Project name: query_structure

Status: done

Started: 2026-03-16 20:29:07
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Chain sequence(s) A: LPAPKNLVVSEVTEDSLRLSVVTAPDAAFDSFLIQYQESEKVGEAINLTVPGSERSYDLTGLKPGTEYTVSIYGVLGSYVFEHDVMLPLSAEFTT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:56)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:57)
Show buried residues

Minimal score value
-2.9661
Maximal score value
1.55
Average score
-0.8353
Total score value
-79.3569

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 L A 1.5500
2 P A -0.0462
3 A A 0.2514
4 P A 0.0000
5 K A -1.6996
6 N A -1.1009
7 L A 0.0000
8 V A 0.7317
9 V A -0.3341
10 S A -0.9643
11 E A -2.1730
12 V A -1.1007
13 T A -1.7606
14 E A -2.9529
15 D A -2.5721
16 S A -2.1595
17 L A 0.0000
18 R A -2.0247
19 L A 0.0000
20 S A -0.7426
21 V A 0.0000
22 V A -0.4669
23 T A -1.1147
24 A A -0.9355
25 P A -1.0387
26 D A -1.6759
27 A A -0.8852
28 A A -0.6638
29 F A 0.0000
30 D A -1.6725
31 S A -1.0494
32 F A 0.0000
33 L A -0.1252
34 I A 0.0000
35 Q A -0.2950
36 Y A -0.3970
37 Q A -1.3548
38 E A -2.1171
39 S A -2.0812
40 E A -2.5837
41 K A -1.9791
42 V A -0.0219
43 G A -0.8840
44 E A -1.9533
45 A A -0.6558
46 I A 0.2027
47 N A -0.6377
48 L A 0.1259
49 T A -0.1410
50 V A 0.0000
51 P A -1.3577
52 G A -1.5715
53 S A -1.6309
54 E A -2.1854
55 R A -2.0220
56 S A -1.5992
57 Y A 0.0000
58 D A -2.4362
59 L A 0.0000
60 T A -1.5323
61 G A -1.6272
62 L A 0.0000
63 K A -2.9661
64 P A -2.5059
65 G A -1.8342
66 T A -2.2348
67 E A -2.7527
68 Y A 0.0000
69 T A -1.4486
70 V A 0.0000
71 S A 0.0000
72 I A 0.0000
73 Y A 0.0000
74 G A 0.0000
75 V A -0.0097
76 L A 0.2845
77 G A -0.3421
78 S A 0.1967
79 Y A 0.8910
80 V A 0.4477
81 F A 0.0000
82 E A -1.7416
83 H A -1.7915
84 D A -1.6116
85 V A 0.6900
86 M A 0.5720
87 L A 0.7791
88 P A 0.0000
89 L A 0.1978
90 S A -0.2489
91 A A -0.7654
92 E A -2.1562
93 F A 0.0000
94 T A -1.6340
95 T A -1.9111
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Laboratory of Theory of Biopolymers 2018