| Chain sequence(s) |
A: GLSDGEWQQVLNVWGKVEADIAGHGQEVLIRLFTGHPETLEKFDKFKHLKTEAEMKASEDLKKHGTVVLTALGGILKKKGHHEAELKPLAQSHATKHKIPIKYLEFISDAIIHVLHSKHPGDFGADAQGAMTKALELFRNDIAAKYKELGFQG
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:31)
[INFO] Main: Simulation completed successfully. (00:03:32)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -1.0393 | |
| 2 | L | A | -1.1528 | |
| 3 | S | A | -1.6496 | |
| 4 | D | A | -2.7430 | |
| 5 | G | A | -2.0787 | |
| 6 | E | A | -2.4036 | |
| 7 | W | A | 0.0000 | |
| 8 | Q | A | -2.5266 | |
| 9 | Q | A | -2.2260 | |
| 10 | V | A | 0.0000 | |
| 11 | L | A | -1.5220 | |
| 12 | N | A | -1.8836 | |
| 13 | V | A | 0.0000 | |
| 14 | W | A | 0.0000 | |
| 15 | G | A | -1.8067 | |
| 16 | K | A | -1.8564 | |
| 17 | V | A | 0.0000 | |
| 18 | E | A | -2.4473 | |
| 19 | A | A | -1.6138 | |
| 20 | D | A | -1.8202 | |
| 21 | I | A | -1.0999 | |
| 22 | A | A | -1.2022 | |
| 23 | G | A | -1.0860 | |
| 24 | H | A | 0.0000 | |
| 25 | G | A | 0.0000 | |
| 26 | Q | A | -1.8494 | |
| 27 | E | A | -1.7622 | |
| 28 | V | A | 0.0000 | |
| 29 | L | A | 0.0000 | |
| 30 | I | A | 0.0000 | |
| 31 | R | A | -1.9203 | |
| 32 | L | A | 0.0000 | |
| 33 | F | A | 0.0000 | |
| 34 | T | A | -1.3806 | |
| 35 | G | A | -1.1198 | |
| 36 | H | A | -1.2472 | |
| 37 | P | A | -1.9360 | |
| 38 | E | A | -2.2614 | |
| 39 | T | A | 0.0000 | |
| 40 | L | A | -2.3922 | |
| 41 | E | A | -3.3903 | |
| 42 | K | A | -2.7646 | |
| 43 | F | A | -2.4162 | |
| 44 | D | A | -3.1463 | |
| 45 | K | A | -2.6781 | |
| 46 | F | A | 0.0000 | |
| 47 | K | A | -3.1498 | |
| 48 | H | A | -2.5978 | |
| 49 | L | A | 0.0000 | |
| 50 | K | A | -2.5876 | |
| 51 | T | A | -2.1366 | |
| 52 | E | A | -2.4807 | |
| 53 | A | A | -1.8538 | |
| 54 | E | A | -2.3417 | |
| 55 | M | A | 0.0000 | |
| 56 | K | A | -2.8598 | |
| 57 | A | A | -1.9374 | |
| 58 | S | A | -2.4648 | |
| 59 | E | A | -3.2995 | |
| 60 | D | A | -2.8984 | |
| 61 | L | A | 0.0000 | |
| 62 | K | A | -2.7245 | |
| 63 | K | A | -2.5069 | |
| 64 | H | A | -1.0053 | |
| 65 | G | A | 0.0000 | |
| 66 | T | A | -0.0414 | |
| 67 | V | A | 1.4247 | |
| 68 | V | A | 0.9337 | |
| 69 | L | A | 0.0000 | |
| 70 | T | A | 0.4363 | |
| 71 | A | A | 0.4763 | |
| 72 | L | A | 0.0000 | |
| 73 | G | A | 0.0000 | |
| 74 | G | A | -1.1192 | |
| 75 | I | A | 0.0000 | |
| 76 | L | A | 0.0000 | |
| 77 | K | A | -2.5219 | |
| 78 | K | A | -2.7484 | |
| 79 | K | A | -2.5297 | |
| 80 | G | A | -1.8383 | |
| 81 | H | A | -2.3788 | |
| 82 | H | A | 0.0000 | |
| 83 | E | A | -2.8279 | |
| 84 | A | A | -1.7665 | |
| 85 | E | A | -1.7806 | |
| 86 | L | A | 0.0000 | |
| 87 | K | A | -2.4337 | |
| 88 | P | A | -1.5724 | |
| 89 | L | A | -0.8635 | |
| 90 | A | A | 0.0000 | |
| 91 | Q | A | -1.8400 | |
| 92 | S | A | -1.7899 | |
| 93 | H | A | -1.5822 | |
| 94 | A | A | 0.0000 | |
| 95 | T | A | -1.5509 | |
| 96 | K | A | -2.6520 | |
| 97 | H | A | -2.4340 | |
| 98 | K | A | -2.1461 | |
| 99 | I | A | -1.2096 | |
| 100 | P | A | -1.0049 | |
| 101 | I | A | -1.0625 | |
| 102 | K | A | -1.6387 | |
| 103 | Y | A | -0.8623 | |
| 104 | L | A | -0.9075 | |
| 105 | E | A | -1.8263 | |
| 106 | F | A | -0.9829 | |
| 107 | I | A | -0.7204 | |
| 108 | S | A | -1.3969 | |
| 109 | D | A | -1.9035 | |
| 110 | A | A | 0.0000 | |
| 111 | I | A | 0.0000 | |
| 112 | I | A | -0.7179 | |
| 113 | H | A | -1.2840 | |
| 114 | V | A | 0.0000 | |
| 115 | L | A | 0.0000 | |
| 116 | H | A | -1.4867 | |
| 117 | S | A | -1.2185 | |
| 118 | K | A | -1.8639 | |
| 119 | H | A | -1.7612 | |
| 120 | P | A | -1.6029 | |
| 121 | G | A | -1.7665 | |
| 122 | D | A | -2.3949 | |
| 123 | F | A | 0.0000 | |
| 124 | G | A | -1.6557 | |
| 125 | A | A | -1.3740 | |
| 126 | D | A | -2.1523 | |
| 127 | A | A | -1.9596 | |
| 128 | Q | A | -1.2801 | |
| 129 | G | A | -1.3413 | |
| 130 | A | A | 0.0000 | |
| 131 | M | A | 0.0000 | |
| 132 | T | A | -1.3824 | |
| 133 | K | A | -1.5695 | |
| 134 | A | A | 0.0000 | |
| 135 | L | A | 0.0000 | |
| 136 | E | A | -2.6637 | |
| 137 | L | A | -1.6148 | |
| 138 | F | A | -1.1605 | |
| 139 | R | A | -2.1155 | |
| 140 | N | A | -2.1001 | |
| 141 | D | A | -1.8520 | |
| 142 | I | A | 0.0000 | |
| 143 | A | A | -1.2885 | |
| 144 | A | A | -1.6604 | |
| 145 | K | A | -2.1014 | |
| 146 | Y | A | 0.0000 | |
| 147 | K | A | -2.8702 | |
| 148 | E | A | -2.6429 | |
| 149 | L | A | -1.2328 | |
| 150 | G | A | -1.7370 | |
| 151 | F | A | -1.4804 | |
| 152 | Q | A | -1.8871 | |
| 153 | G | A | -1.5040 |