | -1.0313 | |
| 23 | S | A | -1.4816 | |
| 24 | C | A | -1.2019 | |
| 25 | Q | A | -2.3035 | |
| 26 | K | A | -1.9492 | |
| 27 | W | A | -0.8813 | |
| 28 | F | A | 0.0000 | |
| 29 | H | A | 0.0000 | |
| 30 | R | A | -3.0160 | |
| 31 | E | A | -2.8822 | |
| 32 | C | A | -1.6088 | |
| 33 | T | A | -1.4263 | |
| 34 | G | A | -1.3068 | |
| 35 | M | A | -1.0092 | |
| 36 | T | A | -1.1711 | |
| 37 | E | A | -1.5219 | |
| 38 | A | A | 0.2359 | |
| 39 | Y | A | 1.3853 | |
| 40 | G | A | 0.9120 | |
| 41 | L | A | 1.8827 | |
| 42 | L | A | 2.0926 | |
| 43 | T | A | 0.4057 | |
| 44 | E | A | -0.9490 | |
| 45 | A | A | -0.2957 | |
| 46 | S | A | -0.1802 | |
| 47 | A | A | 0.5195 | |
| 48 | V | A | 1.2334 | |
| 49 | W | A | 0.5222 | |
| 50 | A | A | -0.8586 | |
| 51 | C | A | 0.0000 | |
| 52 | D | A | -2.0372 | |
| 53 | L | A | -0.8081 | |
| 54 | C | A | 0.0000 | |
| 55 | K | A | -3.0244 | |
| 56 | T | A | -2.3395 | |
| 57 | K | A | -3.0811 | |
| 58 | E | A | -2.9738 |