Project name: b09b73f751487be

Status: done

Started: 2026-05-29 06:45:34
Settings
Chain sequence(s) H: QVQLQQPGAELVKPGASVKMSCKASGYTFTSYNMHWVKQTPGRGLEWIGAIYPGNGDTSYNQKFKGKATLTADKSSSTAYMQLSSLTSEDSAVYYCARSTYYGGDWYFNVWGAGTTVTVSA
L: QIVLSQSPAILSASPGEKVTMTCRASSSVSYIHWFQQKPGSSPKPWIYATSNLASGVPVRFSGSGSGTSYSLTISRVEAEDAATYYCQQWTSNPPTFGGGTKLEIK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:00)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:01)
Show buried residues

Minimal score value
-3.0954
Maximal score value
2.0609
Average score
-0.4788
Total score value
-108.6794

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q H -1.2593
2 V H -0.5411
3 Q H -1.2741
4 L H 0.0000
5 Q H -1.5233
6 Q H -1.0043
7 P H -0.7499
8 G H -0.6702
9 A H -0.0917
11 E H 0.0685
12 L H 0.9450
13 V H 0.0000
14 K H -1.5539
15 P H -1.1121
16 G H -1.1051
17 A H -0.8880
18 S H -0.9200
19 V H -0.6159
20 K H -1.1383
21 M H 0.0000
22 S H -0.6369
23 C H 0.0000
24 K H -1.4525
25 A H 0.0000
26 S H -0.9180
27 G H -0.7747
28 Y H -0.2111
29 T H -0.1607
30 F H 0.0000
35 T H -0.6501
36 S H -0.1838
37 Y H 0.3831
38 N H -0.3195
39 M H 0.0000
40 H H 0.0000
41 W H 0.0000
42 V H 0.0000
43 K H 0.0000
44 Q H -0.3456
45 T H 0.0000
46 P H -0.6835
47 G H -1.2046
48 R H -1.1680
49 G H -0.8241
50 L H 0.0000
51 E H -0.6194
52 W H 0.0000
53 I H 0.0000
54 G H 0.0000
55 A H 0.0000
56 I H 0.0000
57 Y H -0.6572
58 P H 0.0000
59 G H -1.2665
62 N H -2.0384
63 G H -1.9273
64 D H -2.2490
65 T H -1.0726
66 S H -0.9414
67 Y H -1.2908
68 N H -2.0393
69 Q H -2.9077
70 K H -2.9136
71 F H 0.0000
72 K H -2.9053
74 G H -1.9091
75 K H -1.6092
76 A H 0.0000
77 T H -0.7588
78 L H 0.0000
79 T H -0.5799
80 A H -0.8048
81 D H -1.3818
82 K H -1.9076
83 S H -1.0583
84 S H -0.9150
85 S H -1.0485
86 T H 0.0000
87 A H 0.0000
88 Y H -0.2900
89 M H 0.0000
90 Q H -0.9591
91 L H 0.0000
92 S H -0.7390
93 S H -0.8214
94 L H 0.0000
95 T H -1.2002
96 S H -1.1755
97 E H -1.9886
98 D H 0.0000
99 S H -0.5124
100 A H 0.0000
101 V H 0.2007
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 A H 0.0000
106 R H 0.0000
107 S H 0.0000
108 T H 0.0000
109 Y H 2.0609
110 Y H 1.7970
111 G H 0.3367
112A G H 0.3339
112 D H 0.0000
113 W H 1.4316
114 Y H 0.8730
115 F H 0.0000
116 N H 0.0204
117 V H -0.0889
118 W H 0.0000
119 G H 0.0000
120 A H -0.3937
121 G H 0.0000
122 T H 0.0000
123 T H 0.0920
124 V H 0.0000
125 T H 0.1820
126 V H -0.5042
127 S H -0.3845
128 A H -0.4672
1 Q L -1.0766
2 I L 0.1260
3 V L 1.1026
4 L L 0.0000
5 S L -0.5763
6 Q L -0.5054
7 S L -0.4088
8 P L 0.1681
9 A L 0.3855
10 I L 1.1919
11 L L 0.5131
12 S L -0.3080
13 A L 0.0000
14 S L -1.7173
15 P L -1.8491
16 G L -2.1277
17 E L -2.6418
18 K L -2.8473
19 V L 0.0000
20 T L -0.5304
21 M L 0.0000
22 T L -0.6258
23 C L 0.0000
24 R L -1.6672
25 A L 0.0000
26 S L -0.2498
27 S L -0.4172
28 S L -0.6281
29 V L 0.0000
37 S L -0.1986
38 Y L 0.2070
39 I L 0.0000
40 H L 0.0000
41 W L 0.0000
42 F L 0.0000
43 Q L 0.0000
44 Q L -0.7155
45 K L -1.0357
46 P L -0.7062
47 G L -0.6883
48 S L -0.6339
49 S L -0.3825
50 P L 0.0000
51 K L -0.7676
52 P L -0.3553
53 W L 0.0000
54 I L 0.0000
55 Y L 0.1513
56 A L 0.0970
57 T L -0.2657
65 S L -0.4981
66 N L -0.7248
67 L L 0.1655
68 A L -0.3382
69 S L -0.4804
70 G L -0.2900
71 V L 0.0000
72 P L 0.6036
74 V L 1.4071
75 R L -0.2938
76 F L 0.0000
77 S L -0.0757
78 G L -0.4409
79 S L -0.5755
80 G L -0.7934
83 S L -0.7002
84 G L -0.6999
85 T L -0.9211
86 S L -1.0732
87 Y L 0.0000
88 S L -0.5580
89 L L 0.0000
90 T L -0.7826
91 I L 0.0000
92 S L -1.8423
93 R L -3.0954
94 V L 0.0000
95 E L -2.5683
96 A L -1.6462
97 E L -2.0806
98 D L 0.0000
99 A L -1.0118
100 A L 0.0000
101 T L -0.4507
102 Y L 0.0000
103 Y L -0.2384
104 C L 0.0000
105 Q L 0.0000
106 Q L 0.0000
107 W L -0.0055
108 T L -0.2624
109 S L -0.8827
114 N L -1.7136
115 P L -1.5071
116 P L 0.0000
117 T L -0.0656
118 F L 0.0000
119 G L 0.0000
120 G L -0.6498
121 G L -0.3521
122 T L 0.0000
123 K L -0.5533
124 L L 0.0000
125 E L -0.4782
126 I L -0.9862
127 K L -1.6543
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Laboratory of Theory of Biopolymers 2018