| Chain sequence(s) |
H: QVQLQQPGAELVKPGASVKMSCKASGYTFTSYNMHWVKQTPGRGLEWIGAIYPGNGDTSYNQKFKGKATLTADKSSSTAYMQLSSLTSEDSAVYYCARSTYYGGDWYFNVWGAGTTVTVSA
L: QIVLSQSPAILSASPGEKVTMTCRASSSVSYIHWFQQKPGSSPKPWIYATSNLASGVPVRFSGSGSGTSYSLTISRVEAEDAATYYCQQWTSNPPTFGGGTKLEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:00)
[INFO] Main: Simulation completed successfully. (00:01:01)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.2593 | |
| 2 | V | H | -0.5411 | |
| 3 | Q | H | -1.2741 | |
| 4 | L | H | 0.0000 | |
| 5 | Q | H | -1.5233 | |
| 6 | Q | H | -1.0043 | |
| 7 | P | H | -0.7499 | |
| 8 | G | H | -0.6702 | |
| 9 | A | H | -0.0917 | |
| 11 | E | H | 0.0685 | |
| 12 | L | H | 0.9450 | |
| 13 | V | H | 0.0000 | |
| 14 | K | H | -1.5539 | |
| 15 | P | H | -1.1121 | |
| 16 | G | H | -1.1051 | |
| 17 | A | H | -0.8880 | |
| 18 | S | H | -0.9200 | |
| 19 | V | H | -0.6159 | |
| 20 | K | H | -1.1383 | |
| 21 | M | H | 0.0000 | |
| 22 | S | H | -0.6369 | |
| 23 | C | H | 0.0000 | |
| 24 | K | H | -1.4525 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -0.9180 | |
| 27 | G | H | -0.7747 | |
| 28 | Y | H | -0.2111 | |
| 29 | T | H | -0.1607 | |
| 30 | F | H | 0.0000 | |
| 35 | T | H | -0.6501 | |
| 36 | S | H | -0.1838 | |
| 37 | Y | H | 0.3831 | |
| 38 | N | H | -0.3195 | |
| 39 | M | H | 0.0000 | |
| 40 | H | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | K | H | 0.0000 | |
| 44 | Q | H | -0.3456 | |
| 45 | T | H | 0.0000 | |
| 46 | P | H | -0.6835 | |
| 47 | G | H | -1.2046 | |
| 48 | R | H | -1.1680 | |
| 49 | G | H | -0.8241 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.6194 | |
| 52 | W | H | 0.0000 | |
| 53 | I | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | A | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | Y | H | -0.6572 | |
| 58 | P | H | 0.0000 | |
| 59 | G | H | -1.2665 | |
| 62 | N | H | -2.0384 | |
| 63 | G | H | -1.9273 | |
| 64 | D | H | -2.2490 | |
| 65 | T | H | -1.0726 | |
| 66 | S | H | -0.9414 | |
| 67 | Y | H | -1.2908 | |
| 68 | N | H | -2.0393 | |
| 69 | Q | H | -2.9077 | |
| 70 | K | H | -2.9136 | |
| 71 | F | H | 0.0000 | |
| 72 | K | H | -2.9053 | |
| 74 | G | H | -1.9091 | |
| 75 | K | H | -1.6092 | |
| 76 | A | H | 0.0000 | |
| 77 | T | H | -0.7588 | |
| 78 | L | H | 0.0000 | |
| 79 | T | H | -0.5799 | |
| 80 | A | H | -0.8048 | |
| 81 | D | H | -1.3818 | |
| 82 | K | H | -1.9076 | |
| 83 | S | H | -1.0583 | |
| 84 | S | H | -0.9150 | |
| 85 | S | H | -1.0485 | |
| 86 | T | H | 0.0000 | |
| 87 | A | H | 0.0000 | |
| 88 | Y | H | -0.2900 | |
| 89 | M | H | 0.0000 | |
| 90 | Q | H | -0.9591 | |
| 91 | L | H | 0.0000 | |
| 92 | S | H | -0.7390 | |
| 93 | S | H | -0.8214 | |
| 94 | L | H | 0.0000 | |
| 95 | T | H | -1.2002 | |
| 96 | S | H | -1.1755 | |
| 97 | E | H | -1.9886 | |
| 98 | D | H | 0.0000 | |
| 99 | S | H | -0.5124 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.2007 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | R | H | 0.0000 | |
| 107 | S | H | 0.0000 | |
| 108 | T | H | 0.0000 | |
| 109 | Y | H | 2.0609 | |
| 110 | Y | H | 1.7970 | |
| 111 | G | H | 0.3367 | |
| 112A | G | H | 0.3339 | |
| 112 | D | H | 0.0000 | |
| 113 | W | H | 1.4316 | |
| 114 | Y | H | 0.8730 | |
