| Chain sequence(s) |
A: LPAPKNLVVSEVTEDSLRLSVVTAPDAAFDSFLIQYQESEKVGEAINLTVPGSERSYDLTGLKPGTEYTVSIYGVLGSYVFEHDVMLPLSAEFTT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:56)
[INFO] Main: Simulation completed successfully. (00:01:57)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | A | 1.5500 | |
| 2 | P | A | -0.0462 | |
| 3 | A | A | 0.2514 | |
| 4 | P | A | 0.0000 | |
| 5 | K | A | -1.6996 | |
| 6 | N | A | -1.1009 | |
| 7 | L | A | 0.0000 | |
| 8 | V | A | 0.7317 | |
| 9 | V | A | -0.3341 | |
| 10 | S | A | -0.9643 | |
| 11 | E | A | -2.1730 | |
| 12 | V | A | -1.1007 | |
| 13 | T | A | -1.7606 | |
| 14 | E | A | -2.9529 | |
| 15 | D | A | -2.5721 | |
| 16 | S | A | -2.1595 | |
| 17 | L | A | 0.0000 | |
| 18 | R | A | -2.0247 | |
| 19 | L | A | 0.0000 | |
| 20 | S | A | -0.7426 | |
| 21 | V | A | 0.0000 | |
| 22 | V | A | -0.4669 | |
| 23 | T | A | -1.1147 | |
| 24 | A | A | -0.9355 | |
| 25 | P | A | -1.0387 | |
| 26 | D | A | -1.6759 | |
| 27 | A | A | -0.8852 | |
| 28 | A | A | -0.6638 | |
| 29 | F | A | 0.0000 | |
| 30 | D | A | -1.6725 | |
| 31 | S | A | -1.0494 | |
| 32 | F | A | 0.0000 | |
| 33 | L | A | -0.1252 | |
| 34 | I | A | 0.0000 | |
| 35 | Q | A | -0.2950 | |
| 36 | Y | A | -0.3970 | |
| 37 | Q | A | -1.3548 | |
| 38 | E | A | -2.1171 | |
| 39 | S | A | -2.0812 | |
| 40 | E | A | -2.5837 | |
| 41 | K | A | -1.9791 | |
| 42 | V | A | -0.0219 | |
| 43 | G | A | -0.8840 | |
| 44 | E | A | -1.9533 | |
| 45 | A | A | -0.6558 | |
| 46 | I | A | 0.2027 | |
| 47 | N | A | -0.6377 | |
| 48 | L | A | 0.1259 | |
| 49 | T | A | -0.1410 | |
| 50 | V | A | 0.0000 | |
| 51 | P | A | -1.3577 | |
| 52 | G | A | -1.5715 | |
| 53 | S | A | -1.6309 | |
| 54 | E | A | -2.1854 | |
| 55 | R | A | -2.0220 | |
| 56 | S | A | -1.5992 | |
| 57 | Y | A | 0.0000 | |
| 58 | D | A | -2.4362 | |
| 59 | L | A | 0.0000 | |
| 60 | T | A | -1.5323 | |
| 61 | G | A | -1.6272 | |
| 62 | L | A | 0.0000 | |
| 63 | K | A | -2.9661 | |
| 64 | P | A | -2.5059 | |
| 65 | G | A | -1.8342 | |
| 66 | T | A | -2.2348 | |
| 67 | E | A | -2.7527 | |
| 68 | Y | A | 0.0000 | |
| 69 | T | A | -1.4486 | |
| 70 | V | A | 0.0000 | |
| 71 | S | A | 0.0000 | |
| 72 | I | A | 0.0000 | |
| 73 | Y | A | 0.0000 | |
| 74 | G | A | 0.0000 | |
| 75 | V | A | -0.0097 | |
| 76 | L | A | 0.2845 | |
| 77 | G | A | -0.3421 | |
| 78 | S | A | 0.1967 | |
| 79 | Y | A | 0.8910 | |
| 80 | V | A | 0.4477 | |
| 81 | F | A | 0.0000 | |
| 82 | E | A | -1.7416 | |
| 83 | H | A | -1.7915 | |
| 84 | D | A | -1.6116 | |
| 85 | V | A | 0.6900 | |
| 86 | M | A | 0.5720 | |
| 87 | L | A | 0.7791 | |
| 88 | P | A | 0.0000 | |
| 89 | L | A | 0.1978 | |
| 90 | S | A | -0.2489 | |
| 91 | A | A | -0.7654 | |
| 92 | E | A | -2.1562 | |
| 93 | F | A | 0.0000 | |
| 94 | T | A | -1.6340 | |
| 95 | T | A | -1.9111 |