| Chain sequence(s) |
A: VSSVPTKLEVVAATPTSLLISWDAPAVTVVYYHITYGETGGFAGHQEFTVPGSKSTATISGLKPGVDYTITVYAYYQPYVSWAKRYSSPISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:26)
[INFO] Main: Simulation completed successfully. (00:01:28)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.7975 | |
| 2 | S | A | 0.7962 | |
| 3 | S | A | 0.6026 | |
| 4 | V | A | 0.4932 | |
| 5 | P | A | 0.0000 | |
| 6 | T | A | -1.5263 | |
| 7 | K | A | -2.5517 | |
| 8 | L | A | 0.0000 | |
| 9 | E | A | -1.9112 | |
| 10 | V | A | 0.0805 | |
| 11 | V | A | 1.5186 | |
| 12 | A | A | 0.8768 | |
| 13 | A | A | 0.2901 | |
| 14 | T | A | -0.5388 | |
| 15 | P | A | -1.1367 | |
| 16 | T | A | -1.0056 | |
| 17 | S | A | -0.5459 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.7049 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -0.9432 | |
| 22 | W | A | 0.0000 | |
| 23 | D | A | -2.4546 | |
| 24 | A | A | -1.1730 | |
| 25 | P | A | 0.0640 | |
| 26 | A | A | 0.4906 | |
| 27 | V | A | 0.7889 | |
| 28 | T | A | 0.3052 | |
| 29 | V | A | 0.0000 | |
| 30 | V | A | 1.1528 | |
| 31 | Y | A | 0.5789 | |
| 32 | Y | A | 0.0000 | |
| 33 | H | A | -0.0768 | |
| 34 | I | A | 0.0000 | |
| 35 | T | A | -1.3067 | |
| 36 | Y | A | 0.0000 | |
| 37 | G | A | 0.0000 | |
| 38 | E | A | -1.4585 | |
| 39 | T | A | -1.0363 | |
| 40 | G | A | -0.3892 | |
| 41 | G | A | 0.0398 | |
| 42 | F | A | 1.3985 | |
| 43 | A | A | 0.1328 | |
| 44 | G | A | -0.9989 | |
| 45 | H | A | -1.9007 | |
| 46 | Q | A | -2.3535 | |
| 47 | E | A | -2.3603 | |
| 48 | F | A | -0.7321 | |
| 49 | T | A | -0.1728 | |
| 50 | V | A | 0.0000 | |
| 51 | P | A | -0.3997 | |
| 52 | G | A | -0.1855 | |
| 53 | S | A | -0.8759 | |
| 54 | K | A | -2.0510 | |
| 55 | S | A | -1.3707 | |
| 56 | T | A | -0.7524 | |
| 57 | A | A | 0.0000 | |
| 58 | T | A | 0.2241 | |
| 59 | I | A | 0.0000 | |
| 60 | S | A | -0.6655 | |
| 61 | G | A | -1.0301 | |
| 62 | L | A | 0.0000 | |
| 63 | K | A | -2.3690 | |
| 64 | P | A | -1.6627 | |
| 65 | G | A | -1.4433 | |
| 66 | V | A | -1.4012 | |
| 67 | D | A | -2.0899 | |
| 68 | Y | A | 0.0000 | |
| 69 | T | A | -1.1323 | |
| 70 | I | A | 0.0000 | |
| 71 | T | A | -0.4207 | |
| 72 | V | A | 0.0000 | |
| 73 | Y | A | 0.6698 | |
| 74 | A | A | 0.0000 | |
| 75 | Y | A | 0.2328 | |
| 76 | Y | A | -0.1071 | |
| 77 | Q | A | -0.8866 | |
| 78 | P | A | -0.3798 | |
| 79 | Y | A | 0.8114 | |
| 80 | V | A | 0.4504 | |
| 81 | S | A | 0.2711 | |
| 82 | W | A | 0.6946 | |
| 83 | A | A | -0.5310 | |
| 84 | K | A | -1.9757 | |
| 85 | R | A | -1.8811 | |
| 86 | Y | A | -0.0349 | |
| 87 | S | A | 0.0000 | |
| 88 | S | A | 0.0806 | |
| 89 | P | A | 0.3220 | |
| 90 | I | A | 0.1341 | |
| 91 | S | A | -0.3523 | |
| 92 | I | A | -0.7366 | |
| 93 | N | A | -1.7517 | |
| 94 | Y | A | -1.4604 | |
| 95 | R | A | -2.5304 | |
| 96 | T | A | -1.6356 |