| 115 | F | H | 0.0000 | |
| 116 | N | H | 0.0204 | |
| 117 | V | H | -0.0889 | |
| 118 | W | H | 0.0000 | |
| 119 | G | H | 0.0000 | |
| 120 | A | H | -0.3937 | |
| 121 | G | H | 0.0000 | |
| 122 | T | H | 0.0000 | |
| 123 | T | H | 0.0920 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.1820 | |
| 126 | V | H | -0.5042 | |
| 127 | S | H | -0.3845 | |
| 128 | A | H | -0.4672 | |
| 1 | Q | L | -1.0766 | |
| 2 | I | L | 0.1260 | |
| 3 | V | L | 1.1026 | |
| 4 | L | L | 0.0000 | |
| 5 | S | L | -0.5763 | |
| 6 | Q | L | -0.5054 | |
| 7 | S | L | -0.4088 | |
| 8 | P | L | 0.1681 | |
| 9 | A | L | 0.3855 | |
| 10 | I | L | 1.1919 | |
| 11 | L | L | 0.5131 | |
| 12 | S | L | -0.3080 | |
| 13 | A | L | 0.0000 | |
| 14 | S | L | -1.7173 | |
| 15 | P | L | -1.8491 | |
| 16 | G | L | -2.1277 | |
| 17 | E | L | -2.6418 | |
| 18 | K | L | -2.8473 | |
| 19 | V | L | 0.0000 | |
| 20 | T | L | -0.5304 | |
| 21 | M | L | 0.0000 | |
| 22 | T | L | -0.6258 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -1.6672 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -0.2498 | |
| 27 | S | L | -0.4172 | |
| 28 | S | L | -0.6281 | |
| 29 | V | L | 0.0000 | |
| 37 | S | L | -0.1986 | |
| 38 | Y | L | 0.2070 | |
| 39 | I | L | 0.0000 | |
| 40 | H | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | F | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | -0.7155 | |
| 45 | K | L | -1.0357 | |
| 46 | P | L | -0.7062 | |
| 47 | G | L | -0.6883 | |
| 48 | S | L | -0.6339 | |
| 49 | S | L | -0.3825 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -0.7676 | |
| 52 | P | L | -0.3553 | |
| 53 | W | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | 0.1513 | |
| 56 | A | L | 0.0970 | |
| 57 | T | L | -0.2657 | |
| 65 | S | L | -0.4981 | |
| 66 | N | L | -0.7248 | |
| 67 | L | L | 0.1655 | |
| 68 | A | L | -0.3382 | |
| 69 | S | L | -0.4804 | |
| 70 | G | L | -0.2900 | |
| 71 | V | L | 0.0000 | |
| 72 | P | L | 0.6036 | |
| 74 | V | L | 1.4071 | |
| 75 | R | L | -0.2938 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.0757 | |
| 78 | G | L | -0.4409 | |
| 79 | S | L | -0.5755 | |
| 80 | G | L | -0.7934 | |
| 83 | S | L | -0.7002 | |
| 84 | G | L | -0.6999 | |
| 85 | T | L | -0.9211 | |
| 86 | S | L | -1.0732 | |
| 87 | Y | L | 0.0000 | |
| 88 | S | L | -0.5580 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.7826 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.8423 | |
| 93 | R | L | -3.0954 | |
| 94 | V | L | 0.0000 | |
| 95 | E | L | -2.5683 | |
| 96 | A | L | -1.6462 | |
| 97 | E | L | -2.0806 | |
| 98 | D | L | 0.0000 | |
| 99 | A | L | -1.0118 | |
| 100 | A | L | 0.0000 | |
| 101 | T | L | -0.4507 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | -0.2384 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | W | L | -0.0055 | |
| 108 | T | L | -0.2624 | |
| 109 | S | L | -0.8827 | |
| 114 | N | L | -1.7136 | |
| 115 | P | L | -1.5071 | |
| 116 | P | L | 0.0000 | |
| 117 | T | L | -0.0656 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | G | L | -0.6498 | |
| 121 | G | L | -0.3521 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -0.5533 | |
| 124 | L | L | 0.0000 | |
| 125 | E | L | -0.4782 | |
| 126 | I | L | -0.9862 | |
| 127 | K | L | -1.6543 |