| Chain sequence(s) |
A: GPLALNPEPELKSTDEYVTPTDLLYYAETDLLTEVGHPTKDIVVNGKVLLPKVSATQWRVFKLTLPDPNTMPLPSADFVNPETEILIWRLLAYKIKRYGPLGVGSYGHPNFNALGDVDNPTEPVHGTADDTVNMSWTPKLLQMYIIGNEPPIGKYVAPAAPAPGLPPGAEPPLEVVRDYIEHGDNADIGFGARDFKALEPRKNDVPDNILDTVTKVPDIEGMKAEPYGNRMFDYNEYEKSYNSRNLVRDGPELHPLPAAPPPSPLYVPPPPTSPYAVLPSTNYFTIPDRGEITEEDLLFNKPIFLEKTEGLNNGVLWGNKLYITVVDNTRDEIKTIETQLSTPEPNVYNPDYYVTSQLYTREYQLELIIQLCRIPLTPETLEYLRRLDPRILVDANLPEIPPIERPDPYAGRKFHEIDLTDKLSSDLSKSELGREYLNR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.1638 | |
| 2 | P | A | 0.5121 | |
| 3 | L | A | 1.6177 | |
| 4 | A | A | 0.9725 | |
| 5 | L | A | 1.0075 | |
| 6 | N | A | -0.9127 | |
| 7 | P | A | -1.6351 | |
| 8 | E | A | -2.5337 | |
| 9 | P | A | -2.2611 | |
| 10 | E | A | -2.3012 | |
| 11 | L | A | -0.8119 | |
| 12 | K | A | -1.4566 | |
| 13 | S | A | -1.5119 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.9894 | |
| 16 | E | A | -2.8338 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | T | A | -1.0269 | |
| 20 | P | A | -0.9363 | |
| 21 | T | A | 0.0000 | |
| 22 | D | A | -1.6017 | |
| 23 | L | A | -0.4523 | |
| 24 | L | A | -0.1313 | |
| 25 | Y | A | -0.1198 | |
| 26 | Y | A | -0.4712 | |
| 27 | A | A | 0.0000 | |
| 28 | E | A | -1.1698 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -1.3768 | |
| 31 | L | A | 0.0805 | |
| 32 | L | A | -0.0430 | |
| 33 | T | A | 0.1026 | |
| 34 | E | A | 0.2794 | |
| 35 | V | A | 0.9974 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.6380 | |
| 38 | P | A | 0.0000 | |
| 39 | T | A | -1.3692 | |
| 40 | K | A | -2.1941 | |
| 41 | D | A | -0.8308 | |
| 42 | I | A | 1.2973 | |
| 43 | V | A | 2.3201 | |
| 44 | V | A | 1.6208 | |
| 45 | N | A | -0.5605 | |
| 46 | G | A | -0.3710 | |
| 47 | K | A | -0.0901 | |
| 48 | V | A | 2.2675 | |
| 49 | L | A | 2.6218 | |
| 50 | L | A | 1.6366 | |
| 51 | P | A | 0.2247 | |
| 52 | K | A | -0.8149 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | A | A | 0.0000 | |
| 56 | T | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | K | A | -1.4691 | |
| 63 | L | A | 0.0000 | |
| 64 | T | A | -1.5004 | |
| 65 | L | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -0.8969 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.1076 | |
| 70 | T | A | -0.5124 | |
| 71 | M | A | -0.1229 | |
| 72 | P | A | -0.0642 | |
| 73 | L | A | 0.1147 | |
| 74 | P | A | -0.2076 | |
| 75 | S | A | -0.5336 | |
| 76 | A | A | -0.8306 | |
| 77 | D | A | -1.8070 | |
| 78 | F | A | -0.7588 | |
| 79 | V | A | -1.2525 | |
| 80 | N | A | -2.0480 | |
| 81 | P | A | -2.0686 | |
| 82 | E | A | -2.3396 | |
| 83 | T | A | -1.4792 | |
| 84 | E | A | -1.4170 | |
| 85 | I | A | 0.0000 | |
| 86 | L | A | 0.0000 | |
| 87 | I | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | -0.3235 | |
| 90 | L | A | 0.0000 | |
| 91 | L | A | -0.1360 | |
| 92 | A | A | 0.0000 | |
| 93 | Y | A | 0.0000 | |
| 94 | K | A | 0.0000 | |
| 95 | I | A | 0.0000 | |
| 96 | K | A | -0.4966 | |
| 97 | R | A | 0.0000 | |
| 98 | Y | A | 0.1647 | |
| 99 | G | A | -0.4441 | |
| 100 | P | A | -0.3400 | |
| 101 | L | A | 0.1761 | |
