| Chain sequence(s) |
B: ALAEIKAFKEGVKKAKEIALRLAEEAGLDLEKVKKKLEEIEKIVKKLEAA
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:28)
[INFO] Main: Simulation completed successfully. (00:02:29)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | B | 0.1217 | |
| 2 | L | B | 0.7651 | |
| 3 | A | B | -0.1807 | |
| 4 | E | B | -1.2986 | |
| 5 | I | B | -0.8214 | |
| 6 | K | B | -1.5367 | |
| 7 | A | B | -1.1125 | |
| 8 | F | B | -0.3275 | |
| 9 | K | B | -2.4551 | |
| 10 | E | B | -3.1520 | |
| 11 | G | B | -2.1862 | |
| 12 | V | B | -1.9741 | |
| 13 | K | B | -3.4095 | |
| 14 | K | B | -3.3080 | |
| 15 | A | B | -2.0844 | |
| 16 | K | B | -2.7128 | |
| 17 | E | B | -2.5451 | |
| 18 | I | B | -0.8143 | |
| 19 | A | B | -1.0332 | |
| 20 | L | B | -1.8110 | |
| 21 | R | B | -2.0528 | |
| 22 | L | B | -0.3526 | |
| 23 | A | B | 0.0000 | |
| 24 | E | B | -2.6456 | |
| 25 | E | B | -2.4266 | |
| 26 | A | B | -1.2157 | |
| 27 | G | B | -1.3460 | |
| 28 | L | B | -0.9712 | |
| 29 | D | B | -2.8199 | |
| 30 | L | B | -3.0562 | |
| 31 | E | B | -4.1675 | |
| 32 | K | B | -4.5258 | |
| 33 | V | B | 0.0000 | |
| 34 | K | B | -4.9251 | |
| 35 | K | B | -5.2392 | |
| 36 | K | B | -4.6497 | |
| 37 | L | B | 0.0000 | |
| 38 | E | B | -4.4385 | |
| 39 | E | B | -3.9373 | |
| 40 | I | B | -2.1394 | |
| 41 | E | B | -3.1454 | |
| 42 | K | B | -2.7872 | |
| 43 | I | B | -1.1044 | |
| 44 | V | B | 0.0000 | |
| 45 | K | B | -3.2628 | |
| 46 | K | B | -2.7751 | |
| 47 | L | B | -1.4122 | |
| 48 | E | B | -2.4245 | |
| 49 | A | B | -1.5775 | |
| 50 | A | B | -1.0099 |