| 102 | G | A | 0.3759 | |
| 103 | V | A | 0.9545 | |
| 104 | G | A | 0.0000 | |
| 105 | S | A | 0.0224 | |
| 106 | Y | A | 0.0000 | |
| 107 | G | A | -0.8479 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | -1.3866 | |
| 110 | N | A | -2.1435 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | 0.0000 | |
| 113 | A | A | 0.0000 | |
| 114 | L | A | -0.5958 | |
| 115 | G | A | -0.8053 | |
| 116 | D | A | -1.7982 | |
| 117 | V | A | -1.4323 | |
| 118 | D | A | -2.9398 | |
| 119 | N | A | -2.7579 | |
| 120 | P | A | -1.8899 | |
| 121 | T | A | -1.5826 | |
| 122 | E | A | -2.0248 | |
| 123 | P | A | -0.5213 | |
| 124 | V | A | -0.3767 | |
| 125 | H | A | -0.6061 | |
| 126 | G | A | -1.2920 | |
| 127 | T | A | -1.0928 | |
| 128 | A | A | -0.9991 | |
| 129 | D | A | -2.1151 | |
| 130 | D | A | -1.4583 | |
| 131 | T | A | -1.2216 | |
| 132 | V | A | -0.6848 | |
| 133 | N | A | -1.4210 | |
| 134 | M | A | -0.6670 | |
| 135 | S | A | -0.5013 | |
| 136 | W | A | 0.0000 | |
| 137 | T | A | -0.0396 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | -0.8717 | |
| 140 | L | A | 0.0000 | |
| 141 | L | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | M | A | 0.0000 | |
| 144 | Y | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | I | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | N | A | 0.0000 | |
| 149 | E | A | -0.4282 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | I | A | -0.2492 | |
| 153 | G | A | 0.0000 | |
| 154 | K | A | -0.5284 | |
| 155 | Y | A | -0.0600 | |
| 156 | V | A | 0.6938 | |
| 157 | A | A | 0.0000 | |
| 158 | P | A | 0.1480 | |
| 159 | A | A | 0.2774 | |
| 160 | A | A | -0.1071 | |
| 161 | P | A | -0.2686 | |
| 162 | A | A | -0.1122 | |
| 163 | P | A | -0.3043 | |
| 164 | G | A | -0.2841 | |
| 165 | L | A | 0.0156 | |
| 166 | P | A | -0.4380 | |
| 167 | P | A | -0.6817 | |
| 168 | G | A | -0.7355 | |
| 169 | A | A | -0.8938 | |
| 170 | E | A | -1.5201 | |
| 171 | P | A | -0.8195 | |
| 172 | P | A | -0.3088 | |
| 173 | L | A | 0.8426 | |
| 174 | E | A | 0.1560 | |
| 175 | V | A | 1.0190 | |
| 176 | V | A | -0.0922 | |
| 177 | R | A | -1.6000 | |
| 178 | D | A | -1.0296 | |
| 179 | Y | A | -0.7260 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | -1.1032 | |
| 182 | H | A | -1.1883 | |
| 183 | G | A | -0.7077 | |
| 184 | D | A | -0.5840 | |
| 185 | N | A | 0.0000 | |
| 186 | A | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | -0.5389 | |
| 190 | F | A | 0.0000 | |
| 191 | G | A | -0.3133 | |
| 192 | A | A | -0.0156 | |
| 193 | R | A | -0.4177 | |
| 194 | D | A | -0.7975 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -2.6887 | |
| 197 | A | A | -1.2148 | |
| 198 | L | A | -0.9278 | |
| 199 | E | A | 0.0000 | |
| 200 | P | A | -2.1717 | |
| 201 | R | A | -3.0150 | |
| 202 | K | A | -3.4726 | |
| 203 | N | A | -2.1776 | |
| 204 | D | A | -1.3439 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | D | A | -1.5814 | |
| 208 | N | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | L | A | -1.6153 | |
| 211 | D | A | -2.2391 | |
| 212 | T | A | -1.1122 | |
| 213 | V | A | -0.4256 | |
| 214 | T | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | V | A | 0.0273 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | I | A | -0.9099 | |
| 220 | E | A | -2.2094 | |
| 221 | G | A | -1.6442 | |
| 222 | M | A | 0.0000 | |
| 223 | K | A | -2.1419 | |
| 224 | A | A | -1.2700 | |
| 225 | E | A | -1.1432 | |
| 226 | P | A | -0.4531 | |
| 227 | Y | A | -0.3395 | |
| 228 | G | A | 0.0000 | |
| 229 | N | A | -0.5788 | |
| 230 | R | A | 0.0000 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | D | A | -0.8565 | |
| 234 | Y | A | -0.6198 | |
| 235 | N | A | -1.0481 | |
| 236 | E | A | -1.5406 | |
| 237 | Y | A | -0.9289 | |
| 238 | E | A | -1.5775 | |
| 239 | K | A | -1.3034 | |
| 240 | S | A | -0.9542 | |
| 241 | Y | A | -0.8548 | |
| 242 | N | A | -1.7713 | |
| 243 | S | A | -1.8976 | |
| 244 | R | A | -2.9630 | |
| 245 | N | A | -2.0049 | |
| 246 | L | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | 0.0000 | |
| 249 | D | A | -1.0887 | |
| 250 | G | A | -0.6772 | |
| 251 | P | A | -0.6049 | |
| 252 | E | A | -0.3433 | |
| 253 | L | A | 0.4273 | |
| 254 | H | A | -0.4209 | |
| 255 | P | A | -0.1405 | |
| 256 | L | A | 1.0087 | |
| 257 | P | A | 0.3994 | |
| 258 | A | A | 0.5969 | |
| 259 | A | A | 0.4275 | |
| 260 | P | A | -0.2143 | |
| 261 | P | A | 0.0080 | |
| 262 | P | A | 0.0241 | |
| 263 | S | A | 0.5629 | |
| 264 | P | A | 0.7082 | |
| 265 | L | A | 1.9576 | |
| 266 | Y | A | 1.7805 | |
| 267 | V | A | 1.9465 | |
| 268 | P | A | 1.2494 | |
| 269 | P | A | 0.7137 | |
| 270 | P | A | -0.0721 | |
| 271 | P | A | -0.0337 | |
| 272 | T | A | -0.1569 | |
| 273 | S | A | 0.3684 | |
| 274 | P | A | 0.3829 | |
| 275 | Y | A | 1.5313 | |
| 276 | A | A | 1.3677 | |
| 277 | V | A | 2.2647 | |
| 278 | L | A | 1.6664 | |
| 279 | P | A | 0.5469 | |
| 280 | S | A | -0.1072 | |
| 281 | T | A | -0.0498 | |
| 282 | N | A | -0.6170 | |
| 283 | Y | A | 0.8492 | |
| 284 | F | A | 0.1746 | |
| 285 | T | A | -0.9198 | |
| 286 | I | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | D | A | -1.3129 | |
| 289 | R | A | 0.0000 | |
| 290 | G | A | -1.1535 | |
| 291 | E | A | -1.7104 | |
| 292 | I | A | -1.2134 | |
| 293 | T | A | -1.8694 | |
| 294 | E | A | -2.6871 | |
| 295 | E | A | -2.8216 | |
| 296 | D | A | -2.0004 | |
| 297 | L | A | -1.1905 | |
| 298 | L | A | -0.9408 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.1085 | |
| 301 | K | A | -1.5395 | |
| 302 | P | A | -0.7417 | |
| 303 | I | A | 0.0943 | |
| 304 | F | A | 0.0113 | |
| 305 | L | A | -1.0493 | |
| 306 | E | A | -2.4067 | |
| 307 | K | A | -3.0481 | |
| 308 | T | A | 0.0000 | |
| 309 | E | A | -2.0804 | |
| 310 | G | A | -1.5380 | |
| 311 | L | A | -0.9737 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | -1.5692 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | L | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | G | A | -0.8868 | |
| 319 | N | A | -0.7872 | |
| 320 | K | A | -0.8964 | |
| 321 | L | A | 0.0000 | |
| 322 | Y | A | 0.0000 | |
| 323 | I | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | 0.0000 | |
| 331 | D | A | 0.0000 | |
| 332 | E | A | -0.7561 | |
| 333 | I | A | -0.4233 | |
| 334 | K | A | -1.0760 | |
| 335 | T | A | -0.5294 | |
| 336 | I | A | 0.1109 | |
| 337 | E | A | -1.0918 | |
| 338 | T | A | -0.3446 | |
| 339 | Q | A | -0.6927 | |
| 340 | L | A | 0.8430 | |
| 341 | S | A | 0.0179 | |
| 342 | T | A | -0.4408 | |
| 343 | P | A | -0.9404 | |
| 344 | E | A | -1.6100 | |
| 345 | P | A | -1.0668 | |
| 346 | N | A | -0.7517 | |
| 347 | V | A | 1.0059 | |
| 348 | Y | A | 1.0558 | |
| 349 | N | A | -0.3069 | |
| 350 | P | A | -0.3812 | |
| 351 | D | A | -1.2657 | |
| 352 | Y | A | -0.5516 | |
| 353 | Y | A | 0.1239 | |
| 354 | V | A | 0.6676 | |
| 355 | T | A | -0.2319 | |
| 356 | S | A | -0.3834 | |
| 357 | Q | A | -0.7835 | |
| 358 | L | A | -0.0697 | |
| 359 | Y | A | 0.0000 | |
| 360 | T | A | 0.0338 | |
| 361 | R | A | 0.0000 | |
| 362 | E | A | -0.0373 | |
| 363 | Y | A | 0.0000 | |
| 364 | Q | A | -0.4294 | |
| 365 | L | A | 0.0000 | |
| 366 | E | A | 0.0000 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | I | A | 0.0000 | |
| 370 | Q | A | -0.2804 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | R | A | -0.6771 | |
| 374 | I | A | 0.0000 | |
| 375 | P | A | -0.8063 | |
| 376 | L | A | -0.9661 | |
| 377 | T | A | -0.9124 | |
| 378 | P | A | -1.4722 | |
| 379 | E | A | -2.4119 | |
| 380 | T | A | 0.0000 | |
| 381 | L | A | -1.6902 | |
| 382 | E | A | -3.0730 | |
| 383 | Y | A | 0.0000 | |
| 384 | L | A | 0.0000 | |
| 385 | R | A | -2.8689 | |
| 386 | R | A | -2.1629 | |
| 387 | L | A | -1.1767 | |
| 388 | D | A | -1.2423 | |
| 389 | P | A | -1.7559 | |
| 390 | R | A | -1.2523 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | 0.0000 | |
| 393 | V | A | -1.4001 | |
| 394 | D | A | -1.7804 | |
| 395 | A | A | -1.4905 | |
| 396 | N | A | -2.0157 | |
| 397 | L | A | -1.6441 | |
| 398 | P | A | -1.5645 | |
| 399 | E | A | -1.9212 | |
| 400 | I | A | -0.6700 | |
| 401 | P | A | -0.3942 | |
| 402 | P | A | -0.4504 | |
| 403 | I | A | 0.5944 | |
| 404 | E | A | -1.5838 | |
| 405 | R | A | -1.7904 | |
| 406 | P | A | -1.4421 | |
| 407 | D | A | -1.7142 | |
| 408 | P | A | -1.0355 | |
| 409 | Y | A | -0.9086 | |
| 410 | A | A | -1.0527 | |
| 411 | G | A | -1.3013 | |
| 412 | R | A | -1.8204 | |
| 413 | K | A | -2.4842 | |
| 414 | F | A | -1.6581 | |
| 415 | H | A | -1.6389 | |
| 416 | E | A | -2.5950 | |
| 417 | I | A | 0.0000 | |
| 418 | D | A | -2.8858 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.9268 | |
| 421 | D | A | -2.8140 | |
| 422 | K | A | -2.7056 | |
| 423 | L | A | -1.2034 | |
| 424 | S | A | -1.0865 | |
| 425 | S | A | -0.5558 | |
| 426 | D | A | -1.4306 | |
| 427 | L | A | 0.0000 | |
| 428 | S | A | -1.6897 | |
| 429 | K | A | -2.4686 | |
| 430 | S | A | 0.0000 | |
| 431 | E | A | -1.9058 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -2.3568 | |
| 435 | E | A | -1.7419 | |
| 436 | Y | A | -0.6911 | |
| 437 | L | A | -0.2150 | |
| 438 | N | A | -1.8831 | |
| 439 | R | A | -2.1856 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine